PDB Chemical Component 8DQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8DQ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C16 |
1.470 |
1.469 |
| N1 |
C17 |
1.474 |
1.469 |
| C16 |
C15 |
1.509 |
1.528 |
| C17 |
C18 |
1.506 |
1.533 |
| C15 |
N |
1.465 |
1.471 |
| C18 |
N |
1.465 |
1.470 |
| N |
C2 |
1.410 |
1.372 |
| C11 |
C10 |
1.385 |
1.380 |
| C11 |
C12 |
1.377 |
1.383 |
| C2 |
C1 |
1.372 |
1.363 |
| C2 |
O1 |
1.385 |
1.340 |
| C10 |
C9 |
1.393 |
1.394 |
| C1 |
C |
1.441 |
1.408 |
| O1 |
C3 |
1.378 |
1.349 |
| C12 |
C13 |
1.375 |
1.383 |
| C |
O |
1.236 |
1.221 |
| C |
C8 |
1.476 |
1.478 |
| C3 |
C8 |
1.397 |
1.401 |
| C3 |
C4 |
1.401 |
1.400 |
| C9 |
C4 |
1.492 |
1.484 |
| C9 |
C14 |
1.393 |
1.394 |
| C8 |
C7 |
1.396 |
1.395 |
| C4 |
C5 |
1.392 |
1.390 |
| C13 |
C14 |
1.385 |
1.380 |
| C7 |
C6 |
1.387 |
1.379 |
| C5 |
C6 |
1.385 |
1.385 |
| C7 |
H1 |
1.080 |
1.079 |
| C6 |
H2 |
1.080 |
1.080 |
| C5 |
H3 |
1.080 |
1.080 |
| C14 |
H4 |
1.080 |
1.080 |
| C13 |
H5 |
1.080 |
1.080 |
| C12 |
H6 |
1.079 |
1.079 |
| C11 |
H7 |
1.080 |
1.080 |
| C10 |
H8 |
1.080 |
1.080 |
| C1 |
H9 |
1.080 |
1.080 |
| C18 |
H10 |
1.100 |
1.090 |
| C18 |
H11 |
1.100 |
1.089 |
| C17 |
H12 |
1.100 |
1.090 |
| C17 |
H13 |
1.100 |
1.090 |
| N1 |
H14 |
1.000 |
1.009 |
| C16 |
H16 |
1.100 |
1.090 |
| C16 |
H17 |
1.100 |
1.090 |
| C15 |
H18 |
1.101 |
1.089 |
| C15 |
H19 |
1.100 |
1.090 |
Bond Angles for 8DQ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N1 |
C16 |
C15 |
111.8 |
109.4 |
| C16 |
N1 |
H14 |
108.6 |
111.0 |
| N1 |
C16 |
H16 |
108.9 |
109.5 |
| N1 |
C16 |
H17 |
108.9 |
109.5 |
| N1 |
C17 |
H12 |
109.0 |
109.5 |
| N1 |
C17 |
H13 |
109.0 |
109.5 |
| C15 |
C16 |
H16 |
108.9 |
109.6 |
| C15 |
C16 |
H17 |
108.9 |
109.3 |
| C16 |
C15 |
H18 |
110.0 |
109.6 |
| C16 |
C15 |
H19 |
110.0 |
109.6 |
| C17 |
C18 |
H10 |
109.7 |
109.6 |
| C17 |
C18 |
H11 |
109.8 |
109.8 |
| C10 |
C11 |
H7 |
119.9 |
120.0 |
| C11 |
C10 |
H8 |
119.6 |
120.1 |
| C11 |
C12 |
H6 |
120.1 |
119.9 |
| C2 |
C1 |
H9 |
120.4 |
120.2 |
| C12 |
C13 |
H5 |
119.8 |
120.0 |
| C |
C8 |
C7 |
121.6 |
121.3 |
| C9 |
C14 |
H4 |
119.6 |
120.0 |
| C8 |
C7 |
C6 |
120.3 |
119.8 |
| C8 |
C7 |
H1 |
119.8 |
120.1 |
| C4 |
C5 |
H3 |
119.7 |
119.7 |
| C13 |
C14 |
H4 |
119.7 |
120.1 |
| C6 |
C7 |
H1 |
119.9 |
120.1 |
| C7 |
C6 |
H2 |
119.7 |
119.8 |
| C5 |
C6 |
H2 |
119.7 |
119.8 |
| H10 |
C18 |
H11 |
109.5 |
109.6 |
| H12 |
C17 |
H13 |
109.5 |
109.5 |
| H16 |
C16 |
H17 |
109.5 |
109.5 |
| H18 |
C15 |
H19 |
109.5 |
109.8 |
Torsion Angles for 8DQ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C16 |
N1 |
C17 |
H12 |
61.4 |
176.9 |
| C16 |
N1 |
C17 |
H13 |
180.9 |
56.8 |
| C15 |
C16 |
N1 |
H16 |
239.6 |
239.9 |
| C15 |
C16 |
N1 |
H17 |
120.3 |
119.8 |
| N1 |
C16 |
C15 |
H18 |
70.7 |
186.4 |
| N1 |
C16 |
C15 |
H19 |
191.4 |
65.8 |
| H16 |
C16 |
N1 |
H17 |
240.7 |
239.9 |
| N1 |
C17 |
C18 |
H10 |
167.8 |
294.1 |
| N1 |
C17 |
C18 |
H11 |
288.2 |
173.6 |
| H12 |
C17 |
N1 |
H13 |
240.5 |
120.1 |
| C15 |
C16 |
N1 |
H14 |
180.3 |
187.2 |
| N1 |
C16 |
C15 |
H16 |
120.3 |
120.0 |
| N1 |
C16 |
C15 |
H17 |
239.6 |
240.1 |
| H16 |
C16 |
C15 |
H17 |
119.3 |
120.0 |
| H18 |
C15 |
C16 |
H19 |
239.3 |
120.6 |
| H10 |
C18 |
C17 |
H11 |
239.6 |
120.5 |
| N |
C2 |
C1 |
H9 |
355.2 |
359.5 |
| C10 |
C11 |
C12 |
H6 |
180.1 |
179.7 |
| C11 |
C12 |
C13 |
H5 |
179.8 |
180.0 |
| C10 |
C9 |
C14 |
H4 |
180.2 |
180.2 |
| C12 |
C13 |
C14 |
H4 |
180.1 |
180.1 |
| C |
C8 |
C7 |
C6 |
179.5 |
180.0 |
| C |
C8 |
C7 |
H1 |
359.5 |
359.9 |
| C3 |
C8 |
C7 |
H1 |
180.0 |
179.9 |
| C3 |
C4 |
C5 |
H3 |
180.8 |
180.0 |
| C9 |
C4 |
C5 |
H3 |
2.8 |
359.9 |
| C13 |
C14 |
C9 |
H4 |
180.0 |
180.1 |
| C6 |
C7 |
C8 |
H1 |
180.0 |
180.1 |
| C8 |
C7 |
C6 |
H2 |
179.7 |
180.0 |
| C4 |
C5 |
C6 |
H2 |
179.9 |
180.0 |
| C9 |
C14 |
C13 |
H4 |
180.0 |
179.9 |
| C8 |
C7 |
C6 |
H1 |
180.0 |
179.9 |
| C5 |
C6 |
C7 |
H2 |
180.0 |
180.0 |
| C5 |
C6 |
C7 |
H1 |
179.7 |
180.1 |
| C7 |
C6 |
C5 |
H2 |
180.0 |
180.0 |
| C8 |
C7 |
H1 |
C6 |
180.0 |
180.1 |
| H1 |
C7 |
C6 |
H2 |
359.7 |
0.1 |
| H2 |
C6 |
C7 |
H1 |
359.7 |
0.1 |
| H3 |
C5 |
C6 |
H2 |
360.0 |
0.0 |
| H5 |
C13 |
C14 |
H4 |
0.1 |
0.0 |
| H6 |
C12 |
C13 |
H5 |
359.8 |
0.1 |
| H7 |
C11 |
C10 |
H8 |
0.2 |
359.5 |
| H7 |
C11 |
C12 |
H6 |
0.1 |
0.2 |
| H8 |
C10 |
C11 |
H7 |
0.2 |
359.5 |
| C17 |
C18 |
H10 |
H11 |
120.5 |
239.4 |
| C17 |
C18 |
H11 |
H10 |
239.5 |
120.4 |
| N1 |
C17 |
H12 |
H13 |
119.2 |
239.9 |
| H12 |
C17 |
C18 |
H10 |
47.5 |
54.1 |
| H12 |
C17 |
C18 |
H11 |
167.9 |
293.6 |
| N1 |
C17 |
H13 |
H12 |
240.8 |
120.1 |
| H13 |
C17 |
C18 |
H10 |
288.0 |
174.2 |
| H13 |
C17 |
C18 |
H11 |
48.4 |
53.7 |
| H14 |
N1 |
C16 |
C15 |
180.3 |
187.2 |
| H14 |
N1 |
C16 |
H16 |
300.6 |
307.3 |
| H14 |
N1 |
C16 |
H17 |
59.9 |
67.4 |
| H14 |
N1 |
C17 |
H12 |
300.9 |
52.7 |
| H14 |
N1 |
C17 |
H13 |
60.4 |
292.6 |
| N1 |
C16 |
H16 |
C15 |
237.9 |
240.0 |
| H16 |
C16 |
N1 |
H14 |
300.6 |
307.3 |
| N1 |
C16 |
H16 |
H17 |
118.9 |
120.1 |
| C15 |
C16 |
H16 |
H17 |
241.1 |
240.1 |
| H16 |
C16 |
C15 |
H18 |
310.4 |
66.4 |
| H16 |
C16 |
C15 |
H19 |
71.1 |
305.8 |
| N1 |
C16 |
H17 |
C15 |
122.2 |
119.9 |
| H17 |
C16 |
N1 |
H14 |
59.9 |
67.4 |
| N1 |
C16 |
H17 |
H16 |
241.1 |
239.9 |
| C15 |
C16 |
H17 |
H16 |
118.9 |
120.1 |
| H17 |
C16 |
C15 |
H18 |
191.1 |
306.3 |
| H17 |
C16 |
C15 |
H19 |
311.8 |
185.7 |
| H18 |
C15 |
C16 |
H16 |
310.4 |
66.4 |
| H18 |
C15 |
C16 |
H17 |
191.1 |
306.3 |
| C16 |
C15 |
H18 |
H19 |
121.0 |
239.6 |
| H19 |
C15 |
C16 |
H16 |
71.1 |
305.8 |
| H19 |
C15 |
C16 |
H17 |
311.8 |
185.7 |
| C16 |
C15 |
H19 |
H18 |
239.0 |
120.5 |