PDB Chemical Component 88G
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 88G
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAE |
CAH |
1.473 |
1.383 |
CAE |
CAI |
1.422 |
1.384 |
CAH |
CAO |
1.436 |
1.380 |
CAI |
CAP |
1.438 |
1.379 |
CAO |
CAY |
1.430 |
1.395 |
CAP |
CAY |
1.483 |
1.396 |
CAY |
CAU |
1.468 |
1.478 |
CAU |
N |
1.443 |
1.348 |
CAU |
OAB |
1.290 |
1.216 |
N |
CA |
1.574 |
1.465 |
O |
C |
1.294 |
1.213 |
CA |
CB |
1.597 |
1.531 |
CA |
C |
1.615 |
1.506 |
CB |
CG |
1.423 |
1.506 |
C |
NAS |
1.427 |
1.348 |
CAA |
CAW |
1.420 |
1.507 |
CAW |
CAL |
1.453 |
1.380 |
CAW |
CAZ |
1.461 |
1.389 |
NAS |
CAZ |
1.396 |
1.399 |
CG |
CD1 |
1.434 |
1.383 |
CG |
CD2 |
1.451 |
1.383 |
CAL |
CAJ |
1.425 |
1.383 |
CAZ |
CAQ |
1.434 |
1.388 |
CD1 |
CE1 |
1.427 |
1.382 |
CAJ |
CAK |
1.450 |
1.382 |
CAQ |
CAK |
1.446 |
1.382 |
CD2 |
CE2 |
1.452 |
1.382 |
CE1 |
CZ |
1.463 |
1.382 |
CE2 |
CZ |
1.444 |
1.382 |
CAA |
H1 |
1.100 |
1.090 |
CAA |
H2 |
1.099 |
1.090 |
CAA |
H3 |
1.100 |
1.091 |
CAL |
H4 |
1.080 |
1.080 |
CAJ |
H5 |
1.080 |
1.080 |
CAK |
H6 |
1.080 |
1.080 |
CAQ |
H7 |
1.080 |
1.080 |
NAS |
H8 |
0.999 |
0.970 |
CA |
H9 |
1.100 |
1.090 |
CB |
H10 |
1.100 |
1.090 |
CB |
H11 |
1.100 |
1.090 |
CD1 |
H12 |
1.080 |
1.080 |
CE1 |
H13 |
1.080 |
1.080 |
CZ |
H14 |
1.080 |
1.080 |
CE2 |
H15 |
1.080 |
1.081 |
CD2 |
H16 |
1.080 |
1.080 |
N |
H17 |
1.000 |
0.970 |
CAO |
H18 |
1.080 |
1.080 |
CAH |
H19 |
1.080 |
1.080 |
CAE |
H20 |
1.080 |
1.080 |
CAI |
H21 |
1.080 |
1.081 |
CAP |
H22 |
1.080 |
1.080 |
Bond Angles for 88G
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAE |
CAH |
H19 |
117.1 |
120.0 |
CAE |
CAI |
CAP |
114.0 |
120.2 |
CAI |
CAE |
H20 |
120.0 |
119.9 |
CAE |
CAI |
H21 |
123.0 |
119.9 |
CAH |
CAO |
H18 |
122.3 |
120.1 |
CAP |
CAI |
H21 |
123.0 |
119.9 |
CAI |
CAP |
H22 |
116.5 |
120.1 |
CAU |
N |
H17 |
118.6 |
120.0 |
N |
CA |
H9 |
105.6 |
109.5 |
CA |
CB |
CG |
107.9 |
109.5 |
CB |
CA |
H9 |
105.4 |
109.5 |
CA |
CB |
H10 |
109.9 |
109.4 |
CA |
CB |
H11 |
109.9 |
109.5 |
CB |
CG |
CD1 |
118.7 |
120.0 |
CB |
CG |
CD2 |
120.2 |
120.0 |
CG |
CB |
H10 |
109.9 |
109.5 |
CG |
CB |
H11 |
109.9 |
109.5 |
C |
NAS |
H8 |
125.0 |
120.0 |
CAA |
CAW |
CAL |
121.2 |
120.0 |
CAA |
CAW |
CAZ |
117.6 |
120.0 |
CAW |
CAA |
H1 |
109.5 |
109.5 |
CAW |
CAA |
H2 |
109.5 |
109.5 |
CAW |
CAA |
H3 |
109.5 |
109.4 |
CAL |
CAW |
CAZ |
121.1 |
120.0 |
CAW |
CAL |
CAJ |
119.3 |
120.1 |
CAW |
CAL |
H4 |
120.4 |
120.0 |
CAW |
CAZ |
CAQ |
119.3 |
119.8 |
CD1 |
CG |
CD2 |
120.9 |
120.0 |
CG |
CD1 |
CE1 |
119.0 |
120.0 |
CG |
CD1 |
H12 |
120.5 |
120.0 |
CG |
CD2 |
CE2 |
121.4 |
120.0 |
CG |
CD2 |
H16 |
119.3 |
120.0 |
CAL |
CAJ |
CAK |
119.6 |
120.2 |
CAJ |
CAL |
H4 |
120.3 |
119.9 |
CAL |
CAJ |
H5 |
120.2 |
120.0 |
CAZ |
CAQ |
H7 |
120.4 |
120.0 |
CD1 |
CE1 |
CZ |
119.9 |
120.0 |
CE1 |
CD1 |
H12 |
120.5 |
120.1 |
CD1 |
CE1 |
H13 |
120.1 |
120.0 |
CAK |
CAJ |
H5 |
120.2 |
119.9 |
CAJ |
CAK |
H6 |
119.2 |
120.0 |
CAQ |
CAK |
H6 |
119.2 |
119.9 |
CD2 |
CE2 |
H15 |
121.8 |
120.0 |
CZ |
CE1 |
H13 |
120.1 |
120.0 |
CE1 |
CZ |
H14 |
118.9 |
120.0 |
CE2 |
CZ |
H14 |
118.8 |
120.0 |
H1 |
CAA |
H2 |
109.5 |
109.5 |
H1 |
CAA |
H3 |
109.5 |
109.5 |
H2 |
CAA |
H3 |
109.5 |
109.5 |
H10 |
CB |
H11 |
109.5 |
109.4 |
Torsion Angles for 88G
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAE |
CAH |
CAO |
H18 |
177.9 |
180.1 |
CAI |
CAE |
CAH |
H19 |
181.6 |
180.0 |
CAP |
CAI |
CAE |
H21 |
180.0 |
179.7 |
CAE |
CAI |
CAP |
H22 |
179.2 |
180.0 |
CAP |
CAI |
CAE |
H20 |
180.0 |
179.7 |
CAE |
CAI |
CAP |
H21 |
180.0 |
180.3 |
CAY |
CAU |
N |
H17 |
1.9 |
0.1 |
CAU |
N |
CA |
H9 |
304.2 |
35.0 |
OAB |
CAU |
N |
H17 |
183.1 |
180.0 |
CB |
CA |
N |
H9 |
241.7 |
240.0 |
N |
CA |
CB |
H10 |
300.2 |
185.0 |
N |
CA |
CB |
H11 |
60.7 |
305.0 |
O |
C |
NAS |
H8 |
171.4 |
185.6 |
N |
CA |
CB |
H9 |
118.4 |
120.0 |
CA |
CB |
CG |
CD1 |
93.8 |
90.0 |
CA |
CB |
CG |
CD2 |
277.6 |
269.7 |
CG |
CB |
CA |
H10 |
240.3 |
240.0 |
CG |
CB |
CA |
H11 |
119.7 |
120.0 |
H10 |
CB |
CA |
H11 |
239.5 |
240.1 |
CA |
C |
NAS |
H8 |
354.7 |
5.5 |
CG |
CB |
CA |
H9 |
62.0 |
305.0 |
CA |
CB |
CG |
H10 |
119.8 |
120.0 |
CA |
CB |
CG |
H11 |
240.3 |
240.0 |
CD1 |
CG |
CB |
CD2 |
176.2 |
180.4 |
CB |
CG |
CD1 |
CE1 |
184.5 |
180.0 |
CB |
CG |
CD1 |
H12 |
4.5 |
359.9 |
CB |
CG |
CD2 |
CE2 |
176.8 |
179.8 |
CB |
CG |
CD2 |
H16 |
356.8 |
0.1 |
H10 |
CB |
CG |
H11 |
120.5 |
120.0 |
CAL |
CAW |
CAA |
CAZ |
179.7 |
180.3 |
CAA |
CAW |
CAL |
CAJ |
179.9 |
180.0 |
CAA |
CAW |
CAL |
H4 |
359.9 |
0.1 |
CAA |
CAW |
CAZ |
CAQ |
180.9 |
179.7 |
H1 |
CAA |
CAW |
H2 |
240.0 |
240.0 |
H1 |
CAA |
CAW |
H3 |
120.0 |
120.0 |
H2 |
CAA |
CAW |
H3 |
240.0 |
240.0 |
CAA |
CAW |
CAL |
CAZ |
180.3 |
179.7 |
CAL |
CAW |
CAA |
H1 |
89.8 |
89.9 |
CAL |
CAW |
CAA |
H2 |
209.8 |
210.0 |
CAL |
CAW |
CAA |
H3 |
329.8 |
329.9 |
CAL |
CAW |
CAZ |
CAQ |
1.2 |
359.5 |
CAW |
CAL |
CAJ |
CAK |
359.1 |
0.1 |
CAJ |
CAL |
CAW |
H4 |
180.0 |
179.9 |
CAW |
CAL |
CAJ |
H5 |
179.1 |
180.0 |
CAA |
CAW |
CAZ |
CAL |
179.7 |
180.3 |
CAZ |
CAW |
CAA |
H1 |
270.2 |
269.7 |
CAZ |
CAW |
CAA |
H2 |
30.1 |
29.7 |
CAZ |
CAW |
CAA |
H3 |
150.1 |
149.7 |
CAZ |
CAW |
CAL |
CAJ |
359.6 |
0.2 |
CAZ |
CAW |
CAL |
H4 |
179.6 |
180.3 |
CAW |
CAZ |
CAQ |
H7 |
179.3 |
180.3 |
NAS |
CAZ |
CAQ |
H7 |
3.6 |
360.0 |
CB |
CG |
CD1 |
CD2 |
183.8 |
179.6 |
CD1 |
CG |
CB |
H10 |
334.1 |
330.1 |
CD1 |
CG |
CB |
H11 |
213.6 |
210.1 |
CD1 |
CG |
CD2 |
CE2 |
0.7 |
359.5 |
CD1 |
CG |
CD2 |
H16 |
180.7 |
179.7 |
CG |
CD1 |
CE1 |
CZ |
358.2 |
360.0 |
CE1 |
CD1 |
CG |
H12 |
180.0 |
180.1 |
CG |
CD1 |
CE1 |
H13 |
178.2 |
179.9 |
CB |
CG |
CD2 |
CD1 |
176.1 |
180.4 |
CD2 |
CG |
CB |
H10 |
157.9 |
149.7 |
CD2 |
CG |
CB |
H11 |
37.4 |
29.7 |
CD2 |
CG |
CD1 |
CE1 |
0.7 |
0.3 |
CD2 |
CG |
CD1 |
H12 |
180.7 |
180.3 |
CG |
CD2 |
CE2 |
H15 |
179.2 |
180.3 |
CAJ |
CAL |
CAW |
CAZ |
359.6 |
0.2 |
CAW |
CAL |
CAJ |
H4 |
180.0 |
180.1 |
CAK |
CAJ |
CAL |
H5 |
180.0 |
180.1 |
CAL |
CAJ |
CAK |
H6 |
181.4 |
180.0 |
CAZ |
CAQ |
CAK |
H6 |
179.5 |
179.7 |
CE1 |
CD1 |
CG |
CD2 |
0.7 |
0.3 |
CG |
CD1 |
CE1 |
H12 |
180.0 |
179.9 |
CZ |
CE1 |
CD1 |
H13 |
180.0 |
180.0 |
CD1 |
CE1 |
CZ |
H14 |
181.7 |
180.0 |
CAK |
CAJ |
CAL |
H4 |
179.1 |
180.0 |
CAL |
CAJ |
CAK |
H5 |
180.0 |
179.9 |
CAQ |
CAK |
CAJ |
H6 |
180.0 |
180.0 |
CAW |
CAZ |
CAQ |
CAK |
359.3 |
0.6 |
CAQ |
CAK |
CAJ |
H5 |
181.4 |
180.0 |
CAJ |
CAK |
CAQ |
H6 |
180.0 |
180.0 |
CG |
CD2 |
CE2 |
H16 |
180.0 |
180.2 |
CD2 |
CE2 |
CZ |
H14 |
179.6 |
179.8 |
CZ |
CE1 |
CD1 |
H12 |
178.2 |
180.0 |
CD1 |
CE1 |
CZ |
H13 |
180.0 |
180.0 |
CE2 |
CZ |
CE1 |
H14 |
180.0 |
180.0 |
CG |
CD2 |
CE2 |
CZ |
359.2 |
0.5 |
CE2 |
CZ |
CE1 |
H13 |
181.7 |
180.0 |
CE1 |
CZ |
CE2 |
H14 |
180.0 |
180.0 |
H1 |
CAA |
CAW |
CAL |
89.8 |
89.9 |
H1 |
CAA |
CAW |
CAZ |
270.2 |
269.7 |
CAW |
CAA |
H1 |
H2 |
120.0 |
120.0 |
CAW |
CAA |
H1 |
H3 |
240.0 |
240.0 |
H2 |
CAA |
H1 |
H3 |
120.0 |
120.0 |
H2 |
CAA |
CAW |
CAL |
209.8 |
210.0 |
H2 |
CAA |
CAW |
CAZ |
30.1 |
29.7 |
CAW |
CAA |
H2 |
H1 |
240.0 |
240.0 |
CAW |
CAA |
H2 |
H3 |
120.0 |
120.0 |
H1 |
CAA |
H2 |
H3 |
240.0 |
240.0 |
H3 |
CAA |
CAW |
CAL |
329.8 |
329.9 |
H3 |
CAA |
CAW |
CAZ |
150.1 |
149.7 |
CAW |
CAA |
H3 |
H1 |
120.0 |
120.0 |
CAW |
CAA |
H3 |
H2 |
240.0 |
240.0 |
H1 |
CAA |
H3 |
H2 |
120.0 |
120.0 |
H4 |
CAL |
CAW |
CAZ |
179.6 |
180.3 |
CAW |
CAL |
H4 |
CAJ |
180.0 |
179.9 |
H4 |
CAL |
CAJ |
CAK |
179.1 |
180.0 |
H4 |
CAL |
CAJ |
H5 |
359.1 |
359.9 |
CAL |
CAJ |
H5 |
CAK |
180.0 |
180.1 |
H5 |
CAJ |
CAL |
H4 |
359.1 |
359.9 |
H5 |
CAJ |
CAK |
H6 |
1.4 |
0.0 |
H6 |
CAK |
CAJ |
H5 |
1.4 |
0.0 |
H7 |
CAQ |
CAK |
H6 |
359.5 |
360.0 |
H9 |
CA |
CB |
CG |
62.0 |
305.0 |
H9 |
CA |
CB |
H10 |
181.8 |
65.0 |
H9 |
CA |
CB |
H11 |
302.3 |
185.0 |
CA |
CB |
H10 |
CG |
241.5 |
240.0 |
H10 |
CB |
CA |
H9 |
181.8 |
65.0 |
CA |
CB |
H10 |
H11 |
120.8 |
120.0 |
H10 |
CB |
CG |
CD1 |
334.1 |
330.1 |
H10 |
CB |
CG |
CD2 |
157.9 |
149.7 |
CG |
CB |
H10 |
H11 |
239.3 |
240.0 |
CA |
CB |
H11 |
CG |
118.5 |
120.0 |
H11 |
CB |
CA |
H9 |
302.3 |
185.0 |
CA |
CB |
H11 |
H10 |
239.2 |
240.1 |
H11 |
CB |
CG |
CD1 |
213.6 |
210.1 |
H11 |
CB |
CG |
CD2 |
37.4 |
29.7 |
CG |
CB |
H11 |
H10 |
120.7 |
120.0 |
H12 |
CD1 |
CG |
CD2 |
180.7 |
180.3 |
CG |
CD1 |
H12 |
CE1 |
180.0 |
180.1 |
H12 |
CD1 |
CE1 |
CZ |
178.2 |
180.0 |
H12 |
CD1 |
CE1 |
H13 |
358.1 |
0.0 |
CD1 |
CE1 |
H13 |
CZ |
180.0 |
180.0 |
H13 |
CE1 |
CD1 |
H12 |
358.1 |
0.0 |
H13 |
CE1 |
CZ |
H14 |
1.7 |
0.0 |
H14 |
CZ |
CE1 |
H13 |
1.7 |
0.0 |
H15 |
CE2 |
CZ |
H14 |
359.6 |
360.0 |
CG |
CD2 |
H16 |
CE2 |
180.0 |
179.8 |
H16 |
CD2 |
CE2 |
H15 |
359.2 |
0.0 |
H17 |
N |
CA |
H9 |
124.2 |
214.9 |
H19 |
CAH |
CAO |
H18 |
357.9 |
360.0 |
H20 |
CAE |
CAH |
H19 |
1.6 |
0.1 |
H20 |
CAE |
CAI |
CAP |
180.0 |
179.7 |
H20 |
CAE |
CAI |
H21 |
360.0 |
360.0 |
CAE |
CAI |
H21 |
CAP |
180.0 |
179.7 |
H21 |
CAI |
CAE |
H20 |
360.0 |
360.0 |
H21 |
CAI |
CAP |
H22 |
359.2 |
359.7 |
H22 |
CAP |
CAI |
H21 |
359.2 |
359.7 |