PDB Chemical Component 8AP
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 8AP
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N1 |
C2 |
1.395 |
1.418 |
N1 |
HN11 |
1.000 |
0.996 |
N1 |
HN12 |
1.000 |
0.997 |
C2 |
N3 |
1.329 |
1.352 |
C2 |
C7 |
1.402 |
1.396 |
N3 |
C4 |
1.328 |
1.352 |
C4 |
C5 |
1.386 |
1.386 |
C4 |
H4 |
1.080 |
1.085 |
C5 |
C6 |
1.389 |
1.390 |
C5 |
H5 |
1.080 |
1.085 |
C6 |
C7 |
1.397 |
1.401 |
C6 |
H6 |
1.080 |
1.086 |
C7 |
N8 |
1.401 |
1.387 |
N8 |
C9 |
1.472 |
1.441 |
N8 |
HN8 |
1.000 |
1.015 |
C9 |
C10 |
1.520 |
1.491 |
C9 |
H91 |
1.100 |
1.099 |
C9 |
H92 |
1.100 |
1.099 |
C10 |
C11 |
1.398 |
1.394 |
C10 |
C15 |
1.386 |
1.395 |
C11 |
C12 |
1.387 |
1.395 |
C11 |
H11 |
1.080 |
1.087 |
C12 |
C13 |
1.387 |
1.395 |
C12 |
H12 |
1.080 |
1.086 |
C13 |
C14 |
1.390 |
1.396 |
C13 |
H13 |
1.080 |
1.087 |
C14 |
C15 |
1.389 |
1.395 |
C14 |
H14 |
1.080 |
1.086 |
C15 |
H15 |
1.080 |
1.087 |
Bond Angles for 8AP
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
N1 |
HN11 |
109.5 |
118.9 |
C2 |
N1 |
HN12 |
109.5 |
118.8 |
N1 |
C2 |
N3 |
119.1 |
117.6 |
N1 |
C2 |
C7 |
121.5 |
117.6 |
HN11 |
N1 |
HN12 |
109.5 |
122.1 |
N3 |
C2 |
C7 |
119.4 |
124.8 |
C2 |
N3 |
C4 |
123.0 |
116.4 |
C2 |
C7 |
C6 |
118.9 |
116.5 |
C2 |
C7 |
N8 |
121.2 |
123.0 |
N3 |
C4 |
C5 |
120.4 |
124.0 |
N3 |
C4 |
H4 |
119.8 |
115.2 |
C5 |
C4 |
H4 |
119.8 |
120.8 |
C4 |
C5 |
C6 |
118.9 |
118.0 |
C4 |
C5 |
H5 |
120.5 |
121.0 |
C6 |
C5 |
H5 |
120.5 |
121.0 |
C5 |
C6 |
C7 |
119.3 |
120.4 |
C5 |
C6 |
H6 |
120.3 |
119.6 |
C7 |
C6 |
H6 |
120.3 |
120.0 |
C6 |
C7 |
N8 |
119.8 |
120.5 |
C7 |
N8 |
C9 |
119.2 |
123.8 |
C7 |
N8 |
HN8 |
106.4 |
118.0 |
C9 |
N8 |
HN8 |
106.3 |
118.2 |
N8 |
C9 |
C10 |
111.7 |
112.4 |
N8 |
C9 |
H91 |
108.7 |
107.4 |
N8 |
C9 |
H92 |
108.2 |
107.3 |
C10 |
C9 |
H91 |
108.7 |
111.1 |
C10 |
C9 |
H92 |
108.2 |
111.6 |
C9 |
C10 |
C11 |
121.7 |
120.0 |
C9 |
C10 |
C15 |
119.0 |
120.0 |
H91 |
C9 |
H92 |
111.2 |
106.8 |
C11 |
C10 |
C15 |
119.4 |
120.0 |
C10 |
C11 |
C12 |
120.9 |
120.0 |
C10 |
C11 |
H11 |
119.6 |
120.5 |
C10 |
C15 |
C14 |
119.8 |
120.0 |
C10 |
C15 |
H15 |
120.1 |
120.5 |
C12 |
C11 |
H11 |
119.5 |
119.5 |
C11 |
C12 |
C13 |
119.4 |
120.0 |
C11 |
C12 |
H12 |
120.3 |
120.0 |
C13 |
C12 |
H12 |
120.3 |
120.0 |
C12 |
C13 |
C14 |
119.9 |
120.0 |
C12 |
C13 |
H13 |
120.0 |
120.0 |
C14 |
C13 |
H13 |
120.1 |
119.9 |
C13 |
C14 |
C15 |
120.6 |
119.9 |
C13 |
C14 |
H14 |
119.7 |
120.0 |
C15 |
C14 |
H14 |
119.7 |
120.1 |
C14 |
C15 |
H15 |
120.1 |
119.4 |
Torsion Angles for 8AP
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
HN11 |
N1 |
C2 |
HN12 |
240.0 |
173.8 |
N3 |
C2 |
N1 |
C7 |
179.6 |
180.0 |
N1 |
C2 |
N3 |
C4 |
179.7 |
180.0 |
N1 |
C2 |
C7 |
C6 |
181.1 |
180.0 |
N1 |
C2 |
C7 |
N8 |
358.9 |
0.1 |
C2 |
N1 |
HN11 |
HN12 |
120.0 |
186.5 |
HN11 |
N1 |
C2 |
N3 |
151.1 |
57.1 |
HN11 |
N1 |
C2 |
C7 |
331.6 |
237.1 |
C2 |
N1 |
HN12 |
HN11 |
240.0 |
173.6 |
HN12 |
N1 |
C2 |
N3 |
271.1 |
243.3 |
HN12 |
N1 |
C2 |
C7 |
91.6 |
63.3 |
N3 |
C2 |
N1 |
HN11 |
151.1 |
57.1 |
N3 |
C2 |
N1 |
HN12 |
271.1 |
243.3 |
N1 |
C2 |
N3 |
C7 |
180.4 |
180.0 |
N3 |
C2 |
C7 |
C6 |
1.5 |
359.9 |
N3 |
C2 |
C7 |
N8 |
179.3 |
180.1 |
C2 |
N3 |
C4 |
C5 |
359.8 |
360.0 |
C2 |
N3 |
C4 |
H4 |
179.8 |
180.0 |
C7 |
C2 |
N1 |
HN11 |
331.6 |
237.1 |
C7 |
C2 |
N1 |
HN12 |
91.6 |
63.3 |
N1 |
C2 |
C7 |
N3 |
179.6 |
180.0 |
C7 |
C2 |
N3 |
C4 |
359.3 |
0.0 |
C5 |
C6 |
C7 |
C2 |
358.5 |
0.1 |
C2 |
C7 |
C6 |
H6 |
178.5 |
180.0 |
C6 |
C7 |
C2 |
N8 |
182.2 |
179.9 |
C2 |
C7 |
N8 |
C9 |
200.3 |
179.9 |
C2 |
C7 |
N8 |
HN8 |
320.3 |
0.0 |
C4 |
N3 |
C2 |
C7 |
359.3 |
0.0 |
C5 |
C4 |
N3 |
H4 |
180.0 |
180.0 |
N3 |
C4 |
C5 |
C6 |
0.3 |
0.0 |
N3 |
C4 |
C5 |
H5 |
180.3 |
180.0 |
N3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.1 |
C4 |
C5 |
C6 |
C7 |
0.6 |
359.9 |
C4 |
C5 |
C6 |
H6 |
180.6 |
180.0 |
N3 |
C4 |
H4 |
C5 |
180.0 |
180.0 |
H4 |
C4 |
C5 |
C6 |
180.3 |
180.0 |
H4 |
C4 |
C5 |
H5 |
0.3 |
360.0 |
C2 |
C7 |
C6 |
C5 |
358.5 |
0.1 |
C6 |
C5 |
C4 |
H4 |
180.3 |
180.0 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.9 |
C7 |
C6 |
C5 |
H6 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
N8 |
180.7 |
179.9 |
H5 |
C5 |
C4 |
H4 |
0.3 |
360.0 |
C4 |
C5 |
H5 |
C6 |
180.0 |
180.1 |
H5 |
C5 |
C6 |
C7 |
180.6 |
180.0 |
H5 |
C5 |
C6 |
H6 |
0.6 |
0.1 |
C2 |
C7 |
C6 |
N8 |
177.8 |
180.1 |
C7 |
C6 |
C5 |
H5 |
180.6 |
180.0 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C6 |
C7 |
N8 |
C9 |
18.0 |
0.0 |
C6 |
C7 |
N8 |
HN8 |
138.0 |
180.2 |
H6 |
C6 |
C5 |
H5 |
0.6 |
0.1 |
C5 |
C6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
C6 |
C7 |
N8 |
0.7 |
359.9 |
C2 |
C7 |
N8 |
C6 |
182.2 |
179.9 |
N8 |
C7 |
C6 |
H6 |
0.7 |
359.9 |
C9 |
N8 |
C7 |
HN8 |
240.0 |
179.9 |
C7 |
N8 |
C9 |
C10 |
65.6 |
182.5 |
C7 |
N8 |
C9 |
H91 |
185.6 |
60.0 |
C7 |
N8 |
C9 |
H92 |
306.5 |
305.5 |
C7 |
N8 |
C9 |
HN8 |
120.0 |
180.1 |
C10 |
C9 |
N8 |
H91 |
240.0 |
122.5 |
C10 |
C9 |
N8 |
H92 |
119.0 |
237.0 |
N8 |
C9 |
C10 |
C11 |
3.6 |
270.0 |
N8 |
C9 |
C10 |
C15 |
183.4 |
90.0 |
H91 |
C9 |
N8 |
H92 |
239.0 |
114.5 |
C7 |
N8 |
HN8 |
C9 |
232.0 |
179.9 |
HN8 |
N8 |
C9 |
C10 |
305.6 |
2.4 |
HN8 |
N8 |
C9 |
H91 |
65.6 |
239.9 |
HN8 |
N8 |
C9 |
H92 |
186.5 |
125.4 |
C10 |
C9 |
N8 |
HN8 |
305.6 |
2.4 |
N8 |
C9 |
C10 |
H91 |
120.0 |
239.6 |
N8 |
C9 |
C10 |
H92 |
241.0 |
120.6 |
H91 |
C9 |
C10 |
H92 |
121.0 |
241.0 |
C11 |
C10 |
C9 |
C15 |
180.3 |
180.0 |
C9 |
C10 |
C11 |
C12 |
179.8 |
180.0 |
C9 |
C10 |
C11 |
H11 |
359.8 |
360.0 |
C9 |
C10 |
C15 |
C14 |
180.5 |
180.0 |
C9 |
C10 |
C15 |
H15 |
0.5 |
360.0 |
H91 |
C9 |
N8 |
HN8 |
65.6 |
239.9 |
N8 |
C9 |
H91 |
C10 |
238.2 |
123.3 |
N8 |
C9 |
H91 |
H92 |
119.1 |
245.1 |
C10 |
C9 |
H91 |
H92 |
240.9 |
121.9 |
H91 |
C9 |
C10 |
C11 |
243.7 |
30.4 |
H91 |
C9 |
C10 |
C15 |
63.4 |
210.4 |
H92 |
C9 |
N8 |
HN8 |
186.5 |
125.4 |
N8 |
C9 |
H92 |
C10 |
121.2 |
236.5 |
N8 |
C9 |
H92 |
H91 |
240.6 |
114.9 |
C10 |
C9 |
H92 |
H91 |
119.4 |
238.4 |
H92 |
C9 |
C10 |
C11 |
122.7 |
149.5 |
H92 |
C9 |
C10 |
C15 |
302.4 |
329.4 |
C11 |
C10 |
C9 |
H91 |
243.7 |
30.4 |
C11 |
C10 |
C9 |
H92 |
122.7 |
149.5 |
C9 |
C10 |
C11 |
C15 |
179.7 |
180.0 |
C11 |
C10 |
C15 |
C14 |
0.2 |
360.0 |
C11 |
C10 |
C15 |
H15 |
180.2 |
180.0 |
C12 |
C11 |
C10 |
H11 |
180.0 |
180.1 |
C10 |
C11 |
C12 |
C13 |
359.8 |
360.0 |
C10 |
C11 |
C12 |
H12 |
179.8 |
180.0 |
C15 |
C10 |
C9 |
H91 |
63.4 |
210.4 |
C15 |
C10 |
C9 |
H92 |
302.4 |
329.4 |
C9 |
C10 |
C15 |
C11 |
180.2 |
180.0 |
C15 |
C10 |
C11 |
C12 |
0.0 |
0.0 |
C15 |
C10 |
C11 |
H11 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
C10 |
359.7 |
0.0 |
C10 |
C15 |
C14 |
H14 |
179.7 |
180.0 |
C14 |
C15 |
C10 |
H15 |
180.0 |
180.0 |
C12 |
C11 |
C10 |
C15 |
0.0 |
0.0 |
C10 |
C11 |
C12 |
H11 |
180.0 |
179.9 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C11 |
C12 |
C13 |
C14 |
0.1 |
0.0 |
C11 |
C12 |
C13 |
H13 |
180.1 |
180.0 |
H11 |
C11 |
C10 |
C15 |
180.0 |
180.0 |
C10 |
C11 |
H11 |
C12 |
180.0 |
180.1 |
H11 |
C11 |
C12 |
C13 |
179.8 |
180.0 |
H11 |
C11 |
C12 |
H12 |
359.8 |
0.0 |
C13 |
C12 |
C11 |
H11 |
179.8 |
180.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
180.0 |
C14 |
C13 |
C12 |
H13 |
180.0 |
180.0 |
C12 |
C13 |
C14 |
C15 |
0.1 |
360.0 |
C12 |
C13 |
C14 |
H14 |
180.1 |
180.0 |
H12 |
C12 |
C11 |
H11 |
359.8 |
0.0 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.0 |
H12 |
C12 |
C13 |
C14 |
180.1 |
180.0 |
H12 |
C12 |
C13 |
H13 |
0.1 |
360.0 |
C10 |
C15 |
C14 |
C13 |
359.7 |
0.0 |
C14 |
C13 |
C12 |
H12 |
180.1 |
180.0 |
C12 |
C13 |
C14 |
H13 |
180.0 |
180.0 |
C15 |
C14 |
C13 |
H14 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
H15 |
179.7 |
180.0 |
H13 |
C13 |
C12 |
H12 |
0.1 |
360.0 |
C12 |
C13 |
H13 |
C14 |
180.0 |
180.0 |
H13 |
C13 |
C14 |
C15 |
180.1 |
180.0 |
H13 |
C13 |
C14 |
H14 |
0.1 |
0.0 |
C10 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
C15 |
C14 |
C13 |
H13 |
180.1 |
180.0 |
C13 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
H14 |
C14 |
C13 |
H13 |
0.1 |
0.0 |
C13 |
C14 |
H14 |
C15 |
180.0 |
180.0 |
H14 |
C14 |
C15 |
H15 |
359.7 |
360.0 |
C10 |
C15 |
H15 |
C14 |
180.0 |
180.0 |
H15 |
C15 |
C14 |
H14 |
359.7 |
360.0 |