PDB Chemical Component 879

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 879

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.393	1.384
C1	C4	1.394	1.380
N1	C14	1.350	1.322
N1	C16	1.348	1.318
O1	C19	1.378	1.359
O1	C20	1.368	1.359
CL1	C21	1.728	1.736
C2	C9	1.394	1.383
N2	C15	1.348	1.323
N2	C16	1.346	1.319
C3	C12	1.389	1.388
C3	C13	1.391	1.384
N3	C24	1.355	1.320
N3	C25	1.354	1.324
C4	C18	1.402	1.396
N4	C22	1.392	1.371
N4	C23	1.384	1.372
N4	C26	1.461	1.465
C5	C7	1.401	1.378
C5	C17	1.407	1.396
N5	C25	1.391	1.390
C6	C8	1.394	1.378
C6	C17	1.396	1.396
C7	C19	1.398	1.389
C8	C19	1.393	1.389
C9	C21	1.397	1.380
C10	C11	1.412	1.400
C10	C22	1.386	1.364
C11	C23	1.385	1.365
C12	C24	1.389	1.381
C13	C25	1.394	1.391
C14	C20	1.383	1.392
C15	C20	1.381	1.391
C17	C22	1.467	1.477
C18	C21	1.403	1.397
C18	C23	1.463	1.477
C24	C26	1.503	1.506
C1	H1	1.080	1.080
C2	H2	1.080	1.080
C3	H3	1.080	1.080
C4	H4	1.080	1.080
C5	H5	1.080	1.080
N5	HN5	1.000	0.970
N5	HN5A	1.000	0.969
C6	H6	1.080	1.079
C7	H7	1.080	1.080
C8	H8	1.080	1.080
C9	H9	1.080	1.080
C10	H10	1.080	1.080
C11	H11	1.080	1.080
C12	H12	1.080	1.080
C13	H13	1.080	1.079
C14	H14	1.080	1.080
C15	H15	1.080	1.079
C16	H16	1.080	1.080
C26	H26	1.100	1.090
C26	H26A	1.100	1.090

Bond Angles for 879

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C4	120.4	120.2
C1	C2	C9	120.1	120.3
C2	C1	H1	119.8	119.9
C1	C2	H2	119.9	119.9
C1	C4	C18	120.1	119.9
C4	C1	H1	119.8	119.9
C1	C4	H4	120.0	120.0
C14	N1	C16	115.0	120.9
N1	C14	C20	123.5	119.0
N1	C14	H14	118.3	120.5
N1	C16	N2	127.0	121.9
N1	C16	H16	116.5	119.1
C19	O1	C20	122.1	118.0
O1	C19	C7	124.3	119.9
O1	C19	C8	115.5	119.9
O1	C20	C14	125.0	120.9
O1	C20	C15	119.1	120.8
CL1	C21	C9	117.8	120.1
CL1	C21	C18	121.4	120.1
C2	C9	C21	119.6	120.2
C9	C2	H2	120.0	119.9
C2	C9	H9	120.2	119.9
C15	N2	C16	115.1	120.9
N2	C15	C20	123.5	119.0
N2	C15	H15	118.3	120.5
N2	C16	H16	116.5	119.0
C12	C3	C13	120.0	118.5
C3	C12	C24	118.2	119.3
C12	C3	H3	120.0	120.8
C3	C12	H12	120.9	120.3
C3	C13	C25	118.7	119.1
C13	C3	H3	120.0	120.7
C3	C13	H13	120.6	120.5
C24	N3	C25	118.9	121.7
N3	C24	C12	122.5	120.8
N3	C24	C26	117.7	119.6
N3	C25	N5	118.6	119.7
N3	C25	C13	121.6	120.6
C4	C18	C21	119.0	119.7
C4	C18	C23	120.1	120.1
C18	C4	H4	120.0	120.1
C22	N4	C23	110.0	108.5
C22	N4	C26	125.9	125.8
N4	C22	C10	106.5	108.1
N4	C22	C17	126.0	125.9
C23	N4	C26	124.0	125.7
N4	C23	C11	107.2	108.1
N4	C23	C18	123.8	126.0
N4	C26	C24	108.6	109.5
N4	C26	H26	109.8	109.5
N4	C26	H26A	109.8	109.4
C7	C5	C17	120.9	119.9
C5	C7	C19	119.3	120.1
C7	C5	H5	119.6	120.0
C5	C7	H7	120.3	120.0
C5	C17	C6	118.6	119.9
C5	C17	C22	122.8	120.1
C17	C5	H5	119.5	120.1
N5	C25	C13	119.7	119.7
C25	N5	HN5	109.5	120.0
C25	N5	HN5A	109.5	120.0
C8	C6	C17	120.8	119.9
C6	C8	C19	120.2	120.1
C8	C6	H6	119.6	120.0
C6	C8	H8	119.9	119.9
C6	C17	C22	118.6	120.0
C17	C6	H6	119.6	120.1
C7	C19	C8	120.2	120.2
C19	C7	H7	120.4	119.9
C19	C8	H8	119.9	119.9
C9	C21	C18	120.8	119.8
C21	C9	H9	120.2	119.9
C11	C10	C22	108.4	107.6
C10	C11	C23	107.8	107.6
C11	C10	H10	125.8	126.2
C10	C11	H11	126.1	126.2
C10	C22	C17	127.4	125.9
C22	C10	H10	125.8	126.2
C11	C23	C18	129.0	125.9
C23	C11	H11	126.1	126.2
C12	C24	C26	119.8	119.6
C24	C12	H12	120.9	120.3
C25	C13	H13	120.6	120.5
C14	C20	C15	115.9	118.3
C20	C14	H14	118.2	120.4
C20	C15	H15	118.2	120.5
C21	C18	C23	120.9	120.2
C24	C26	H26	109.7	109.5
C24	C26	H26A	109.7	109.4
HN5	N5	HN5A	109.5	120.0
H26	C26	H26A	109.2	109.5

Torsion Angles for 879

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C4	C18	0.1	0.1
C4	C1	C2	H1	180.0	180.2
C2	C1	C4	H4	180.1	180.0
C1	C2	C9	C21	0.1	0.1
C9	C2	C1	H2	180.0	180.0
C1	C2	C9	H9	180.1	180.0
C4	C1	C2	C9	359.9	359.9
C2	C1	C4	H1	180.0	179.8
C4	C1	C2	H2	179.9	180.0
C1	C4	C18	C21	359.9	359.9
C1	C4	C18	C23	180.0	180.0
C18	C4	C1	H4	180.0	180.1
C14	N1	C16	N2	359.7	0.0
C14	N1	C16	H16	179.7	180.0
O1	C20	C14	N1	179.2	180.0
N1	C14	C20	C15	359.8	0.0
C20	C14	N1	H14	180.0	179.9
C16	N1	C14	C20	0.2	360.0
C16	N1	C14	H14	180.2	180.0
C15	N2	C16	N1	0.3	0.0
N2	C16	N1	H16	180.0	180.0
C19	O1	C20	C14	104.1	5.4
C19	O1	C20	C15	283.4	185.4
C5	C7	C19	O1	180.1	180.0
C6	C8	C19	O1	179.9	180.0
C7	C19	O1	C8	180.0	180.1
O1	C19	C7	H7	0.1	360.0
O1	C19	C8	H8	359.9	0.1
N1	C14	C20	O1	179.2	180.0
C20	O1	C19	C7	344.9	251.9
C20	O1	C19	C8	165.0	71.9
N2	C15	C20	O1	180.8	180.0
C14	C20	O1	C15	180.7	180.1
O1	C20	C14	H14	359.2	359.9
O1	C20	C15	H15	0.8	0.0
C2	C9	C21	CL1	180.0	179.9
C4	C18	C21	CL1	180.0	180.1
C9	C21	CL1	C18	179.9	179.9
CL1	C21	C9	H9	360.0	0.1
CL1	C21	C18	C23	359.8	360.0
C9	C2	C1	C4	359.9	359.9
C9	C2	C1	H1	179.9	179.7
C1	C2	C9	H2	180.0	180.0
CL1	C21	C9	C2	180.0	179.9
C2	C9	C21	C18	359.9	359.9
C21	C9	C2	H9	180.0	180.1
N1	C16	N2	C15	0.3	0.0
O1	C20	C15	N2	180.8	180.0
C15	N2	C16	H16	180.3	180.0
C14	C20	C15	N2	0.2	360.0
C20	C15	N2	H15	180.0	180.0
N1	C16	N2	H16	180.0	180.0
C16	N2	C15	C20	359.7	360.0
C16	N2	C15	H15	179.7	180.0
C12	C3	C13	C25	0.2	0.0
C13	C3	C12	H3	180.0	180.2
C12	C3	C13	H13	180.3	180.0
N3	C24	C12	C3	0.2	360.0
C3	C12	C24	C26	180.0	180.0
C24	C12	C3	H12	180.0	180.1
C13	C3	C12	C24	359.8	360.0
C12	C3	C13	H3	180.0	179.8
C13	C3	C12	H12	179.8	179.9
N3	C25	C13	C3	359.8	360.0
N5	C25	C13	C3	180.0	179.9
C25	C13	C3	H13	180.0	180.0
C3	C12	C24	N3	0.2	360.0
C24	N3	C25	N5	180.0	180.0
C24	N3	C25	C13	0.3	360.0
N4	C26	C24	N3	198.2	305.0
C12	C24	N3	C26	179.8	180.1
N3	C24	C12	H12	180.2	180.0
N3	C24	C26	H26	78.2	185.0
N3	C24	C26	H26A	318.2	65.0
C3	C13	C25	N3	359.8	360.0
C25	N3	C24	C12	359.7	0.1
C25	N3	C24	C26	179.9	180.0
N5	C25	N3	C13	179.8	180.0
N3	C25	N5	HN5	0.0	0.0
N3	C25	N5	HN5A	120.0	179.9
N3	C25	C13	H13	179.7	180.0
C18	C4	C1	H1	180.1	180.3
C1	C4	C18	H4	180.0	179.9
CL1	C21	C18	C4	180.0	180.1
N4	C23	C18	C4	118.8	58.2
C9	C21	C18	C4	0.2	0.1
C11	C23	C18	C4	298.6	238.1
C21	C18	C4	C23	179.8	179.9
C23	N4	C22	C26	179.4	180.3
C22	N4	C23	C11	0.1	0.0
C22	N4	C23	C18	179.9	179.9
C22	N4	C26	C24	80.1	83.9
C22	N4	C26	H26	200.1	204.0
C22	N4	C26	H26A	320.1	324.0
C5	C17	C22	N4	316.6	215.8
C6	C17	C22	N4	136.0	35.8
C11	C10	C22	N4	0.0	359.9
C10	C22	N4	C17	179.8	180.1
N4	C22	C10	H10	180.1	180.0
C4	C18	C23	N4	118.8	58.2
C22	N4	C23	C26	180.6	179.7
C23	N4	C22	C10	359.9	0.0
C23	N4	C22	C17	180.1	179.9
C23	N4	C26	C24	260.8	263.6
C23	N4	C26	H26	20.8	23.7
C23	N4	C26	H26A	140.8	143.7
C10	C11	C23	N4	359.9	360.0
C11	C23	N4	C18	180.2	180.1
N4	C23	C11	H11	179.9	180.0
C21	C18	C23	N4	299.0	238.3
N3	C24	C26	N4	198.2	305.0
C22	N4	C26	C23	179.3	180.3
C26	N4	C22	C10	180.5	179.8
C26	N4	C22	C17	0.7	359.7
C26	N4	C23	C11	179.5	180.3
C26	N4	C23	C18	359.3	0.2
C12	C24	C26	N4	18.4	125.0
C24	C26	N4	H26	240.0	240.0
C24	C26	N4	H26A	120.0	119.9
H26	C26	N4	H26A	240.0	240.0
O1	C19	C7	C5	180.1	180.0
C7	C5	C17	C6	0.2	0.0
C7	C5	C17	C22	179.6	180.0
C17	C5	C7	H5	180.0	180.2
C5	C7	C19	C8	0.1	0.0
C19	C7	C5	H7	180.0	180.0
N4	C22	C17	C5	316.6	215.8
C17	C5	C7	C19	359.9	360.0
C7	C5	C17	H5	180.0	179.8
C17	C5	C7	H7	179.8	180.0
C8	C6	C17	C5	359.8	0.0
C6	C17	C5	C22	180.6	180.0
C5	C17	C6	H6	179.8	180.0
C10	C22	C17	C5	136.8	35.7
C3	C13	C25	N5	180.0	179.9
N3	C25	N5	C13	180.2	180.0
N5	C25	C13	H13	360.0	360.0
HN5	N5	C25	HN5A	240.0	180.1
O1	C19	C8	C6	179.9	180.0
C5	C17	C6	C8	359.8	0.0
C8	C6	C17	C22	180.4	180.0
C17	C6	C8	H6	180.0	180.0
C7	C19	C8	C6	359.9	360.0
C19	C8	C6	H8	180.0	180.1
N4	C22	C17	C6	136.0	35.8
C5	C17	C6	C22	179.4	180.0
C6	C17	C5	H5	180.2	180.2
C17	C6	C8	C19	0.1	0.0
C8	C6	C17	H6	180.0	180.0
C17	C6	C8	H8	180.1	179.9
C10	C22	C17	C6	316.2	215.7
C7	C19	O1	C20	344.9	251.9
O1	C19	C7	C8	180.0	179.9
C19	C7	C5	C17	359.9	360.0
C19	C7	C5	H5	179.9	179.8
C5	C7	C19	H7	180.0	180.0
C6	C8	C19	C7	359.9	360.0
C7	C19	C8	H8	179.9	180.0
C8	C19	O1	C20	165.0	71.9
O1	C19	C8	C7	180.0	180.1
C19	C8	C6	C17	0.1	0.0
C19	C8	C6	H6	180.2	180.0
C6	C8	C19	H8	180.0	179.9
C8	C19	C7	H7	180.1	180.0
CL1	C21	C9	C18	180.1	180.1
C21	C9	C2	H2	180.1	180.0
C2	C9	C21	H9	180.0	179.9
C4	C18	C21	C9	0.2	0.1
C9	C21	C18	C23	180.0	180.1
N4	C22	C10	C11	0.0	359.9
N4	C23	C11	C10	359.9	360.0
C11	C10	C22	C17	179.8	180.0
C22	C10	C11	H10	180.0	180.0
C10	C11	C23	C18	180.1	180.0
C23	C11	C10	H11	180.0	180.1
C10	C22	N4	C23	359.9	0.0
C10	C22	N4	C26	180.5	179.8
N4	C22	C10	C17	180.2	179.9
C5	C17	C22	C10	136.8	35.7
C6	C17	C22	C10	316.2	215.7
C22	C10	C11	C23	0.0	0.1
C11	C10	C22	H10	180.0	180.0
C22	C10	C11	H11	180.0	180.0
C4	C18	C23	C11	298.6	238.1
C11	C23	N4	C26	179.5	180.3
N4	C23	C11	C18	179.8	179.9
C23	C11	C10	C22	0.0	0.1
C23	C11	C10	H10	180.0	180.0
C10	C11	C23	H11	180.0	179.9
C21	C18	C23	C11	118.8	58.2
C24	C12	C3	C13	359.8	360.0
C24	C12	C3	H3	179.8	179.8
C3	C12	C24	H12	180.0	179.9
C12	C24	N3	C25	359.7	0.1
N3	C24	C12	C26	180.2	179.9
N4	C26	C24	C12	18.4	125.0
C12	C24	C26	H26	258.4	4.9
C12	C24	C26	H26A	138.4	244.9
C25	C13	C3	H3	180.2	180.3
C3	C13	C25	H13	180.0	180.0
N3	C25	C13	N5	179.8	180.0
C13	C25	N5	HN5	179.8	180.1
C13	C25	N5	HN5A	299.8	360.0
C20	C14	N1	C16	0.2	360.0
N1	C14	C20	H14	180.0	180.1
O1	C20	C14	C15	179.4	179.9
N2	C15	C20	C14	0.2	360.0
C14	C20	C15	H15	180.2	180.0
O1	C20	C15	C14	180.6	180.1
C20	C15	N2	C16	359.7	360.0
N2	C15	C20	H15	180.0	180.0
C15	C20	C14	H14	179.8	180.0
C17	C22	N4	C23	180.1	179.9
C17	C22	N4	C26	0.7	359.7
N4	C22	C17	C10	179.8	180.1
C5	C17	C22	C6	180.6	180.0
C22	C17	C5	H5	359.6	0.2
C22	C17	C6	H6	0.4	360.0
C17	C22	C10	H10	359.9	0.1
CL1	C21	C18	C9	179.9	179.9
C4	C18	C21	C23	180.2	180.1
C21	C18	C4	H4	179.9	180.0
N4	C23	C18	C21	299.0	238.3
C18	C21	C9	H9	179.9	180.0
C11	C23	C18	C21	118.8	58.2
C4	C18	C23	C21	179.8	179.9
C23	C18	C4	H4	0.1	0.1
C18	C23	N4	C26	359.3	0.2
N4	C23	C18	C11	180.2	180.1
C18	C23	C11	H11	0.1	0.1
C26	C24	N3	C25	179.9	180.0
N3	C24	C26	C12	179.8	180.1
N4	C26	C24	H26	120.0	120.1
N4	C26	C24	H26A	240.0	240.1
C26	C24	C12	H12	0.0	0.1
H26	C26	C24	H26A	120.0	120.0
C2	C1	H1	C4	180.0	180.2
H1	C1	C2	C9	179.9	179.7
H1	C1	C2	H2	359.9	359.8
H1	C1	C4	C18	180.1	180.3
H1	C1	C4	H4	0.1	0.2
H2	C2	C1	C4	179.9	180.0
C1	C2	H2	C9	180.0	180.0
H2	C2	C1	H1	359.9	359.8
H2	C2	C9	C21	180.1	180.0
H2	C2	C9	H9	0.1	359.9
C12	C3	H3	C13	180.0	180.2
H3	C3	C12	C24	179.8	179.8
H3	C3	C12	H12	359.8	359.7
H3	C3	C13	C25	180.2	180.3
H3	C3	C13	H13	0.3	0.2
C1	C4	H4	C18	180.0	180.1
H4	C4	C1	H1	0.1	0.2
H4	C4	C18	C21	179.9	180.0
H4	C4	C18	C23	0.1	0.1
C7	C5	H5	C17	180.0	180.2
H5	C5	C7	C19	179.9	179.8
H5	C5	C7	H7	359.9	359.8
H5	C5	C17	C6	180.2	180.2
H5	C5	C17	C22	359.6	0.2
HN5	N5	C25	C13	179.8	180.1
C25	N5	HN5	HN5A	120.0	179.9
HN5A	N5	C25	C13	299.8	360.0
C25	N5	HN5A	HN5	240.0	180.1
C8	C6	H6	C17	180.0	180.0
H6	C6	C8	C19	180.2	180.0
H6	C6	C8	H8	0.1	359.9
H6	C6	C17	C22	0.4	360.0
H7	C7	C5	C17	179.8	180.0
C5	C7	H7	C19	180.0	180.0
H7	C7	C5	H5	359.9	359.8
H7	C7	C19	C8	180.1	180.0
H8	C8	C6	C17	180.1	179.9
C6	C8	H8	C19	180.0	180.1
H8	C8	C6	H6	0.1	359.9
C2	C9	H9	C21	180.0	180.1
H9	C9	C2	H2	0.1	359.9
H9	C9	C21	C18	179.9	180.0
C11	C10	H10	C22	180.0	180.1
H10	C10	C11	C23	180.0	180.0
H10	C10	C11	H11	0.0	360.0
H10	C10	C22	C17	359.9	0.1
H11	C11	C10	C22	180.0	180.0
C10	C11	H11	C23	180.0	180.1
H11	C11	C10	H10	0.0	360.0
H11	C11	C23	C18	0.1	0.1
H12	C12	C3	C13	179.8	179.9
C3	C12	H12	C24	180.0	180.1
H12	C12	C3	H3	359.8	359.7
H12	C12	C24	C26	0.0	0.1
C3	C13	H13	C25	180.0	180.0
H13	C13	C3	H3	0.3	0.2
H14	C14	N1	C16	180.2	180.0
N1	C14	H14	C20	180.0	179.9
H14	C14	C20	C15	179.8	180.0
H15	C15	N2	C16	179.7	180.0
N2	C15	H15	C20	180.0	180.0
N1	C16	H16	N2	180.0	180.0
N4	C26	H26	C24	240.7	240.0
N4	C26	H26	H26A	120.4	120.0
C24	C26	H26	H26A	239.7	240.0
N4	C26	H26A	C24	119.3	120.0
N4	C26	H26A	H26	239.6	240.0
C24	C26	H26A	H26	120.3	120.0