PDB Chemical Component 88Q

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 88Q

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O5	C11	1.410	1.429
C11	C10	1.513	1.530
C10	C9	1.513	1.531
C10	O4	1.424	1.430
C10	C12	1.407	1.531
C9	C8	1.494	1.531
C8	C7	1.522	1.531
C12	O6	1.373	1.429
O6	C7	1.464	1.429
C7	C5	1.446	1.530
C5	O3	1.364	1.429
C5	C4	1.532	1.531
O3	C6	1.379	1.430
C6	C2	1.507	1.531
C4	C3	1.493	1.532
C3	C2	1.506	1.532
C2	O2	1.422	1.430
C2	C1	1.504	1.530
C1	O1	1.407	1.429
O5	H5	0.950	0.967
C11	H111	1.100	1.090
C11	H112	1.100	1.090
C9	H91C	1.100	1.091
C9	H92C	1.100	1.090
O4	H4	0.950	0.967
C12	H121	1.100	1.089
C12	H122	1.100	1.090
C8	H81C	1.100	1.090
C8	H82C	1.100	1.090
C7	H7	1.100	1.090
C5	HA	1.100	1.090
C4	H41C	1.100	1.090
C4	H42C	1.100	1.090
C6	H61C	1.100	1.090
C6	H62C	1.100	1.090
C3	H31C	1.101	1.090
C3	H32C	1.100	1.090
O2	H2	0.949	0.968
C1	H11C	1.100	1.089
C1	H12C	1.100	1.090
O1	H1	0.950	0.967

Bond Angles for 88Q

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O5	C11	C10	109.3	109.5
C11	O5	H5	109.5	114.0
O5	C11	H111	109.5	109.4
O5	C11	H112	109.5	109.5
C11	C10	C9	107.9	109.5
C11	C10	O4	110.9	109.5
C11	C10	C12	105.7	109.5
C10	C11	H111	109.5	109.5
C10	C11	H112	109.5	109.5
C9	C10	O4	111.6	109.6
C9	C10	C12	110.6	109.2
C10	C9	C8	109.0	109.0
C10	C9	H91C	109.6	109.5
C10	C9	H92C	109.6	109.5
O4	C10	C12	109.9	109.5
C10	O4	H4	109.5	114.0
C10	C12	O6	115.8	109.4
C10	C12	H121	107.8	109.5
C10	C12	H122	107.9	109.5
C9	C8	C7	111.8	109.2
C8	C9	H91C	109.6	109.6
C8	C9	H92C	109.6	109.6
C9	C8	H81C	108.9	109.5
C9	C8	H82C	108.9	109.5
C8	C7	O6	123.7	109.4
C8	C7	C5	98.9	109.5
C7	C8	H81C	108.9	109.5
C7	C8	H82C	108.9	109.5
C8	C7	H7	110.4	109.5
C12	O6	C7	111.2	114.1
O6	C12	H121	107.9	109.5
O6	C12	H122	107.9	109.4
O6	C7	C5	99.3	109.5
O6	C7	H7	111.3	109.5
C7	C5	O3	97.0	109.5
C7	C5	C4	98.0	109.5
C5	C7	H7	111.6	109.5
C7	C5	HA	111.6	109.5
O3	C5	C4	124.3	109.4
C5	O3	C6	116.8	114.1
O3	C5	HA	113.0	109.5
C5	C4	C3	111.0	109.1
C4	C5	HA	110.4	109.5
C5	C4	H41C	109.1	109.5
C5	C4	H42C	109.1	109.6
O3	C6	C2	109.9	109.4
O3	C6	H61C	109.4	109.5
O3	C6	H62C	109.4	109.5
C6	C2	C3	109.1	109.2
C6	C2	O2	110.2	109.5
C6	C2	C1	107.2	109.5
C2	C6	H61C	109.4	109.4
C2	C6	H62C	109.4	109.5
C4	C3	C2	108.6	109.0
C3	C4	H41C	109.1	109.5
C3	C4	H42C	109.1	109.5
C4	C3	H31C	109.7	109.5
C4	C3	H32C	109.7	109.6
C3	C2	O2	111.1	109.5
C3	C2	C1	108.2	109.5
C2	C3	H31C	109.7	109.5
C2	C3	H32C	109.7	109.5
O2	C2	C1	110.9	109.6
C2	O2	H2	109.5	114.0
C2	C1	O1	108.1	109.5
C2	C1	H11C	109.8	109.4
C2	C1	H12C	109.8	109.4
O1	C1	H11C	109.8	109.5
O1	C1	H12C	109.8	109.4
C1	O1	H1	109.5	114.0
H111	C11	H112	109.5	109.5
H91C	C9	H92C	109.5	109.5
H121	C12	H122	109.5	109.5
H81C	C8	H82C	109.5	109.5
H41C	C4	H42C	109.5	109.6
H61C	C6	H62C	109.5	109.6
H31C	C3	H32C	109.4	109.6
H11C	C1	H12C	109.5	109.5

Torsion Angles for 88Q

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C11	C10	C9	187.0	185.0
O5	C11	C10	O4	64.5	64.8
O5	C11	C10	C12	305.4	304.7
C10	C11	O5	H111	240.0	240.0
C10	C11	O5	H112	120.0	120.0
H111	C11	O5	H112	239.9	240.0
C10	C11	O5	H5	180.0	180.0
O5	C11	C10	H111	120.0	120.0
O5	C11	C10	H112	240.0	240.0
C9	C10	C11	O4	122.5	120.2
C9	C10	C11	C12	241.6	240.3
C11	C10	C9	C8	174.8	63.0
C11	C10	C9	H91C	294.7	182.8
C11	C10	C9	H92C	54.9	303.0
O4	C10	C11	C12	119.1	120.1
C11	C10	O4	H4	180.0	300.1
C11	C10	C12	O6	175.4	297.6
C11	C10	C12	H121	296.3	57.6
C11	C10	C12	H122	54.4	177.7
H111	C11	C10	H112	120.0	120.0
C11	C10	C9	O4	237.9	239.9
C11	C10	C9	C12	115.2	119.9
C9	C10	C11	H111	67.0	65.0
C9	C10	C11	H112	307.0	305.0
O4	C10	C9	C12	237.3	240.0
C9	C10	O4	H4	59.6	179.9
C9	C10	C12	O6	292.0	57.6
C9	C10	C12	H121	52.9	177.6
C9	C10	C12	H122	171.0	297.6
C10	C9	C8	C7	344.2	57.0
C8	C9	C10	H91C	240.1	240.1
C8	C9	C10	H92C	119.9	120.0
C10	C9	C8	H81C	104.5	176.9
C10	C9	C8	H82C	223.9	297.0
H91C	C9	C10	H92C	239.8	239.8
C11	C10	O4	C9	120.4	120.2
C11	C10	O4	C12	243.5	239.9
O4	C10	C11	H111	304.5	304.8
O4	C10	C11	H112	184.4	184.8
C9	C10	O4	C12	123.1	119.8
O4	C10	C9	C8	296.9	183.1
O4	C10	C9	H91C	56.8	303.0
O4	C10	C9	H92C	177.0	63.1
O4	C10	C12	O6	55.7	177.6
O4	C10	C12	H121	176.6	297.6
O4	C10	C12	H122	294.7	57.6
C11	C10	C12	C9	243.4	240.1
C11	C10	C12	O4	119.7	120.1
C12	C10	C11	H111	185.4	184.7
C12	C10	C11	H112	65.4	64.7
C9	C10	C12	O4	236.3	240.0
C12	C10	C9	C8	59.6	303.0
C12	C10	C9	H91C	179.6	62.9
C12	C10	C9	H92C	299.7	183.1
C12	C10	O4	H4	296.5	60.2
C10	C12	O6	C7	25.3	298.9
O6	C12	C10	H121	239.1	240.0
O6	C12	C10	H122	120.9	119.9
H121	C12	C10	H122	241.9	239.9
C8	C9	C10	O4	296.9	183.1
C8	C9	C10	C12	59.6	303.0
C10	C9	C8	H91C	119.9	119.9
C10	C9	C8	H92C	240.1	240.1
C9	C8	C7	O6	336.0	302.4
C9	C8	C7	C5	228.5	182.4
C7	C8	C9	H81C	239.7	240.1
C7	C8	C9	H82C	120.3	119.9
C9	C8	C7	H7	111.4	62.4
H91C	C9	C8	H92C	120.2	120.2
H81C	C8	C9	H82C	240.7	239.8
C7	C8	C9	H91C	224.3	297.1
C7	C8	C9	H92C	104.1	176.9
C9	C8	C7	H81C	120.3	119.9
C9	C8	C7	H82C	239.7	240.1
C12	O6	C7	C8	21.0	61.1
O6	C7	C8	C5	107.5	120.0
O6	C7	C8	H7	224.5	240.0
C8	C7	C5	O3	284.9	55.0
C8	C7	C5	C4	51.1	175.0
C5	C7	C8	H7	117.1	120.0
C8	C7	C5	HA	166.8	295.0
H81C	C8	C7	H82C	119.3	120.2
C10	C12	O6	H121	120.9	120.0
C10	C12	O6	H122	239.1	240.0
C8	C7	O6	C12	21.0	61.1
C12	O6	C7	C5	128.2	181.1
C12	O6	C7	H7	245.8	301.1
H121	C12	O6	H122	118.2	120.0
C8	C7	O6	C5	252.7	240.0
O6	C7	C8	H81C	215.6	182.5
O6	C7	C8	H82C	96.3	62.3
C8	C7	O6	H7	135.2	120.0
C7	O6	C12	H121	264.4	178.9
C7	O6	C12	H122	146.3	58.9
O6	C7	C5	O3	158.4	295.0
O6	C7	C5	C4	284.6	55.0
C5	C7	O6	H7	242.4	240.0
O6	C7	C5	HA	40.3	175.0
C8	C7	C5	O6	126.5	120.0
C5	C7	C8	H81C	108.2	62.5
C5	C7	C8	H82C	348.8	302.3
C8	C7	C5	H7	243.8	240.0
O6	C7	C5	H7	117.4	120.0
O3	C5	C7	C4	233.8	240.1
C7	C5	O3	C6	126.4	181.1
O3	C5	C7	HA	118.1	120.0
C7	C5	C4	C3	232.8	182.4
C4	C5	C7	HA	244.3	240.0
C7	C5	C4	H41C	353.0	302.3
C7	C5	C4	H42C	112.6	62.5
C7	C5	O3	C4	104.7	120.0
O3	C5	C7	H7	41.1	175.0
C7	C5	O3	HA	243.0	240.0
O3	C5	C4	C3	337.0	302.4
C4	C5	O3	HA	138.3	120.0
O3	C5	C4	H41C	97.2	62.2
O3	C5	C4	H42C	216.8	182.5
C5	O3	C6	C2	23.0	298.9
C5	O3	C6	H61C	143.1	58.8
C5	O3	C6	H62C	263.0	178.9
C7	C5	C4	O3	255.8	240.0
C4	C5	C7	H7	167.3	295.0
C7	C5	C4	HA	116.6	120.0
C4	C5	O3	C6	21.7	61.2
O3	C5	C4	HA	220.8	240.0
C5	C4	C3	C2	340.0	57.0
C3	C4	C5	H41C	239.8	240.2
C3	C4	C5	H42C	120.2	119.9
C5	C4	C3	H31C	99.8	176.8
C5	C4	C3	H32C	220.1	297.1
H41C	C4	C5	H42C	240.4	239.7
C6	O3	C5	C4	21.7	61.2
C6	O3	C5	HA	243.4	301.2
O3	C6	C2	C3	293.2	57.6
O3	C6	C2	O2	55.4	177.5
O3	C6	C2	C1	176.3	297.7
C2	C6	O3	H61C	239.9	240.1
C2	C6	O3	H62C	120.1	120.0
H61C	C6	O3	H62C	240.1	239.9
O3	C6	C2	H61C	120.1	119.9
O3	C6	C2	H62C	239.9	240.0
C4	C3	C2	C6	63.1	303.0
C3	C2	C6	O2	237.8	240.1
C3	C2	C6	C1	116.9	119.9
C6	C2	C3	H31C	303.3	183.2
C6	C2	C3	H32C	183.0	62.9
O2	C2	C6	C1	239.2	239.8
C6	C2	O2	H2	180.0	60.0
C6	C2	C1	O1	304.0	305.0
C6	C2	C1	H11C	63.8	65.0
C6	C2	C1	H12C	184.2	185.1
H61C	C6	C2	H62C	119.9	120.1
C3	C4	C5	HA	116.2	62.4
C5	C4	C3	H41C	120.2	119.9
C5	C4	C3	H42C	239.8	240.1
C6	C2	C3	C4	63.1	303.0
C4	C3	C2	O2	301.4	183.1
C4	C3	C2	C1	179.5	62.9
C2	C3	C4	H31C	240.1	240.2
C2	C3	C4	H32C	119.9	119.9
H41C	C4	C3	H42C	119.6	120.2
H31C	C3	C4	H32C	239.7	239.7
C6	C2	C3	O2	121.7	119.9
C6	C2	C3	C1	243.7	240.1
C3	C2	C6	H61C	173.2	297.7
C3	C2	C6	H62C	53.3	177.6
C2	C3	C4	H41C	219.8	297.1
C2	C3	C4	H42C	100.2	176.9
C4	C3	C2	H31C	119.9	119.8
C4	C3	C2	H32C	240.1	240.1
O2	C2	C3	C1	122.0	120.2
C3	C2	O2	H2	301.1	179.7
C3	C2	C1	O1	186.4	185.3
C3	C2	C1	H11C	306.2	305.3
C3	C2	C1	H12C	66.6	65.3
H31C	C3	C2	H32C	120.3	120.3
C6	C2	O2	C3	238.9	240.3
C6	C2	O2	C1	118.6	120.2
O2	C2	C6	H61C	295.4	57.6
O2	C2	C6	H62C	175.5	297.5
C3	C2	O2	C1	239.7	239.9
O2	C2	C3	H31C	181.5	63.3
O2	C2	C3	H32C	61.3	303.0
O2	C2	C1	O1	64.4	65.2
O2	C2	C1	H11C	184.2	185.2
O2	C2	C1	H12C	304.6	305.2
C6	C2	C1	C3	117.6	119.7
C6	C2	C1	O2	239.6	239.8
C1	C2	C6	H61C	56.2	177.8
C1	C2	C6	H62C	296.3	57.7
C3	C2	C1	O2	122.0	120.1
C1	C2	C3	H31C	59.6	303.1
C1	C2	C3	H32C	299.3	182.8
C1	C2	O2	H2	61.4	299.8
O1	C1	C2	H11C	240.2	240.0
O1	C1	C2	H12C	119.8	119.9
C2	C1	O1	H1	180.0	180.0
H11C	C1	C2	H12C	239.6	240.0
C2	C1	O1	H11C	119.8	120.0
C2	C1	O1	H12C	240.2	240.1
H11C	C1	O1	H12C	120.5	120.1
H5	O5	C11	C10	180.0	180.0
H5	O5	C11	H111	300.0	300.0
H5	O5	C11	H112	60.0	60.0
O5	C11	H111	C10	240.2	240.0
H111	C11	O5	H5	300.0	300.0
O5	C11	H111	H112	120.1	120.0
H111	C11	C10	C9	67.0	65.0
H111	C11	C10	O4	304.5	304.8
H111	C11	C10	C12	185.4	184.7
C10	C11	H111	H112	239.9	240.0
O5	C11	H112	C10	119.8	120.0
H112	C11	O5	H5	60.0	60.0
O5	C11	H112	H111	239.9	240.0
H112	C11	C10	C9	307.0	305.0
H112	C11	C10	O4	184.4	184.8
H112	C11	C10	C12	65.4	64.7
C10	C11	H112	H111	120.1	120.0
H91C	C9	C10	O4	56.8	303.0
H91C	C9	C10	C12	179.6	62.9
C10	C9	H91C	C8	240.4	240.4
C10	C9	H91C	H92C	120.2	120.2
H91C	C9	C8	C7	224.3	297.1
C8	C9	H91C	H92C	239.8	239.7
H91C	C9	C8	H81C	344.6	57.0
H91C	C9	C8	H82C	104.0	177.2
H92C	C9	C10	O4	177.0	63.1
H92C	C9	C10	C12	299.7	183.1
C10	C9	H92C	C8	119.6	119.6
C10	C9	H92C	H91C	239.8	239.8
H92C	C9	C8	C7	104.1	176.9
C8	C9	H92C	H91C	120.2	120.2
H92C	C9	C8	H81C	224.5	296.8
H92C	C9	C8	H82C	343.8	56.9
H4	O4	C10	C12	296.5	60.2
C10	C12	H121	O6	234.2	240.1
C10	C12	H121	H122	117.1	120.1
H121	C12	O6	C7	264.4	178.9
O6	C12	H121	H122	242.9	240.0
C10	C12	H122	O6	125.8	119.9
C10	C12	H122	H121	242.9	239.9
H122	C12	O6	C7	146.3	58.9
O6	C12	H122	H121	117.1	120.0
C9	C8	H81C	C7	237.9	240.3
H81C	C8	C9	H91C	344.6	57.0
H81C	C8	C9	H92C	224.5	296.8
C9	C8	H81C	H82C	118.9	120.1
H81C	C8	C7	O6	215.6	182.5
H81C	C8	C7	C5	108.2	62.5
C7	C8	H81C	H82C	241.1	239.9
H81C	C8	C7	H7	351.1	302.5
C9	C8	H82C	C7	122.1	119.7
H82C	C8	C9	H91C	104.0	177.2
H82C	C8	C9	H92C	343.8	56.9
C9	C8	H82C	H81C	241.1	239.9
H82C	C8	C7	O6	96.3	62.3
H82C	C8	C7	C5	348.8	302.3
C7	C8	H82C	H81C	119.0	120.2
H82C	C8	C7	H7	231.8	182.3
C8	C7	H7	O6	218.7	240.0
C8	C7	H7	C5	108.9	120.0
H7	C7	C8	H81C	351.1	302.5
H7	C7	C8	H82C	231.8	182.3
O6	C7	H7	C5	250.2	240.0
H7	C7	C5	O3	41.1	175.0
H7	C7	C5	C4	167.3	295.0
H7	C7	C5	HA	283.0	55.0
C7	C5	HA	O3	108.1	120.0
C7	C5	HA	C4	252.2	240.0
HA	C5	C7	H7	283.0	55.0
O3	C5	HA	C4	144.1	120.0
HA	C5	O3	C6	243.4	301.2
HA	C5	C4	C3	116.2	62.4
HA	C5	C4	H41C	236.4	182.2
HA	C5	C4	H42C	356.0	302.5
C5	C4	H41C	C3	238.6	240.4
H41C	C4	C5	HA	236.4	182.2
C5	C4	H41C	H42C	119.3	120.2
H41C	C4	C3	C2	219.8	297.1
C3	C4	H41C	H42C	240.7	239.9
H41C	C4	C3	H31C	339.6	57.0
H41C	C4	C3	H32C	99.9	177.3
C5	C4	H42C	C3	121.4	119.7
H42C	C4	C5	HA	356.0	302.5
C5	C4	H42C	H41C	240.7	239.8
H42C	C4	C3	C2	100.2	176.9
C3	C4	H42C	H41C	119.3	120.1
H42C	C4	C3	H31C	220.0	296.8
H42C	C4	C3	H32C	340.3	57.1
O3	C6	H61C	C2	239.6	240.1
O3	C6	H61C	H62C	119.8	120.1
H61C	C6	C2	C3	173.2	297.7
H61C	C6	C2	O2	295.4	57.6
H61C	C6	C2	C1	56.2	177.8
C2	C6	H61C	H62C	240.2	240.0
O3	C6	H62C	C2	120.4	119.9
O3	C6	H62C	H61C	240.2	239.9
H62C	C6	C2	C3	53.3	177.6
H62C	C6	C2	O2	175.5	297.5
H62C	C6	C2	C1	296.3	57.7
C2	C6	H62C	H61C	119.8	120.0
C4	C3	H31C	C2	240.8	240.5
H31C	C3	C4	H41C	339.6	57.0
H31C	C3	C4	H42C	220.0	296.8
C4	C3	H31C	H32C	120.4	120.3
H31C	C3	C2	O2	181.5	63.3
H31C	C3	C2	C1	59.6	303.1
C2	C3	H31C	H32C	239.6	239.8
C4	C3	H32C	C2	119.2	119.6
H32C	C3	C4	H41C	99.9	177.3
H32C	C3	C4	H42C	340.3	57.1
C4	C3	H32C	H31C	239.6	239.8
H32C	C3	C2	O2	61.3	303.0
H32C	C3	C2	C1	299.3	182.8
C2	C3	H32C	H31C	120.4	120.2
H2	O2	C2	C1	61.4	299.8
C2	C1	H11C	O1	241.3	240.0
C2	C1	H11C	H12C	120.6	120.0
O1	C1	H11C	H12C	239.3	240.0
H11C	C1	O1	H1	60.2	60.0
C2	C1	H12C	O1	118.7	119.9
C2	C1	H12C	H11C	239.4	240.0
O1	C1	H12C	H11C	120.7	120.1
H12C	C1	O1	H1	299.8	299.9
H1	O1	C1	H11C	60.2	60.0
H1	O1	C1	H12C	299.8	299.9