PDB Chemical Component 86M
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 86M
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C10 |
C11 |
1.340 |
1.350 |
C10 |
C9 |
1.454 |
1.405 |
C11 |
N1 |
1.388 |
1.364 |
C9 |
C8 |
1.357 |
1.360 |
C15 |
N3 |
1.347 |
1.317 |
C15 |
C6 |
1.395 |
1.387 |
N3 |
C2 |
1.345 |
1.323 |
N1 |
C14 |
1.392 |
1.371 |
N1 |
C12 |
1.371 |
1.369 |
O2 |
C6 |
1.386 |
1.357 |
O2 |
C7 |
1.429 |
1.429 |
C8 |
C14 |
1.445 |
1.410 |
C8 |
C7 |
1.523 |
1.506 |
C6 |
C4 |
1.425 |
1.407 |
C14 |
N2 |
1.319 |
1.326 |
C12 |
C13 |
1.374 |
1.351 |
C2 |
O1 |
1.396 |
1.357 |
C2 |
C3 |
1.398 |
1.385 |
O1 |
C1 |
1.425 |
1.429 |
C4 |
C3 |
1.415 |
1.402 |
C4 |
C5 |
1.521 |
1.471 |
N2 |
C13 |
1.371 |
1.335 |
C10 |
C10A |
1.080 |
1.080 |
C11 |
C11A |
1.080 |
1.080 |
C12 |
C12A |
1.080 |
1.080 |
C13 |
C13A |
1.080 |
1.080 |
C15 |
C15A |
1.080 |
1.080 |
C1 |
HC1A |
1.100 |
1.089 |
C1 |
HC1C |
1.100 |
1.091 |
C1 |
HC1B |
1.100 |
1.090 |
C3 |
HC3A |
1.080 |
1.080 |
C5 |
HC5B |
1.079 |
1.080 |
C7 |
HC7B |
1.100 |
1.090 |
C7 |
HC7A |
1.100 |
1.090 |
C9 |
HC9A |
1.080 |
1.079 |
C5 |
O3 |
2.130 |
1.213 |
Bond Angles for 86M
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
C10 |
C9 |
119.3 |
120.3 |
C10 |
C11 |
N1 |
118.8 |
120.6 |
C11 |
C10 |
C10A |
120.4 |
119.9 |
C10 |
C11 |
C11A |
120.6 |
119.7 |
C10 |
C9 |
C8 |
123.0 |
119.7 |
C9 |
C10 |
C10A |
120.4 |
119.8 |
C10 |
C9 |
HC9A |
118.5 |
120.1 |
C11 |
N1 |
C14 |
123.7 |
120.4 |
C11 |
N1 |
C12 |
129.2 |
132.6 |
N1 |
C11 |
C11A |
120.6 |
119.7 |
C6 |
C15 |
N3 |
125.6 |
120.9 |
C15 |
N3 |
C2 |
117.6 |
122.2 |
N3 |
C15 |
C15A |
117.2 |
119.6 |
C15 |
C6 |
C4 |
116.3 |
118.9 |
C6 |
C15 |
C15A |
117.2 |
119.5 |
N1 |
C14 |
N2 |
110.9 |
108.0 |
N1 |
C12 |
C12A |
127.4 |
126.3 |
O2 |
C7 |
HC7B |
108.9 |
109.5 |
O2 |
C7 |
HC7A |
108.9 |
109.5 |
C8 |
C14 |
N2 |
130.8 |
132.3 |
C8 |
C7 |
HC7B |
108.9 |
109.4 |
C8 |
C7 |
HC7A |
108.9 |
109.5 |
C13 |
C12 |
C12A |
127.3 |
126.5 |
C12 |
C13 |
C13A |
124.4 |
125.7 |
C2 |
C3 |
HC3A |
120.2 |
120.5 |
O1 |
C1 |
HC1A |
109.5 |
109.5 |
O1 |
C1 |
HC1C |
109.5 |
109.5 |
O1 |
C1 |
HC1B |
109.5 |
109.5 |
C4 |
C3 |
HC3A |
120.3 |
120.5 |
C4 |
C5 |
HC5B |
97.8 |
120.0 |
C4 |
C5 |
O3 |
164.5 |
120.0 |
N2 |
C13 |
C13A |
124.3 |
125.7 |
HC1A |
C1 |
HC1C |
109.4 |
109.4 |
HC1A |
C1 |
HC1B |
109.5 |
109.5 |
HC1C |
C1 |
HC1B |
109.4 |
109.5 |
HC5B |
C5 |
O3 |
97.8 |
120.0 |
HC7B |
C7 |
HC7A |
109.5 |
109.4 |
Torsion Angles for 86M
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
C10 |
C9 |
C8 |
359.9 |
0.1 |
C9 |
C10 |
C11 |
C10A |
180.0 |
180.2 |
C11 |
C10 |
C9 |
HC9A |
179.9 |
180.0 |
C10 |
C11 |
N1 |
C14 |
359.9 |
0.0 |
C10 |
C11 |
N1 |
C12 |
180.0 |
180.0 |
N1 |
C11 |
C10 |
C11A |
180.0 |
180.0 |
C9 |
C10 |
C11 |
N1 |
0.1 |
360.0 |
C11 |
C10 |
C9 |
C10A |
180.0 |
179.8 |
C9 |
C10 |
C11 |
C11A |
180.1 |
180.0 |
N1 |
C11 |
C10 |
C9 |
0.1 |
360.0 |
N1 |
C11 |
C10 |
C10A |
180.1 |
179.8 |
C10 |
C11 |
N1 |
C11A |
180.0 |
180.0 |
C11 |
N1 |
C14 |
N2 |
180.0 |
180.0 |
C11 |
N1 |
C12 |
C12A |
360.0 |
0.1 |
C8 |
C9 |
C10 |
C10A |
179.9 |
180.3 |
C10 |
C9 |
C8 |
HC9A |
180.0 |
179.9 |
C9 |
C8 |
C14 |
N2 |
180.0 |
180.1 |
C9 |
C8 |
C7 |
HC7B |
239.6 |
239.9 |
C9 |
C8 |
C7 |
HC7A |
120.3 |
119.9 |
N3 |
C15 |
C6 |
C4 |
359.9 |
360.0 |
C6 |
C15 |
N3 |
C15A |
180.0 |
179.8 |
C6 |
C15 |
N3 |
C2 |
0.0 |
360.0 |
N3 |
C15 |
C6 |
C15A |
180.0 |
180.2 |
C2 |
N3 |
C15 |
C15A |
180.0 |
180.2 |
N3 |
C2 |
C3 |
HC3A |
180.5 |
179.9 |
C11 |
N1 |
C14 |
C12 |
180.0 |
180.0 |
C14 |
N1 |
C11 |
C11A |
179.9 |
180.0 |
C14 |
N1 |
C12 |
C12A |
180.0 |
180.0 |
C8 |
C14 |
N1 |
N2 |
180.0 |
180.0 |
C11 |
N1 |
C12 |
C14 |
180.0 |
180.0 |
C12 |
N1 |
C11 |
C11A |
360.0 |
359.9 |
C13 |
C12 |
N1 |
C12A |
180.0 |
180.0 |
N1 |
C12 |
C13 |
C13A |
180.0 |
180.0 |
O2 |
C6 |
C15 |
N3 |
180.0 |
180.0 |
O2 |
C6 |
C15 |
C15A |
0.0 |
359.8 |
C8 |
C7 |
O2 |
HC7B |
239.6 |
240.0 |
C8 |
C7 |
O2 |
HC7A |
120.3 |
120.1 |
HC7B |
C7 |
O2 |
HC7A |
240.7 |
240.1 |
C10 |
C9 |
C8 |
C14 |
0.0 |
359.9 |
C11 |
N1 |
C14 |
C8 |
360.0 |
360.0 |
N1 |
C14 |
C8 |
N2 |
180.0 |
180.0 |
C10 |
C9 |
C8 |
C7 |
180.1 |
180.0 |
O2 |
C7 |
C8 |
HC7B |
120.3 |
120.0 |
O2 |
C7 |
C8 |
HC7A |
239.6 |
240.0 |
C7 |
C8 |
C14 |
N2 |
360.0 |
360.0 |
HC7B |
C7 |
C8 |
HC7A |
119.3 |
119.9 |
C4 |
C6 |
C15 |
N3 |
359.9 |
360.0 |
C4 |
C6 |
C15 |
C15A |
179.9 |
179.8 |
C6 |
C4 |
C3 |
HC3A |
179.4 |
180.0 |
C6 |
C4 |
C5 |
HC5B |
62.4 |
180.0 |
C6 |
C4 |
C5 |
O3 |
242.4 |
0.0 |
C14 |
N2 |
C13 |
C13A |
180.0 |
180.0 |
C11 |
N1 |
C12 |
C13 |
180.0 |
180.1 |
N1 |
C12 |
C13 |
C12A |
180.0 |
180.0 |
N2 |
C13 |
C12 |
C13A |
180.0 |
180.0 |
C15 |
N3 |
C2 |
O1 |
180.0 |
180.0 |
C2 |
O1 |
C1 |
HC1A |
180.0 |
180.0 |
C2 |
O1 |
C1 |
HC1C |
300.0 |
300.0 |
C2 |
O1 |
C1 |
HC1B |
60.0 |
60.0 |
C15 |
N3 |
C2 |
C3 |
359.8 |
0.1 |
C4 |
C3 |
C2 |
HC3A |
180.0 |
180.0 |
HC1A |
C1 |
O1 |
HC1C |
240.0 |
240.0 |
HC1A |
C1 |
O1 |
HC1B |
120.0 |
120.0 |
HC1C |
C1 |
O1 |
HC1B |
240.0 |
240.0 |
C15 |
C6 |
C4 |
C3 |
0.4 |
0.0 |
C2 |
C3 |
C4 |
HC3A |
180.0 |
180.0 |
C15 |
C6 |
C4 |
C5 |
179.9 |
180.0 |
C5 |
C4 |
C3 |
HC3A |
359.8 |
0.0 |
HC5B |
C5 |
C4 |
O3 |
180.0 |
180.0 |
N2 |
C13 |
C12 |
C12A |
180.0 |
180.0 |
C12 |
C13 |
N2 |
C13A |
180.0 |
180.0 |
C11 |
C10 |
C10A |
C9 |
180.0 |
180.2 |
C10A |
C10 |
C11 |
N1 |
180.1 |
179.8 |
C10A |
C10 |
C11 |
C11A |
0.1 |
359.8 |
C10A |
C10 |
C9 |
C8 |
179.9 |
180.3 |
C10A |
C10 |
C9 |
HC9A |
359.9 |
0.2 |
C11A |
C11 |
C10 |
C9 |
180.1 |
180.0 |
C10 |
C11 |
C11A |
N1 |
180.0 |
180.0 |
C11A |
C11 |
C10 |
C10A |
0.1 |
359.8 |
C11A |
C11 |
N1 |
C14 |
179.9 |
180.0 |
C11A |
C11 |
N1 |
C12 |
360.0 |
359.9 |
C12A |
C12 |
C13 |
C13A |
360.0 |
360.0 |
C13A |
C13 |
C12 |
C12A |
360.0 |
360.0 |
C6 |
C15 |
C15A |
N3 |
180.0 |
180.2 |
C15A |
C15 |
N3 |
C2 |
180.0 |
180.2 |
C15A |
C15 |
C6 |
C4 |
179.9 |
179.8 |
O1 |
C1 |
HC1A |
HC1C |
120.0 |
120.0 |
O1 |
C1 |
HC1A |
HC1B |
240.0 |
240.0 |
HC1C |
C1 |
HC1A |
HC1B |
119.9 |
120.0 |
O1 |
C1 |
HC1C |
HC1A |
239.9 |
240.0 |
O1 |
C1 |
HC1C |
HC1B |
120.0 |
120.0 |
HC1A |
C1 |
HC1C |
HC1B |
240.1 |
240.0 |
O1 |
C1 |
HC1B |
HC1A |
120.1 |
120.1 |
O1 |
C1 |
HC1B |
HC1C |
240.0 |
240.0 |
HC1A |
C1 |
HC1B |
HC1C |
119.9 |
119.9 |
C4 |
C5 |
HC5B |
O3 |
180.0 |
180.0 |
O2 |
C7 |
HC7B |
HC7A |
118.9 |
120.0 |
C8 |
C7 |
HC7B |
HC7A |
241.1 |
240.0 |
O2 |
C7 |
HC7A |
HC7B |
241.1 |
240.0 |
C8 |
C7 |
HC7A |
HC7B |
118.9 |
120.0 |
C10 |
C9 |
HC9A |
C8 |
180.0 |
180.1 |
HC9A |
C9 |
C10 |
C10A |
359.9 |
0.2 |
C4 |
C5 |
O3 |
HC5B |
180.0 |
180.0 |