PDB Chemical Component 872

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 872

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.442 1.394
C1 C6 1.430 1.396
C1 H1 1.080 1.086
C2 F10 1.334 1.341
C2 C3 1.463 1.386
C3 C11 1.483 1.509
C3 C4 1.415 1.385
C4 C5 1.406 1.395
C4 H4 1.080 1.087
C5 C6 1.414 1.395
C5 F9 1.302 1.339
C6 F41 1.304 1.339
C11 C12 1.592 1.545
C11 H111 1.100 1.098
C11 H112 1.100 1.100
C12 C15 1.515 1.528
C12 N20 1.243 1.469
C12 H12 1.100 1.096
C15 C16 1.582 1.510
C15 H151 1.100 1.093
C15 H152 1.100 1.091
C16 N19 1.424 1.402
C16 O22 1.239 1.233
N19 C25 1.515 1.468
N19 C30 1.516 1.475
N20 H201 1.000 0.993
N20 H202 1.000 0.993
C25 C26 1.530 1.530
C25 H251 1.100 1.094
C25 H252 1.100 1.096
C26 C27 1.541 1.527
C26 H261 1.100 1.097
C26 H262 1.101 1.096
C27 N28 1.464 1.457
C27 H271 1.100 1.095
C27 H272 1.100 1.095
N28 C29 1.310 1.382
N28 HN28 1.000 1.015
C29 C30 1.572 1.525
C29 O39 1.216 1.231
C30 C37 1.575 1.528
C30 H30 1.100 1.096
C37 C42 1.519 1.500
C37 H371 1.100 1.086
C37 H372 1.100 1.086
C42 F47 1.324 1.350
C42 F45 1.312 1.351
C42 F46 1.334 1.352

Bond Angles for 872

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 116.7 120.0
C2 C1 H1 121.6 120.0
C1 C2 F10 118.3 119.6
C1 C2 C3 121.8 119.4
C6 C1 H1 121.6 120.0
C1 C6 C5 121.3 120.0
C1 C6 F41 119.5 120.0
C3 C2 F10 119.9 121.1
C2 C3 C11 122.3 119.5
C2 C3 C4 118.5 121.3
C4 C3 C11 119.1 119.2
C3 C11 C12 115.6 114.6
C3 C11 H111 107.5 109.8
C3 C11 H112 106.1 106.9
C3 C4 C5 119.8 119.4
C3 C4 H4 120.1 121.2
C5 C4 H4 120.1 119.4
C4 C5 C6 121.9 120.0
C4 C5 F9 118.1 120.0
C6 C5 F9 120.0 120.0
C5 C6 F41 119.3 120.0
C12 C11 H111 107.5 109.9
C12 C11 H112 106.0 109.8
C11 C12 C15 104.0 113.4
C11 C12 N20 104.3 108.4
C11 C12 H12 115.8 109.9
H111 C11 H112 114.4 105.4
C15 C12 N20 108.5 107.2
C15 C12 H12 112.0 110.0
C12 C15 C16 115.9 111.7
C12 C15 H151 107.4 111.2
C12 C15 H152 105.9 112.4
N20 C12 H12 111.7 107.6
C12 N20 H201 109.5 117.7
C12 N20 H202 109.5 117.6
C16 C15 H151 107.4 104.9
C16 C15 H152 105.9 108.0
C15 C16 N19 118.5 116.6
C15 C16 O22 119.0 118.7
H151 C15 H152 114.7 108.2
N19 C16 O22 122.5 124.7
C16 N19 C25 120.3 123.1
C16 N19 C30 113.7 120.9
C25 N19 C30 126.0 115.1
N19 C25 C26 111.1 111.3
N19 C25 H251 108.9 109.9
N19 C25 H252 108.6 108.8
N19 C30 C29 113.7 107.2
N19 C30 C37 136.5 114.4
N19 C30 H30 60.6 108.5
H201 N20 H202 109.4 123.2
C26 C25 H251 108.9 108.9
C26 C25 H252 108.6 111.2
C25 C26 C27 111.3 113.0
C25 C26 H261 108.9 109.9
C25 C26 H262 108.5 108.1
H251 C25 H252 110.8 106.7
C27 C26 H261 108.8 109.7
C27 C26 H262 108.5 108.7
C26 C27 N28 114.9 113.5
C26 C27 H271 107.7 111.3
C26 C27 H272 106.5 109.2
H261 C26 H262 110.9 107.3
N28 C27 H271 107.7 108.7
N28 C27 H272 106.5 106.2
C27 N28 C29 151.8 127.0
C27 N28 HN28 104.0 116.5
H271 C27 H272 113.8 107.7
C29 N28 HN28 104.1 116.3
N28 C29 C30 104.3 116.3
N28 C29 O39 135.0 121.8
C30 C29 O39 120.7 121.9
C29 C30 C37 109.8 113.6
C29 C30 H30 174.1 107.8
C37 C30 H30 75.9 105.1
C30 C37 C42 117.3 111.2
C30 C37 H371 107.0 107.6
C30 C37 H372 105.1 107.6
C42 C37 H371 106.9 110.8
C42 C37 H372 105.1 110.9
C37 C42 F47 111.9 112.0
C37 C42 F45 107.7 112.0
C37 C42 F46 111.6 109.4
H371 C37 H372 115.8 108.7
F45 C42 F47 109.3 108.1
F46 C42 F47 108.5 107.6
F45 C42 F46 107.8 107.6

Torsion Angles for 872

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 H1 180.0 180.0
C2 C1 C6 C5 359.8 0.0
C2 C1 C6 F41 180.0 180.0
C3 C2 C1 F10 180.4 180.0
C1 C2 C3 C11 179.4 180.0
C1 C2 C3 C4 359.5 360.0
C2 C1 C6 H1 180.0 180.0
C6 C1 C2 F10 179.9 180.0
C6 C1 C2 C3 0.4 0.0
C4 C5 C6 C1 0.1 360.0
C1 C6 C5 F9 180.0 180.0
C5 C6 C1 F41 179.8 180.0
C2 C1 H1 C6 180.0 180.0
H1 C1 C2 F10 359.9 360.0
H1 C1 C2 C3 180.4 180.0
H1 C1 C6 C5 179.8 180.0
H1 C1 C6 F41 0.1 360.0
F10 C2 C1 C6 179.9 180.0
F10 C2 C1 H1 359.9 360.0
C1 C2 F10 C3 180.4 180.0
F10 C2 C3 C11 359.8 0.0
F10 C2 C3 C4 179.9 180.0
C3 C2 C1 C6 0.4 0.0
C3 C2 C1 H1 180.4 180.0
C1 C2 C3 F10 179.6 180.0
C4 C3 C2 C11 180.1 180.0
C2 C3 C11 C12 253.3 120.0
C2 C3 C11 H111 133.3 355.8
C2 C3 C11 H112 10.5 241.9
C2 C3 C4 C5 0.4 0.0
C2 C3 C4 H4 180.4 180.0
C11 C3 C2 F10 359.8 0.0
C2 C3 C11 C4 180.1 180.0
C11 C3 C4 C5 180.5 180.0
C11 C3 C4 H4 0.5 360.0
C12 C11 C3 H111 120.0 124.2
C12 C11 C3 H112 242.8 238.1
C3 C11 C12 C15 169.3 296.3
C3 C11 C12 N20 55.6 177.4
C3 C11 C12 H12 292.5 60.0
H111 C11 C3 H112 122.8 113.8
C4 C3 C2 F10 179.9 180.0
C2 C3 C4 C11 179.9 180.0
C4 C3 C11 C12 73.2 300.0
C4 C3 C11 H111 313.2 175.8
C4 C3 C11 H112 190.4 62.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 359.7 0.0
C3 C4 C5 F9 179.8 180.0
C1 C6 C5 C4 0.1 360.0
C5 C4 C3 C11 180.5 180.0
C3 C4 C5 H4 180.0 180.0
C6 C5 C4 F9 179.9 180.1
C4 C5 C6 F41 179.9 180.0
H4 C4 C3 C11 0.5 360.0
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 179.8 180.0
H4 C4 C5 F9 359.9 360.0
C5 C6 C1 H1 179.8 180.0
C1 C6 C5 F41 180.2 180.0
C6 C5 C4 H4 179.8 180.0
C4 C5 C6 F9 180.1 179.9
F9 C5 C4 H4 359.9 360.0
C4 C5 F9 C6 179.9 180.1
F9 C5 C6 F41 359.8 0.1
F41 C6 C1 H1 0.1 360.0
C1 C6 F41 C5 179.8 180.0
F41 C6 C5 F9 359.8 0.1
C3 C11 C12 H111 240.0 235.8
C3 C11 C12 H112 117.2 120.3
H111 C11 C12 H112 237.2 244.6
C15 C12 C11 N20 113.7 118.9
C15 C12 C11 H12 236.8 236.3
C11 C12 C15 C16 70.8 183.6
C11 C12 C15 H151 310.8 300.5
C11 C12 C15 H152 187.9 62.1
N20 C12 C11 H12 123.1 117.4
C11 C12 N20 H201 128.2 227.3
C11 C12 N20 H202 248.1 60.8
C3 C11 H111 C12 125.0 127.0
C3 C11 H111 H112 242.5 245.2
C12 C11 H111 H112 117.4 118.2
H111 C11 C12 C15 289.3 60.5
H111 C11 C12 N20 175.6 301.6
H111 C11 C12 H12 52.5 184.2
C3 C11 H112 C12 236.6 235.1
C3 C11 H112 H111 118.3 116.8
C12 C11 H112 H111 241.7 241.7
H112 C11 C12 C15 52.0 176.0
H112 C11 C12 N20 298.4 57.1
H112 C11 C12 H12 175.3 299.6
C15 C12 C11 H111 289.3 60.5
C15 C12 C11 H112 52.0 176.0
C11 C12 C15 N20 249.4 240.4
C11 C12 C15 H12 125.7 123.6
N20 C12 C15 H12 236.3 243.2
C15 C12 N20 H201 17.8 104.5
C15 C12 N20 H202 137.8 298.0
C16 C15 C12 H151 120.0 243.1
C16 C15 C12 H152 242.9 121.6
C12 C15 C16 N19 181.7 150.6
C12 C15 C16 O22 1.4 330.5
H151 C15 C12 H152 123.0 238.4
N20 C12 C11 H111 175.6 301.6
N20 C12 C11 H112 298.4 57.1
C11 C12 N20 C15 110.4 122.8
C11 C12 N20 H12 234.3 241.1
C15 C12 N20 H12 123.9 118.3
N20 C12 C15 C16 181.4 303.2
N20 C12 C15 H151 61.4 60.1
N20 C12 C15 H152 298.5 181.7
H201 N20 C12 H202 240.0 166.5
H12 C12 C11 H111 52.5 184.2
H12 C12 C11 H112 175.3 299.6
C11 C12 H12 C15 241.1 234.4
C11 C12 H12 N20 119.1 117.9
C15 C12 H12 N20 238.1 243.5
H12 C12 C15 C16 305.1 60.0
H12 C12 C15 H151 185.1 176.9
H12 C12 C15 H152 62.2 298.5
H12 C12 N20 H201 253.9 346.2
H12 C12 N20 H202 13.8 179.6
C16 C15 C12 N20 181.4 303.2
C16 C15 C12 H12 305.1 60.0
C12 C15 C16 H151 240.0 120.6
C12 C15 C16 H152 117.1 235.9
H151 C15 C16 H152 237.0 115.3
N19 C16 C15 O22 180.3 180.1
C15 C16 N19 C25 323.9 29.8
C15 C16 N19 C30 144.7 198.8
H151 C15 C12 N20 61.4 60.1
H151 C15 C12 H12 185.1 176.9
C12 C15 H151 C16 125.3 239.1
C12 C15 H151 H152 242.6 124.0
C16 C15 H151 H152 117.4 244.9
H151 C15 C16 N19 301.7 30.0
H151 C15 C16 O22 121.4 209.9
H152 C15 C12 N20 298.5 181.7
H152 C15 C12 H12 62.2 298.5
C12 C15 H152 C16 236.4 123.6
C12 C15 H152 H151 118.2 236.7
C16 C15 H152 H151 241.8 113.1
H152 C15 C16 N19 64.7 274.7
H152 C15 C16 O22 244.4 94.6
N19 C16 C15 H151 301.7 30.0
N19 C16 C15 H152 64.7 274.7
C15 C16 N19 O22 179.7 179.9
C25 N19 C16 C30 179.2 191.1
C16 N19 C25 C26 273.6 93.4
C16 N19 C25 H251 153.6 332.7
C16 N19 C25 H252 32.9 216.2
C16 N19 C30 C29 115.9 283.4
C16 N19 C30 C37 295.3 50.3
C16 N19 C30 H30 297.7 167.3
O22 C16 C15 H151 121.4 209.9
O22 C16 C15 H152 244.4 94.6
C15 C16 O22 N19 180.3 180.1
O22 C16 N19 C25 144.3 209.9
O22 C16 N19 C30 325.0 18.9
C25 N19 C16 O22 144.3 209.9
C16 N19 C25 C30 180.9 169.5
C25 N19 C30 C29 296.7 93.2
C25 N19 C30 C37 116.1 220.1
C25 N19 C30 H30 118.5 337.1
C26 C25 N19 H251 120.0 120.7
C26 C25 N19 H252 240.7 237.2
N19 C25 C26 C27 302.8 61.5
N19 C25 C26 H261 62.8 298.6
N19 C25 C26 H262 183.6 181.8
H251 C25 N19 H252 120.7 116.4
C30 N19 C16 O22 325.0 18.9
C16 N19 C30 C25 179.2 190.2
C30 N19 C25 C26 92.8 283.8
C30 N19 C25 H251 332.8 163.1
C30 N19 C25 H252 212.1 46.7
N28 C29 C30 N19 360.0 297.8
N19 C30 C29 O39 179.7 119.2
C29 C30 N19 C37 180.6 233.1
C29 C30 N19 H30 178.2 116.1
C37 C30 N19 H30 357.6 243.0
N19 C30 C37 C42 64.6 58.0
N19 C30 C37 H371 184.6 296.5
N19 C30 C37 H372 308.3 179.5
H201 N20 C12 H12 253.9 346.2
C12 N20 H201 H202 120.0 194.3
H202 N20 C12 H12 13.8 179.6
C12 N20 H202 H201 240.0 165.7
C26 C25 N19 C30 92.8 283.8
N19 C25 C26 H251 240.0 238.7
N19 C25 C26 H252 119.3 121.5
H251 C25 C26 H252 239.3 242.7
C27 C26 C25 H261 240.0 122.9
C27 C26 C25 H262 119.2 239.7
C25 C26 C27 N28 36.2 286.5
C25 C26 C27 H271 156.2 49.4
C25 C26 C27 H272 278.6 168.2
H261 C26 C25 H262 239.2 116.8
H251 C25 N19 C30 332.8 163.1
N19 C25 H251 C26 121.3 122.2
N19 C25 H251 H252 240.7 242.2
C26 C25 H251 H252 119.3 120.1
H251 C25 C26 C27 62.8 182.7
H251 C25 C26 H261 182.8 59.9
H251 C25 C26 H262 303.6 303.1
H252 C25 N19 C30 212.1 46.7
N19 C25 H252 C26 239.1 237.1
N19 C25 H252 H251 119.6 118.5
C26 C25 H252 H251 240.4 241.4
H252 C25 C26 C27 183.5 300.0
H252 C25 C26 H261 303.5 177.1
H252 C25 C26 H262 64.3 60.3
C27 C26 C25 H251 62.8 182.7
C27 C26 C25 H252 183.5 300.0
C25 C26 C27 H261 120.0 237.0
C25 C26 C27 H262 240.8 120.0
H261 C26 C27 H262 120.8 243.0
N28 C27 C26 H271 240.0 237.1
N28 C27 C26 H272 117.6 118.3
C26 C27 N28 C29 281.5 67.3
C26 C27 N28 HN28 101.5 241.6
H271 C27 C26 H272 237.5 241.2
H261 C26 C25 H251 182.8 59.9
H261 C26 C25 H252 303.5 177.1
C25 C26 H261 C27 238.5 124.8
C25 C26 H261 H262 119.3 242.7
C27 C26 H261 H262 240.8 117.9
H261 C26 C27 N28 276.2 49.5
H261 C26 C27 H271 36.2 172.4
H261 C26 C27 H272 158.6 291.2
H262 C26 C25 H251 303.6 303.1
H262 C26 C25 H252 64.3 60.3
C25 C26 H262 C27 121.0 237.0
C25 C26 H262 H261 240.5 118.4
C27 C26 H262 H261 119.5 241.4
H262 C26 C27 N28 155.4 166.5
H262 C26 C27 H271 275.4 289.4
H262 C26 C27 H272 37.9 48.2
N28 C27 C26 H261 276.2 49.5
N28 C27 C26 H262 155.4 166.5
C26 C27 N28 H271 120.0 124.3
C26 C27 N28 H272 242.4 240.0
H271 C27 N28 H272 122.5 115.6
C29 N28 C27 HN28 180.0 185.7
C27 N28 C29 C30 74.0 354.1
C27 N28 C29 O39 254.4 172.7
H271 C27 C26 H261 36.2 172.4
H271 C27 C26 H262 275.4 289.4
C26 C27 H271 N28 235.6 234.4
C26 C27 H271 H272 117.8 119.7
N28 C27 H271 H272 242.2 245.3
H271 C27 N28 C29 161.5 302.9
H271 C27 N28 HN28 341.5 117.3
H272 C27 C26 H261 158.6 291.2
H272 C27 C26 H262 37.9 48.2
C26 C27 H272 N28 123.0 122.8
C26 C27 H272 H271 241.5 239.1
N28 C27 H272 H271 118.5 116.3
H272 C27 N28 C29 39.0 187.3
H272 C27 N28 HN28 219.0 1.6
N19 C30 C29 N28 360.0 297.8
C29 N28 C27 H271 161.5 302.9
C29 N28 C27 H272 39.0 187.3
C27 N28 C29 HN28 180.0 174.3
C30 C29 N28 O39 179.6 181.4
N28 C29 C30 C37 180.4 170.4
N28 C29 C30 H30 15.4 54.4
HN28 N28 C27 H271 341.5 117.3
HN28 N28 C27 H272 219.0 1.6
C27 N28 HN28 C29 180.0 185.1
HN28 N28 C29 C30 254.0 179.8
HN28 N28 C29 O39 74.4 358.4
N19 C30 C29 C37 179.6 127.4
N19 C30 C29 H30 344.5 243.4
C30 C29 N28 HN28 254.0 179.8
N28 C29 C30 O39 180.3 178.6
C37 C30 C29 H30 165.0 116.0
C29 C30 C37 C42 244.0 181.5
C29 C30 C37 H371 4.0 60.0
C29 C30 C37 H372 127.7 303.1
O39 C29 N28 HN28 74.4 358.4
N28 C29 O39 C30 179.6 181.5
O39 C29 C30 C37 0.1 351.8
O39 C29 C30 H30 195.1 235.8
N19 C30 C37 C29 180.6 236.5
N19 C30 C37 H30 2.1 118.9
C37 C30 C29 O39 0.1 351.8
C29 C30 C37 H30 181.6 242.5
C42 C37 C30 H371 240.0 121.5
C42 C37 C30 H372 116.3 238.4
C30 C37 C42 F47 290.4 62.1
C30 C37 C42 F45 170.2 300.4
C30 C37 C42 F46 52.2 181.2
H371 C37 C30 H372 236.3 116.9
N19 C30 H30 C29 16.3 115.8
N19 C30 H30 C37 181.7 237.2
H30 C30 C29 O39 195.1 235.8
C29 C30 H30 C37 165.4 121.4
H30 C30 C37 C42 62.5 299.1
H30 C30 C37 H371 182.5 177.6
H30 C30 C37 H372 306.1 60.6
C42 C37 C30 H30 62.5 299.1
C30 C37 C42 H371 120.0 240.4
C30 C37 C42 H372 243.7 119.6
H371 C37 C42 H372 123.6 239.2
F45 C42 C37 F47 239.9 238.3
F46 C42 C37 F47 121.8 119.2
F45 C42 C37 F46 118.1 119.2
H371 C37 C30 H30 182.5 177.6
C30 C37 H371 C42 233.5 121.8
C30 C37 H371 H372 116.8 243.8
C42 C37 H371 H372 243.2 122.1
H371 C37 C42 F47 170.3 181.7
H371 C37 C42 F45 50.2 60.0
H371 C37 C42 F46 292.1 300.8
H372 C37 C30 H30 306.1 60.6
C30 C37 H372 C42 124.4 238.2
C30 C37 H372 H371 242.2 116.2
C42 C37 H372 H371 117.8 237.9
H372 C37 C42 F47 46.7 302.4
H372 C37 C42 F45 286.6 180.8
H372 C37 C42 F46 168.5 61.6
F47 C42 C37 H371 170.3 181.7
F47 C42 C37 H372 46.7 302.4
C37 C42 F47 F45 240.8 236.1
C37 C42 F47 F46 123.5 120.2
F45 C42 F47 F46 242.7 244.1
F45 C42 C37 H371 50.2 60.0
F45 C42 C37 H372 286.6 180.8
C37 C42 F45 F47 121.7 123.9
C37 C42 F45 F46 239.5 239.8
F46 C42 F45 F47 242.2 244.1
F46 C42 C37 H371 292.1 300.8
F46 C42 C37 H372 168.5 61.6
C37 C42 F46 F47 236.3 238.1
C37 C42 F46 F45 118.0 121.9
F45 C42 F46 F47 118.3 116.2