PDB Chemical Component 8C9

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 8C9

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C35 C2 1.317 1.310
O1 C1 1.436 1.429
C2 C1 1.528 1.512
C2 C3 1.527 1.507
C1 C6 1.539 1.534
C3 C4 1.528 1.535
C3 O2 1.461 1.429
C4 C5 1.526 1.512
C6 C5 1.521 1.512
C5 C7 1.347 1.328
C7 C8 1.451 1.472
C29 C13 1.552 1.531
C8 C9 1.362 1.328
C9 C10 1.528 1.522
C9 C14 1.518 1.499
O3 C22 1.248 1.212
C11 C10 1.565 1.528
C11 C12 1.550 1.537
C13 C14 1.521 1.555
C13 C12 1.529 1.511
C13 C17 1.510 1.521
C30 C18 1.546 1.530
C28 C27 1.402 1.372
C28 C23 1.399 1.400
C18 C17 1.543 1.529
C18 C19 1.515 1.530
C15 C14 1.530 1.533
C15 C16 1.517 1.555
C27 C26 1.393 1.390
C20 C19 1.551 1.530
C20 C21 1.512 1.530
C22 C23 1.520 1.469
C22 C21 1.531 1.507
C16 C17 1.543 1.551
C23 C24 1.411 1.401
C19 C31 1.542 1.530
C26 O4 1.355 1.357
C26 C25 1.398 1.391
C24 C25 1.395 1.371
C31 C32 1.517 1.531
C32 C33 1.506 1.530
C33 C34 1.512 1.531
C28 H1 1.081 1.079
C27 H2 1.080 1.080
O4 H3 0.950 0.967
C25 H4 1.080 1.080
C24 H5 1.080 1.080
C21 H6 1.100 1.090
C21 H7 1.099 1.090
C20 H8 1.100 1.089
C20 H9 1.100 1.091
C19 H10 1.100 1.089
C31 H11 1.100 1.090
C31 H12 1.100 1.090
C32 H13 1.100 1.090
C32 H14 1.100 1.090
C33 H15 1.100 1.090
C33 H16 1.100 1.090
C34 H17 1.100 1.090
C34 H18 1.099 1.090
C34 H19 1.100 1.090
C18 H20 1.100 1.090
C30 H21 1.100 1.090
C30 H22 1.100 1.091
C30 H23 1.100 1.090
C17 H24 1.100 1.090
C29 H25 1.100 1.091
C29 H26 1.100 1.089
C29 H27 1.100 1.090
C12 H28 1.100 1.090
C12 H29 1.100 1.089
C11 H30 1.100 1.090
C11 H31 1.100 1.090
C10 H32 1.100 1.090
C10 H33 1.100 1.090
C16 H34 1.100 1.091
C16 H35 1.100 1.090
C15 H36 1.100 1.090
C15 H37 1.100 1.090
C14 H38 1.100 1.090
C8 H39 1.080 1.080
C7 H40 1.080 1.080
C6 H41 1.100 1.089
C6 H42 1.100 1.089
C1 H43 1.100 1.090
O1 H44 0.950 0.967
C4 H45 1.100 1.090
C4 H46 1.100 1.089
C3 H47 1.100 1.090
O2 H48 0.950 0.967
C35 H49 1.080 1.080
C35 H50 1.080 1.080

Bond Angles for 8C9

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 C1 H43 108.8 109.6
C2 C1 H43 107.6 109.6
C2 C3 H47 109.6 109.8
C1 C6 H41 108.6 109.6
C1 C6 H42 108.6 109.8
C3 C4 H45 108.9 109.5
C3 C4 H46 108.9 109.8
O2 C3 H47 110.5 109.7
C3 O2 H48 109.5 114.0
C5 C7 H40 117.6 120.0
C7 C8 H39 118.4 120.0
C29 C13 C14 110.5 109.2
C29 C13 C12 111.0 108.8
C9 C10 H32 109.9 109.2
C9 C10 H33 109.9 109.2
C9 C14 H38 105.3 111.1
O3 C22 C23 119.7 120.0
O3 C22 C21 122.0 120.0
C10 C11 H30 107.6 109.0
C10 C11 H31 107.6 109.0
C11 C10 H32 110.0 109.2
C11 C10 H33 110.0 109.2
C11 C12 H28 109.0 109.8
C11 C12 H29 109.0 110.0
C12 C13 C14 106.1 107.6
C13 C14 C15 108.4 101.2
C13 C14 H38 105.2 110.9
C13 C12 H28 109.0 109.8
C13 C12 H29 109.0 109.8
C13 C17 H24 106.7 110.3
C30 C18 C17 115.0 109.5
C30 C18 H20 105.7 109.4
C28 C27 C26 119.7 120.1
C27 C28 H1 119.7 120.1
C28 C27 H2 120.1 119.9
C28 C23 C24 118.9 119.8
C17 C18 H20 105.7 109.4
C18 C17 H24 106.3 110.3
C18 C19 H10 107.9 109.5
C14 C15 H36 111.5 110.8
C14 C15 H37 111.5 110.8
C15 C14 H38 105.1 110.6
C15 C16 H34 109.7 110.1
C15 C16 H35 109.7 110.2
C27 C26 O4 118.2 119.9
C27 C26 C25 120.5 120.2
C26 C27 H2 120.2 119.9
C20 C19 C31 111.9 109.5
C19 C20 H8 109.1 109.5
C19 C20 H9 109.1 109.5
C20 C19 H10 107.4 109.5
C20 C21 H6 108.7 109.5
C20 C21 H7 108.7 109.4
C23 C22 C21 118.3 120.0
C22 C23 C24 122.4 120.1
C22 C21 H6 108.6 109.5
C22 C21 H7 108.7 109.5
C16 C17 H24 106.3 110.3
C23 C24 C25 120.7 119.9
C23 C24 H5 119.7 120.1
C19 C31 C32 110.1 109.4
C31 C19 H10 107.5 109.5
C19 C31 H11 109.3 109.4
C19 C31 H12 109.3 109.5
O4 C26 C25 121.3 119.8
C26 O4 H3 109.5 114.0
C26 C25 H4 120.2 119.9
C24 C25 H4 120.2 119.9
C31 C32 C33 107.8 109.4
C32 C31 H11 109.3 109.5
C32 C31 H12 109.3 109.5
C31 C32 H13 109.9 109.4
C31 C32 H14 109.9 109.4
C32 C33 C34 114.9 109.4
C33 C32 H13 109.9 109.5
C33 C32 H14 109.9 109.6
C32 C33 H15 108.1 109.5
C32 C33 H16 108.1 109.5
C34 C33 H15 108.1 109.5
C34 C33 H16 108.1 109.5
C33 C34 H17 109.5 109.4
C33 C34 H18 109.5 109.5
C33 C34 H19 109.5 109.5
H6 C21 H7 109.5 109.5
H8 C20 H9 109.5 109.5
H11 C31 H12 109.4 109.5
H13 C32 H14 109.5 109.5
H15 C33 H16 109.5 109.5
H17 C34 H18 109.5 109.5
H17 C34 H19 109.4 109.5
H18 C34 H19 109.5 109.5
H21 C30 H22 109.5 109.4
H21 C30 H23 109.5 109.4
H22 C30 H23 109.5 109.4
H25 C29 H26 109.5 109.5
H25 C29 H27 109.4 109.5
H26 C29 H27 109.5 109.5
H28 C12 H29 109.5 109.9
H30 C11 H31 109.5 108.9
H32 C10 H33 109.5 109.2
H34 C16 H35 109.5 110.0
H36 C15 H37 109.5 110.8
H41 C6 H42 109.4 109.7
H45 C4 H46 109.4 109.6
H49 C35 H50 120.0 120.0

Torsion Angles for 8C9

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C35 C2 C1 H43 117.1 5.0
C35 C2 C3 H47 0.3 115.4
C2 C1 O1 H43 119.0 120.4
O1 C1 C6 H41 316.7 169.8
O1 C1 C6 H42 75.6 49.3
O1 C1 C2 H43 240.3 239.6
C2 C1 C6 H41 81.4 289.8
C2 C1 C6 H42 200.3 169.2
C3 C2 C1 H43 295.7 184.7
C2 C3 C4 H45 170.8 190.8
C2 C3 C4 H46 290.1 70.3
O2 C3 C2 H47 240.7 239.5
C2 C3 O2 H48 180.0 60.9
H41 C6 C1 H42 241.1 120.5
H45 C4 C3 H46 240.7 120.4
C2 C3 O2 H47 118.7 120.6
O2 C3 C4 H45 53.9 71.1
O2 C3 C4 H46 173.1 310.7
C4 C5 C7 H40 354.8 185.8
C6 C5 C7 H40 178.6 6.1
C5 C7 C8 H39 31.1 4.9
C12 C13 C29 C14 117.4 117.2
C29 C13 C14 C15 282.2 289.3
C29 C13 C14 H38 170.2 171.9
C29 C13 C12 H28 176.9 69.4
C29 C13 C12 H29 57.5 190.2
C29 C13 C17 H24 198.1 204.9
C8 C9 C10 H32 251.1 9.4
C8 C9 C10 H33 11.7 250.1
C8 C9 C14 H38 129.0 117.9
C9 C10 C11 H30 165.2 288.0
C9 C10 C11 H31 283.0 169.2
C11 C10 C9 H32 240.3 120.3
C11 C10 C9 H33 119.7 239.7
H32 C10 C9 H33 239.4 119.3
C14 C9 C10 H32 71.1 189.4
C14 C9 C10 H33 191.7 70.1
C13 C14 C9 H38 113.6 120.3
C9 C14 C15 H36 315.9 85.4
C9 C14 C15 H37 78.7 322.0
C15 C14 C9 H38 242.0 231.8
C23 C22 O3 C21 181.8 180.3
O3 C22 C23 C24 179.5 360.0
O3 C22 C21 H6 214.7 120.0
O3 C22 C21 H7 95.7 240.0
C9 C10 C11 H32 119.7 239.7
C9 C10 C11 H33 240.3 120.3
C10 C11 C12 H28 69.1 181.5
C10 C11 C12 H29 188.6 60.4
H30 C11 C10 H31 242.2 118.8
H32 C10 C11 H33 120.6 240.7
C11 C12 C13 C14 57.3 68.0
C13 C12 C11 H28 239.7 119.4
C13 C12 C11 H29 120.3 240.5
H28 C12 C11 H29 240.6 121.0
C29 C13 C14 C12 120.4 117.9
C9 C14 C13 H38 246.4 239.5
C14 C13 C12 H28 296.9 187.5
C14 C13 C12 H29 177.5 308.4
C14 C13 C17 H24 80.9 88.8
C13 C14 C15 H36 85.7 199.4
C13 C14 C15 H37 208.5 76.1
C15 C14 C13 H38 112.0 117.4
C29 C13 C12 C14 240.0 241.8
C11 C12 C13 H28 120.3 240.5
C11 C12 C13 H29 239.7 119.6
C12 C13 C14 C15 161.8 171.4
C12 C13 C14 H38 49.8 54.0
C12 C13 C17 H24 327.7 330.1
H28 C12 C13 H29 119.4 239.1
C13 C17 C18 H20 69.5 54.1
C18 C17 C13 H24 118.0 122.1
C16 C17 C13 H24 246.8 241.1
C17 C18 C30 H20 116.1 120.0
C30 C18 C17 H24 71.6 56.3
C30 C18 C19 H10 184.1 182.4
C27 C28 C23 C24 359.1 0.3
C28 C27 C26 O4 180.0 180.0
C28 C27 C26 C25 359.4 360.0
C26 C27 C28 H2 180.0 180.0
C28 C23 C22 C21 182.6 0.6
C22 C23 C28 C24 178.7 179.7
C28 C23 C24 C25 0.2 359.5
C28 C23 C24 H5 180.3 179.7
C13 C17 C18 H24 241.7 237.9
C30 C18 C17 H20 243.9 240.0
C17 C18 C19 H10 314.7 302.4
C16 C17 C18 H24 117.1 122.1
C18 C19 C20 H8 293.1 304.4
C18 C19 C20 H9 52.6 184.4
C20 C19 C18 H10 242.4 240.0
C31 C19 C18 H10 117.4 120.0
C18 C19 C31 H11 352.6 305.5
C18 C19 C31 H12 112.3 65.5
C9 C14 C15 H38 118.1 128.4
C13 C14 C15 H38 247.9 242.4
C14 C15 C16 H34 131.0 264.9
C14 C15 C16 H35 251.3 143.4
H36 C15 C14 H37 237.2 123.4
C13 C14 C15 C16 327.1 317.8
C15 C16 C17 H24 260.3 245.0
H34 C16 C15 H35 239.7 121.5
C26 C27 C28 H1 181.1 180.1
C28 C27 C26 H2 180.0 180.0
O4 C26 C27 C25 180.5 180.1
C27 C26 O4 H3 180.0 90.0
C27 C26 C25 H4 179.9 180.0
C18 C19 C20 H10 117.9 120.0
C19 C20 C21 H6 296.4 54.7
C19 C20 C21 H7 55.5 294.8
C20 C19 C31 C32 107.8 65.6
C31 C19 C20 H10 242.2 240.0
C20 C19 C31 H11 227.9 185.5
C20 C19 C31 H12 347.7 305.6
H8 C20 C19 H9 240.4 120.0
C22 C21 C20 H6 239.5 120.0
C22 C21 C20 H7 120.5 240.0
H6 C21 C20 H7 240.9 120.0
O3 C22 C23 C21 178.3 179.7
C28 C23 C22 C24 181.4 180.3
C23 C22 C21 H6 33.0 299.7
C23 C22 C21 H7 274.0 59.7
C22 C23 C24 C25 181.6 179.8
C22 C23 C24 H5 1.6 0.0
O3 C22 C21 C23 181.7 180.3
C20 C21 C22 H6 120.5 240.0
C20 C21 C22 H7 239.5 120.0
C21 C22 C23 C24 1.2 180.3
H6 C21 C22 H7 119.0 240.0
C13 C17 C16 H24 113.4 118.9
C16 C17 C18 H20 304.8 298.4
C18 C17 C16 H24 242.9 237.9
C24 C23 C22 C21 1.2 180.3
C23 C24 C25 H4 180.3 180.3
C18 C19 C31 H10 242.4 240.0
C31 C19 C20 H8 57.4 64.4
C31 C19 C20 H9 176.9 304.4
C20 C19 C31 H10 117.7 120.0
C19 C31 C32 C33 226.1 184.5
C32 C31 C19 H11 239.9 240.0
C32 C31 C19 H12 120.1 120.0
C19 C31 C32 H13 345.8 304.5
C19 C31 C32 H14 106.3 64.4
H11 C31 C19 H12 240.2 240.0
C27 C26 O4 C25 179.5 179.9
O4 C26 C27 H2 360.0 360.0
O4 C26 C25 H4 359.3 359.9
C27 C26 C25 O4 180.6 180.1
C25 C26 C27 H2 179.4 179.9
C23 C24 C25 C26 0.3 0.5
C25 C26 O4 H3 0.6 270.0
C24 C25 C26 H4 180.0 179.8
C23 C24 C25 H5 180.0 180.3
C26 C25 C24 H4 180.0 180.2
C32 C31 C19 H10 350.1 305.5
C19 C31 C32 H11 120.1 120.0
C19 C31 C32 H12 239.9 240.0
C31 C32 C33 C34 271.9 180.0
C33 C32 C31 H13 240.3 240.0
C33 C32 C31 H14 119.7 120.1
C31 C32 C33 H15 32.7 300.0
C31 C32 C33 H16 151.1 60.0
H11 C31 C32 H12 119.8 120.0
H13 C32 C31 H14 239.5 240.1
C33 C32 C31 H11 106.0 64.5
C33 C32 C31 H12 346.2 304.5
C31 C32 C33 H13 119.7 120.0
C31 C32 C33 H14 240.3 240.0
C34 C33 C32 H15 239.2 240.0
C34 C33 C32 H16 120.8 120.0
C32 C33 C34 H17 180.0 180.0
C32 C33 C34 H18 300.0 300.0
C32 C33 C34 H19 60.0 60.0
H13 C32 C33 H14 120.5 120.1
H15 C33 C32 H16 241.6 239.9
C34 C33 C32 H13 152.2 60.0
C34 C33 C32 H14 31.6 300.0
C32 C33 C34 H15 120.8 120.0
C32 C33 C34 H16 239.2 240.0
H15 C33 C34 H16 118.4 120.0
H17 C34 C33 H18 240.0 240.0
H17 C34 C33 H19 120.0 120.0
H18 C34 C33 H19 240.0 240.0
H1 C28 C27 C26 181.1 180.1
H1 C28 C27 H2 1.1 0.1
H1 C28 C23 C24 179.1 180.2
C28 C27 H2 C26 180.0 180.0
H2 C27 C28 H1 1.1 0.1
H2 C27 C26 O4 360.0 360.0
H2 C27 C26 C25 179.4 179.9
H3 O4 C26 C25 0.6 270.0
C23 C24 H5 C25 180.0 179.7
H5 C24 C25 H4 0.3 0.0
C20 C21 H6 H7 118.5 240.1
C22 C21 H6 H7 241.5 120.0
C20 C21 H7 H6 241.5 120.0
C22 C21 H7 H6 118.5 240.0
H8 C20 C19 C31 57.4 64.4
C19 C20 H8 H9 119.3 240.0
H8 C20 C19 H10 175.2 184.4
H8 C20 C21 H6 176.2 174.8
H8 C20 C21 H7 295.3 54.8
H9 C20 C19 C31 176.9 304.4
C19 C20 H9 H8 240.7 120.0
H9 C20 C19 H10 294.7 64.4
H9 C20 C21 H6 56.6 294.8
H9 C20 C21 H7 175.7 174.8
C20 C19 H10 C31 239.4 240.0
H10 C19 C20 H8 175.2 184.4
H10 C19 C20 H9 294.7 64.4
H10 C19 C31 C32 350.1 305.5
H10 C19 C31 H11 110.2 65.5
H10 C19 C31 H12 229.9 185.6
C19 C31 H11 C32 239.4 240.0
H11 C31 C19 H10 110.2 65.5
C19 C31 H11 H12 119.7 120.0
H11 C31 C32 C33 106.0 64.5
C32 C31 H11 H12 240.3 240.0
H11 C31 C32 H13 225.7 184.5
H11 C31 C32 H14 346.2 304.4
C19 C31 H12 C32 120.6 120.0
H12 C31 C19 H10 229.9 185.6
C19 C31 H12 H11 240.3 240.0
H12 C31 C32 C33 346.2 304.5
C32 C31 H12 H11 119.7 120.0
H12 C31 C32 H13 105.9 64.5
H12 C31 C32 H14 226.5 184.4
C31 C32 H13 C33 241.6 240.0
H13 C32 C31 H11 225.7 184.5
H13 C32 C31 H12 105.9 64.5
C31 C32 H13 H14 120.8 119.9
H13 C32 C33 C34 152.2 60.0
C33 C32 H13 H14 239.2 239.9
H13 C32 C33 H15 273.0 180.0
H13 C32 C33 H16 31.4 300.1
C31 C32 H14 C33 118.4 120.0
H14 C32 C31 H11 346.2 304.4
H14 C32 C31 H12 226.5 184.4
C31 C32 H14 H13 239.2 240.1
H14 C32 C33 C34 31.6 300.0
C33 C32 H14 H13 120.8 120.1
H14 C32 C33 H15 152.4 59.9
H14 C32 C33 H16 270.8 180.0
C32 C33 H15 C34 235.1 240.1
H15 C33 C32 H13 273.0 180.0
H15 C33 C32 H14 152.4 59.9
C32 C33 H15 H16 117.5 120.1
C34 C33 H15 H16 242.5 240.0
H15 C33 C34 H17 59.2 60.0
H15 C33 C34 H18 179.2 180.0
H15 C33 C34 H19 299.2 300.0
C32 C33 H16 C34 124.9 119.9
H16 C33 C32 H13 31.4 300.1
H16 C33 C32 H14 270.8 180.0
C32 C33 H16 H15 242.5 239.9
C34 C33 H16 H15 117.5 120.0
H16 C33 C34 H17 300.8 300.0
H16 C33 C34 H18 60.8 60.0
H16 C33 C34 H19 180.8 180.0
H17 C34 C33 H15 59.2 60.0
H17 C34 C33 H16 300.8 300.0
C33 C34 H17 H18 120.0 120.0
C33 C34 H17 H19 240.0 240.0
H18 C34 H17 H19 120.0 120.0
H18 C34 C33 H15 179.2 180.0
H18 C34 C33 H16 60.8 60.0
C33 C34 H18 H17 239.9 240.0
C33 C34 H18 H19 120.0 120.0
H17 C34 H18 H19 240.1 240.0
H19 C34 C33 H15 299.2 300.0
H19 C34 C33 H16 180.8 180.0
C33 C34 H19 H17 120.0 120.0
C33 C34 H19 H18 240.0 240.0
H17 C34 H19 H18 120.0 120.0
C30 C18 H20 C17 122.3 120.0
H20 C18 C17 H24 187.7 176.3
H20 C18 C19 H10 69.6 62.4
H21 C30 C18 C17 180.0 180.0
H21 C30 C18 H20 63.9 60.0
H22 C30 H21 H23 120.0 119.9
H22 C30 C18 C17 300.0 300.0
H22 C30 C18 H20 183.9 180.0
H21 C30 H22 H23 240.0 240.1
H23 C30 C18 C17 60.0 60.0
H23 C30 C18 H20 303.9 300.0
H21 C30 H23 H22 120.0 119.9
H24 C17 C18 H20 187.7 176.3
H25 C29 C13 C14 180.0 66.5
H25 C29 C13 C12 297.4 183.7
H26 C29 H25 H27 120.0 120.0
H26 C29 C13 C14 300.0 186.5
H26 C29 C13 C12 57.4 303.7
H25 C29 H26 H27 240.0 240.0
H27 C29 C13 C14 60.0 306.6
H27 C29 C13 C12 177.4 63.7
H25 C29 H27 H26 120.0 120.0
C11 C12 H28 H29 119.1 238.9
H28 C12 C13 C14 296.9 187.5
C13 C12 H28 H29 240.9 120.9
C11 C12 H29 H28 240.9 121.0
H29 C12 C13 C14 177.5 308.4
C13 C12 H29 H28 119.1 239.2
C10 C11 H30 H31 116.6 241.2
H30 C11 C10 H32 45.5 48.3
H30 C11 C10 H33 284.9 167.6
H30 C11 C12 H28 308.0 302.1
H30 C11 C12 H29 67.5 181.1
C10 C11 H31 H30 243.4 118.8
H31 C11 C10 H32 163.3 289.5
H31 C11 C10 H33 42.7 48.9
H31 C11 C12 H28 190.2 60.9
H31 C11 C12 H29 309.6 299.9
C9 C10 H32 H33 120.9 240.6
H32 C10 C11 H30 45.5 48.3
H32 C10 C11 H31 163.3 289.5
C11 C10 H32 H33 239.1 119.4
C9 C10 H33 H32 239.2 119.4
H33 C10 C11 H30 284.9 167.6
H33 C10 C11 H31 42.7 48.9
C11 C10 H33 H32 120.9 240.6
C15 C16 H34 H35 120.5 238.4
H34 C16 C17 H24 140.5 4.2
C15 C16 H35 H34 239.5 121.5
H35 C16 C17 H24 20.2 125.7
C14 C15 H36 H37 123.9 236.6
H36 C15 C14 H38 197.8 317.0
H36 C15 C16 H34 12.4 23.3
H36 C15 C16 H35 132.7 261.7
C14 C15 H37 H36 236.1 123.4
H37 C15 C14 H38 320.6 193.6
H37 C15 C16 H34 249.6 146.6
H37 C15 C16 H35 9.9 25.1
C13 C14 H38 C15 114.3 111.5
H38 C14 C15 H36 197.8 317.0
H38 C14 C15 H37 320.6 193.6
H40 C7 C8 H39 211.1 184.9
C1 C6 H41 H42 118.4 239.4
C1 C6 H42 H41 241.6 120.5
H43 C1 C6 H41 199.0 49.5
H43 C1 C6 H42 317.9 288.9
H44 O1 C1 H43 60.9 300.3
C3 C4 H45 H46 118.9 239.5
C3 C4 H46 H45 241.0 120.4
H47 C3 C4 H45 290.3 310.7
H47 C3 C4 H46 49.6 190.3
H47 C3 O2 H48 61.3 300.4
H48 O2 C3 H47 61.3 300.4