PDB Chemical Component 8BA

Ideal Model

Chemical Description

Name 8-bromo-deoxyadenosine-5'-monophosphate
Formula C10 H12 Br N5 O6 P
Formal charge 0
Molecular weight 409.110 g/mol
Component type DNA linking
Nonstandard Parent Id DA

Chemical features

Atom count 35
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms O1
Bond count 37
Aromatic bond count 10

Chemical Identifiers

Systematic name (OpenEye OEToolkits) (2~{R},3~{S},5~{R})-5-(6-azanyl-8-bromanyl-purin-9-yl)-2-[[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxymethyl]oxolan-3-ol

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n([C@H]3C[C@H](O)[C@@H](CO[P](O)(=O)=O)O3)c(Br)nc12
SMILES (CACTVS) Nc1ncnc2n([CH]3C[CH](O)[CH](CO[P](O)(=O)=O)O3)c(Br)nc12
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(c(n2)Br)[C@H]3C[C@@H]([C@H](O3)COP(=O)(=O)O)O)N
InChI descriptor InChI=1S/C10H12BrN5O6P/c11-10-15-7-8(12)13-3-14-9(7)16(10)6-1-4(17)5(22-6)2-21-23(18,19)20/h3-6,17H,1-2H2,(H2,12,13,14)(H,18,19,20)/t4-,5+,6+/m0/s1
InChIKey descriptor MQSWICGOHWVNLL-KVQBGUIXSA-N

Status Information

Last modified 2018-09-25
Created 2013-07-16
Release status REL
Model PDB code 4I29
Processing site RCSB