PDB Chemical Component 898

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 898

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CL1 C1 1.744 1.736
C1 C2 1.359 1.338
C1 S2 1.701 1.759
C2 C3 1.429 1.379
C3 C4 1.434 1.351
S2 C4 1.709 1.759
C4 C5 1.453 1.471
C5 C6 1.342 1.331
C6 S1 1.735 1.762
S1 O2 1.425 1.420
S1 O1 1.445 1.421
S1 N1 1.624 1.656
N1 C12 1.452 1.465
C12 C13 1.525 1.547
C12 C50 1.520 1.513
C13 C14 1.538 1.544
C14 N2 1.463 1.468
C50 O3 1.219 1.213
C50 N2 1.344 1.344
N2 C15 1.423 1.400
C15 C21 1.402 1.391
C15 C22 1.408 1.388
C21 F1 1.331 1.351
C21 C24 1.382 1.384
C22 C26 1.403 1.382
C26 C27 1.414 1.381
C27 C24 1.403 1.383
C27 C28 1.497 1.507
C28 C8 1.538 1.530
C28 N3 1.505 1.469
N3 C9 1.476 1.468
N3 C7 1.488 1.469
C2 H2 1.080 1.080
C3 H3 1.079 1.081
C5 H51C 1.080 1.080
C6 H61C 1.080 1.079
N1 H1 1.000 0.969
C12 H12 1.100 1.090
C13 H131 1.100 1.090
C13 H132 1.100 1.089
C14 H141 1.100 1.090
C14 H142 1.100 1.089
C22 H22 1.080 1.081
C24 H24 1.080 1.080
C26 H26 1.080 1.080
C28 H28 1.100 1.091
C8 H81C 1.100 1.091
C8 H82C 1.100 1.090
C8 H83C 1.100 1.090
C9 H91C 1.100 1.090
C9 H92C 1.100 1.090
C9 H93C 1.100 1.089
C7 H71C 1.100 1.091
C7 H72C 1.100 1.089
C7 H73C 1.100 1.091

Bond Angles for 898

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CL1 C1 C2 127.7 125.1
CL1 C1 S2 118.8 125.1
C2 C1 S2 113.5 109.8
C1 C2 C3 112.3 115.0
C1 C2 H2 123.9 122.5
C1 S2 C4 92.4 91.0
C2 C3 C4 111.1 114.7
C3 C2 H2 123.8 122.5
C2 C3 H3 124.5 122.6
C3 C4 S2 110.7 109.4
C3 C4 C5 125.2 125.3
C4 C3 H3 124.5 122.7
S2 C4 C5 124.1 125.3
C4 C5 C6 126.7 120.0
C4 C5 H51C 116.6 120.0
C5 C6 S1 118.1 120.0
C6 C5 H51C 116.7 120.0
C5 C6 H61C 120.9 120.0
C6 S1 O2 107.6 106.4
C6 S1 O1 105.5 106.4
C6 S1 N1 112.3 107.2
S1 C6 H61C 120.9 120.0
O2 S1 O1 120.2 123.2
O2 S1 N1 101.5 106.4
O1 S1 N1 109.8 106.4
S1 N1 C12 125.0 120.0
S1 N1 H1 104.6 120.0
N1 C12 C13 113.0 110.5
N1 C12 C50 112.2 110.5
C12 N1 H1 104.6 120.0
N1 C12 H12 103.4 110.5
C13 C12 C50 103.0 104.2
C12 C13 C14 104.3 101.7
C13 C12 H12 112.4 110.4
C12 C13 H131 111.2 110.9
C12 C13 H132 112.3 111.0
C12 C50 O3 127.6 124.9
C12 C50 N2 108.6 110.1
C50 C12 H12 113.2 110.6
C13 C14 N2 103.6 105.5
C14 C13 H131 111.2 111.0
C14 C13 H132 112.3 111.0
C13 C14 H141 111.5 110.2
C13 C14 H142 112.7 110.3
C14 N2 C50 113.4 111.3
C14 N2 C15 123.2 124.4
N2 C14 H141 111.5 110.2
N2 C14 H142 112.7 110.2
O3 C50 N2 123.9 125.0
C50 N2 C15 123.3 124.3
N2 C15 C21 121.6 120.0
N2 C15 C22 117.9 120.1
C21 C15 C22 120.5 119.8
C15 C21 F1 120.3 120.1
C15 C21 C24 122.1 119.9
C15 C22 C26 117.8 120.0
C15 C22 H22 121.1 119.9
F1 C21 C24 117.6 120.0
C21 C24 C27 118.0 120.0
C21 C24 H24 121.0 119.9
C22 C26 C27 120.8 120.1
C26 C22 H22 121.1 120.1
C22 C26 H26 119.6 119.9
C26 C27 C24 120.8 120.2
C26 C27 C28 120.7 119.9
C27 C26 H26 119.6 120.0
C24 C27 C28 118.5 119.9
C27 C24 H24 121.0 120.0
C27 C28 C8 111.0 109.5
C27 C28 N3 111.7 109.5
C27 C28 H28 107.7 109.5
C8 C28 N3 111.7 109.5
C8 C28 H28 107.6 109.4
C28 C8 H81C 109.5 109.5
C28 C8 H82C 109.5 109.5
C28 C8 H83C 109.5 109.5
C28 N3 C9 113.5 111.0
C28 N3 C7 117.3 111.0
N3 C28 H28 106.9 109.5
C9 N3 C7 110.0 111.0
N3 C9 H91C 109.5 109.5
N3 C9 H92C 109.4 109.5
N3 C9 H93C 109.5 109.5
N3 C7 H71C 109.5 109.5
N3 C7 H72C 109.5 109.5
N3 C7 H73C 109.5 109.5
H131 C13 H132 105.5 110.9
H141 C14 H142 105.1 110.3
H81C C8 H82C 109.4 109.5
H81C C8 H83C 109.4 109.4
H82C C8 H83C 109.5 109.5
H91C C9 H92C 109.5 109.4
H91C C9 H93C 109.4 109.5
H92C C9 H93C 109.5 109.5
H71C C7 H72C 109.5 109.5
H71C C7 H73C 109.5 109.5
H72C C7 H73C 109.5 109.5

Torsion Angles for 898

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C1 CL1 S2 179.9 180.3
CL1 C1 C2 C3 180.3 180.0
CL1 C1 C2 H2 0.3 360.0
CL1 C1 S2 C4 179.7 179.9
CL1 C1 C2 S2 180.1 179.7
C2 C1 S2 C4 359.8 359.7
C1 C2 C3 C4 359.9 360.0
C3 C2 C1 H2 180.0 180.0
C1 C2 C3 H3 179.9 180.0
CL1 C1 S2 C2 179.9 180.3
S2 C1 C2 C3 0.2 0.3
S2 C1 C2 H2 180.2 180.2
C3 C4 S2 C1 0.2 0.3
C1 S2 C4 C5 179.3 180.1
C3 C2 C1 S2 0.2 0.3
C1 C2 C3 H2 180.0 180.0
C2 C3 C4 S2 359.9 359.7
C2 C3 C4 C5 180.8 180.0
C4 C3 C2 H3 180.0 180.0
C1 S2 C4 C3 0.2 0.3
C4 C3 C2 H2 179.9 180.0
C2 C3 C4 H3 180.0 180.0
S2 C4 C3 C5 179.1 179.7
C3 C4 C5 C6 190.6 180.0
C3 C4 C5 H51C 10.6 360.0
C3 C4 S2 C5 180.9 180.3
S2 C4 C3 H3 179.9 179.7
S2 C4 C5 C6 11.6 0.3
S2 C4 C5 H51C 191.6 180.3
C3 C4 C5 S2 179.0 179.7
C5 C4 C3 H3 0.9 360.0
C4 C5 C6 S1 181.2 180.0
C6 C5 C4 H51C 180.0 180.1
C4 C5 C6 H61C 1.2 359.9
C4 C5 C6 H51C 180.0 179.9
C5 C6 S1 O2 136.7 228.5
C5 C6 S1 O1 7.2 1.4
C5 C6 S1 N1 247.6 115.0
S1 C6 C5 H61C 180.0 180.1
S1 C6 C5 H51C 1.2 0.0
C5 C6 S1 H61C 180.0 179.9
O2 S1 C6 O1 129.5 227.1
O2 S1 C6 N1 249.1 113.5
O1 S1 C6 N1 119.6 246.5
C6 S1 N1 C12 47.2 65.0
C6 S1 N1 H1 167.2 245.0
C6 S1 O2 O1 239.4 123.0
C6 S1 O2 N1 118.1 245.9
O2 S1 C6 H61C 316.8 48.6
O1 S1 O2 N1 238.7 122.9
O2 S1 N1 C12 161.9 311.4
O2 S1 N1 H1 281.9 131.5
C6 S1 O1 O2 121.7 237.0
C6 S1 O1 N1 238.8 114.1
O1 S1 C6 H61C 187.2 181.5
O2 S1 O1 N1 117.1 237.1
O1 S1 N1 C12 290.2 178.5
O1 S1 N1 H1 50.1 358.6
C6 S1 N1 O2 245.3 113.5
C6 S1 N1 O1 117.0 246.5
N1 S1 C6 H61C 67.6 295.0
O2 S1 N1 O1 231.7 132.9
S1 N1 C12 C13 138.2 145.0
S1 N1 C12 C50 254.1 259.8
C12 N1 S1 H1 240.0 179.9
S1 N1 C12 H12 16.4 22.5
S1 N1 C12 H1 120.0 180.1
C13 C12 N1 C50 244.1 245.2
N1 C12 C13 C14 147.5 93.9
C13 C12 N1 H12 121.8 122.5
N1 C12 C13 H131 267.5 212.0
N1 C12 C13 H132 25.6 335.8
N1 C12 C50 O3 36.8 77.5
N1 C12 C50 N2 216.5 257.6
C50 C12 N1 H12 237.7 237.3
N1 C12 C13 C50 121.3 118.7
C13 C12 N1 H1 18.2 324.9
N1 C12 C13 H12 243.5 237.5
C13 C12 C50 O3 158.6 196.2
C13 C12 C50 N2 338.3 16.3
C50 C12 C13 H12 122.2 118.8
C12 C13 C14 N2 337.9 25.5
C14 C13 C12 H131 240.0 241.9
C14 C13 C12 H132 121.9 118.1
C12 C13 C14 H141 98.0 144.4
C12 C13 C14 H142 215.8 266.4
H131 C13 C12 H132 241.9 236.2
N1 C12 C50 C13 238.2 241.3
C50 C12 N1 H1 134.1 79.7
N1 C12 C50 H12 116.5 122.6
C50 C12 C13 C14 26.2 335.2
C13 C12 C50 H12 238.3 241.3
C50 C12 C13 H131 146.2 93.3
C50 C12 C13 H132 264.3 217.1
C14 N2 C50 C12 7.9 0.4
O3 C50 C12 N2 180.3 180.0
C12 C50 N2 C15 189.1 180.4
C14 C13 C12 C50 26.2 335.2
C14 C13 C12 H12 264.0 216.4
C12 C13 C14 H131 120.0 118.1
C12 C13 C14 H132 238.1 241.9
C13 C14 N2 C50 9.2 342.9
C13 C14 N2 C15 188.1 163.0
N2 C14 C13 H141 240.0 241.1
N2 C14 C13 H142 122.1 119.0
H131 C13 C14 H132 118.1 123.8
H141 C14 C13 H142 242.1 238.0
C12 C50 N2 C14 7.9 0.4
N2 C14 C13 H131 217.9 267.4
N2 C14 C13 H132 99.9 143.6
C13 C14 N2 H141 120.0 119.0
C13 C14 N2 H142 237.8 240.9
O3 C50 N2 C14 187.7 180.4
C50 N2 C14 C15 181.1 179.9
C14 N2 C15 C21 132.1 270.0
C14 N2 C15 C22 312.4 89.7
H141 C14 N2 H142 117.8 122.0
C12 C50 O3 N2 179.7 180.0
O3 C50 C12 H12 280.3 314.9
C14 N2 C50 O3 187.7 180.4
O3 C50 N2 C15 8.8 0.4
C12 C50 N2 O3 180.3 180.0
N2 C50 C12 H12 100.0 134.9
C14 N2 C50 C15 178.9 180.1
C50 N2 C14 H141 249.2 224.0
C50 N2 C14 H142 131.3 102.0
C50 N2 C15 C21 310.9 90.1
C50 N2 C15 C22 131.2 269.8
C14 N2 C15 C50 181.2 179.9
C15 N2 C14 H141 68.1 44.1
C15 N2 C14 H142 310.2 282.1
C21 C15 N2 C22 179.7 180.3
N2 C15 C21 F1 0.4 360.0
N2 C15 C21 C24 180.6 180.0
N2 C15 C22 C26 179.9 180.0
N2 C15 C22 H22 359.9 360.0
N2 C15 C21 C22 180.3 179.7
C21 C15 C22 C26 0.2 359.7
C21 C15 C22 H22 180.2 179.7
F1 C21 C15 C24 179.8 180.0
C15 C21 C24 C27 359.7 360.0
C15 C21 C24 H24 179.8 180.0
N2 C15 C22 C21 179.7 180.3
C22 C15 C21 F1 180.1 180.3
C22 C15 C21 C24 0.3 0.3
C15 C22 C26 C27 359.3 0.0
C26 C22 C15 H22 180.0 180.0
C15 C22 C26 H26 179.3 180.0
F1 C21 C15 C22 180.1 180.3
C15 C21 F1 C24 180.2 180.0
F1 C21 C24 C27 179.9 180.0
F1 C21 C24 H24 359.9 360.0
C24 C21 C15 C22 0.3 0.3
C15 C21 C24 F1 179.8 180.0
C26 C27 C24 C21 359.8 359.8
C21 C24 C27 C28 179.7 180.0
C27 C24 C21 H24 180.0 180.0
C15 C22 C26 H22 180.0 180.0
C22 C26 C27 C24 0.7 0.2
C22 C26 C27 C28 180.8 180.0
C27 C26 C22 H26 180.0 180.0
C21 C24 C27 C26 359.8 359.8
C27 C26 C22 H22 179.3 180.1
C22 C26 C27 H26 180.0 180.0
C24 C27 C26 C28 179.9 180.2
C26 C27 C24 H24 179.7 179.8
C26 C27 C28 C8 232.3 254.6
C26 C27 C28 N3 106.9 134.5
C26 C27 C28 H28 349.8 14.5
C21 C24 C27 H24 180.0 180.0
C26 C27 C24 C28 180.1 179.8
C24 C27 C26 H26 180.7 180.2
C24 C27 C28 C8 52.3 74.3
C24 C27 C28 N3 286.9 314.3
C24 C27 C28 H28 169.9 194.3
C26 C27 C28 C24 179.9 180.2
C28 C27 C26 H26 0.8 0.0
C28 C27 C24 H24 359.7 360.0
C8 C28 C27 N3 125.4 120.0
C8 C28 C27 H28 242.4 240.0
C27 C28 C8 H81C 238.1 300.0
C27 C28 C8 H82C 358.1 60.0
C27 C28 C8 H83C 118.1 180.0
C27 C28 N3 C9 301.0 176.3
C27 C28 N3 C7 70.9 300.2
N3 C28 C27 H28 117.0 120.0
C27 C28 C8 N3 234.7 239.9
C27 C28 C8 H28 117.6 120.0
C8 C28 N3 C9 176.0 56.2
C8 C28 N3 C7 305.9 180.2
N3 C28 C8 H28 243.0 240.0
H81C C8 C28 H82C 240.0 240.0
H81C C8 C28 H83C 120.0 120.0
H82C C8 C28 H83C 240.0 240.0
C27 C28 N3 C8 125.0 120.0
C27 C28 N3 H28 242.5 240.0
C8 C28 N3 H28 117.5 119.9
N3 C28 C8 H81C 3.5 60.0
N3 C28 C8 H82C 123.5 180.0
N3 C28 C8 H83C 243.5 300.1
C9 N3 C28 C7 230.1 236.0
C28 N3 C9 H91C 358.6 53.7
C28 N3 C9 H92C 118.6 173.7
C28 N3 C9 H93C 238.6 293.7
C28 N3 C7 H71C 326.2 60.0
C28 N3 C7 H72C 86.2 180.0
C28 N3 C7 H73C 206.2 300.0
C28 N3 C9 C7 133.5 124.0
C9 N3 C28 H28 58.5 296.3
C9 N3 C7 H71C 97.8 184.0
C9 N3 C7 H72C 217.8 304.0
C9 N3 C7 H73C 337.7 64.0
H91C C9 N3 H92C 240.0 240.1
H91C C9 N3 H93C 120.0 120.0
H92C C9 N3 H93C 240.0 240.0
C28 N3 C7 C9 228.4 236.0
C7 N3 C28 H28 188.4 60.3
C7 N3 C9 H91C 225.1 289.8
C7 N3 C9 H92C 345.1 49.7
C7 N3 C9 H93C 105.1 169.7
H71C C7 N3 H72C 240.0 240.0
H71C C7 N3 H73C 120.0 120.0
H72C C7 N3 H73C 240.0 240.0
H2 C2 C1 S2 180.2 180.2
C1 C2 H2 C3 180.0 180.0
H2 C2 C3 C4 179.9 180.0
H2 C2 C3 H3 359.9 0.1
C2 C3 H3 C4 180.0 180.0
H3 C3 C2 H2 359.9 0.1
H3 C3 C4 S2 179.9 179.7
H3 C3 C4 C5 0.9 360.0
C4 C5 H51C C6 180.0 180.1
H51C C5 C6 S1 1.2 0.0
H51C C5 C6 H61C 181.2 180.0
C5 C6 H61C S1 180.0 180.1
H61C C6 C5 H51C 181.2 180.0
H61C C6 S1 O2 316.8 48.6
H61C C6 S1 O1 187.2 181.5
H61C C6 S1 N1 67.6 295.0
S1 N1 H1 C12 227.2 179.9
H1 N1 C12 C13 18.2 324.9
H1 N1 C12 C50 134.1 79.7
H1 N1 C12 H12 256.4 202.4
N1 C12 H12 C13 122.1 122.5
N1 C12 H12 C50 238.4 237.3
H12 C12 N1 H1 256.4 202.4
C13 C12 H12 C50 116.3 114.8
H12 C12 C13 C14 264.0 216.4
H12 C12 C13 H131 24.0 334.5
H12 C12 C13 H132 142.1 98.3
H12 C12 C50 O3 280.3 314.9
H12 C12 C50 N2 100.0 134.9
H131 C13 C12 C50 146.2 93.3
C12 C13 H131 C14 244.2 247.7
H131 C13 C12 H12 24.0 334.5
C12 C13 H131 H132 122.1 123.8
H131 C13 C14 N2 217.9 267.4
C14 C13 H131 H132 237.9 236.1
H131 C13 C14 H141 338.0 26.3
H131 C13 C14 H142 95.8 148.3
H132 C13 C12 C50 264.3 217.1
C12 C13 H132 C14 117.2 112.4
H132 C13 C12 H12 142.1 98.3
C12 C13 H132 H131 238.6 236.2
H132 C13 C14 N2 99.9 143.6
C14 C13 H132 H131 121.4 123.9
H132 C13 C14 H141 219.9 262.5
H132 C13 C14 H142 337.8 24.5
C13 C14 H141 N2 244.7 244.0
H141 C14 C13 H131 338.0 26.3
H141 C14 C13 H132 219.9 262.5
C13 C14 H141 H142 122.4 122.0
H141 C14 N2 C50 249.2 224.0
H141 C14 N2 C15 68.1 44.1
N2 C14 H141 H142 237.7 238.0
C13 C14 H142 N2 116.9 116.1
H142 C14 C13 H131 95.8 148.3
H142 C14 C13 H132 337.8 24.5
C13 C14 H142 H141 238.4 238.0
H142 C14 N2 C50 131.3 102.0
H142 C14 N2 C15 310.2 282.1
N2 C14 H142 H141 121.6 121.9
C15 C22 H22 C26 180.0 180.0
H22 C22 C26 C27 179.3 180.1
H22 C22 C26 H26 359.3 0.0
C21 C24 H24 C27 180.0 180.0
H24 C24 C27 C28 359.7 360.0
C22 C26 H26 C27 180.0 180.0
H26 C26 C22 H22 359.3 0.0
H26 C26 C27 C24 180.7 180.2
H26 C26 C27 C28 0.8 0.0
C27 C28 H28 C8 240.3 240.0
C27 C28 H28 N3 120.1 120.0
C8 C28 H28 N3 239.8 240.0
H28 C28 C8 H81C 120.5 180.0
H28 C28 C8 H82C 240.5 300.0
H28 C28 C8 H83C 0.5 60.0
H28 C28 N3 C9 58.5 296.3
H28 C28 N3 C7 188.4 60.3
H81C C8 C28 N3 3.5 60.0
H81C C8 C28 H28 120.5 180.0
C28 C8 H81C H82C 120.0 120.0
C28 C8 H81C H83C 240.0 240.0
H82C C8 H81C H83C 120.0 120.0
H82C C8 C28 N3 123.5 180.0
H82C C8 C28 H28 240.5 300.0
C28 C8 H82C H81C 240.0 240.0
C28 C8 H82C H83C 120.0 120.1
H81C C8 H82C H83C 240.0 240.1
H83C C8 C28 N3 243.5 300.1
H83C C8 C28 H28 0.5 60.0
C28 C8 H83C H81C 120.0 120.0
C28 C8 H83C H82C 240.0 240.0
H81C C8 H83C H82C 120.0 120.0
H91C C9 N3 C7 225.1 289.8
N3 C9 H91C H92C 120.0 120.0
N3 C9 H91C H93C 240.0 240.0
H92C C9 H91C H93C 120.0 120.0
H92C C9 N3 C7 345.1 49.7
N3 C9 H92C H91C 240.0 240.0
N3 C9 H92C H93C 120.0 120.0
H91C C9 H92C H93C 240.0 240.0
H93C C9 N3 C7 105.1 169.7
N3 C9 H93C H91C 120.0 120.0
N3 C9 H93C H92C 240.0 240.0
H91C C9 H93C H92C 120.0 119.9
N3 C7 H71C H72C 120.0 120.0
N3 C7 H71C H73C 240.0 240.0
H72C C7 H71C H73C 120.0 120.0
N3 C7 H72C H71C 240.0 240.0
N3 C7 H72C H73C 120.0 120.0
H71C C7 H72C H73C 240.0 240.0
N3 C7 H73C H71C 120.0 120.0
N3 C7 H73C H72C 240.0 240.0
H71C C7 H73C H72C 120.0 120.0