PDB Chemical Component 857
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 857
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C22 |
N5 |
1.484 |
1.465 |
O2 |
C20 |
1.229 |
1.215 |
N5 |
C20 |
1.328 |
1.348 |
C20 |
C11 |
1.447 |
1.482 |
C11 |
N3 |
1.385 |
1.328 |
C11 |
C12 |
1.419 |
1.391 |
N3 |
C9 |
1.377 |
1.316 |
C12 |
C13 |
1.417 |
1.392 |
C9 |
C8 |
1.417 |
1.383 |
C13 |
C8 |
1.454 |
1.392 |
C13 |
O1 |
1.399 |
1.357 |
O1 |
C18 |
1.374 |
1.360 |
C1 |
C18 |
1.462 |
1.390 |
C1 |
C17 |
1.449 |
1.381 |
C18 |
C14 |
1.462 |
1.383 |
C17 |
C16 |
1.458 |
1.385 |
C14 |
C15 |
1.434 |
1.395 |
C16 |
C15 |
1.447 |
1.403 |
C16 |
O4 |
1.334 |
1.354 |
C15 |
N4 |
1.352 |
1.362 |
O4 |
C19 |
1.394 |
1.345 |
N4 |
C19 |
1.368 |
1.309 |
C19 |
N2 |
1.451 |
1.378 |
N2 |
C25 |
1.364 |
1.398 |
C25 |
C24 |
1.469 |
1.389 |
C25 |
C6 |
1.425 |
1.389 |
C24 |
C21 |
1.418 |
1.382 |
C6 |
C7 |
1.431 |
1.386 |
C21 |
C10 |
1.426 |
1.383 |
C7 |
C10 |
1.435 |
1.389 |
C7 |
O3 |
1.404 |
1.359 |
C10 |
CL |
1.724 |
1.735 |
C23 |
O3 |
1.466 |
1.430 |
C23 |
C5 |
1.532 |
1.529 |
C5 |
N1 |
1.504 |
1.486 |
C5 |
C4 |
1.528 |
1.549 |
C26 |
N1 |
1.489 |
1.469 |
N1 |
C2 |
1.515 |
1.479 |
C4 |
C3 |
1.504 |
1.546 |
C2 |
C3 |
1.516 |
1.540 |
C21 |
H21 |
1.080 |
1.080 |
C24 |
H24 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.079 |
C12 |
H12 |
1.080 |
1.080 |
C8 |
H8 |
1.080 |
1.080 |
C9 |
H9 |
1.080 |
1.081 |
C14 |
H14 |
1.080 |
1.080 |
C17 |
H17 |
1.080 |
1.080 |
C1 |
H1 |
1.080 |
1.080 |
N2 |
HN2 |
1.000 |
0.969 |
N5 |
HN5 |
1.000 |
0.970 |
C22 |
H221 |
1.100 |
1.090 |
C22 |
H222 |
1.100 |
1.090 |
C22 |
H223 |
1.100 |
1.090 |
C23 |
H231 |
1.100 |
1.090 |
C23 |
H232 |
1.100 |
1.090 |
C2 |
H21A |
1.100 |
1.090 |
C2 |
H22 |
1.100 |
1.090 |
C3 |
H31 |
1.100 |
1.090 |
C3 |
H32 |
1.100 |
1.090 |
C4 |
H41 |
1.100 |
1.091 |
C4 |
H42 |
1.100 |
1.090 |
C5 |
H5 |
1.100 |
1.091 |
C26 |
H261 |
1.100 |
1.090 |
C26 |
H262 |
1.100 |
1.090 |
C26 |
H263 |
1.100 |
1.089 |
Bond Angles for 857
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C22 |
N5 |
HN5 |
124.1 |
120.0 |
N3 |
C11 |
C12 |
119.9 |
120.6 |
C11 |
N3 |
C9 |
126.9 |
121.8 |
C11 |
C12 |
C13 |
115.0 |
119.0 |
C11 |
C12 |
H12 |
122.5 |
120.5 |
N3 |
C9 |
C8 |
115.7 |
121.0 |
N3 |
C9 |
H9 |
122.1 |
119.5 |
C12 |
C13 |
C8 |
124.0 |
118.4 |
C12 |
C13 |
O1 |
109.8 |
120.8 |
C13 |
C12 |
H12 |
122.5 |
120.5 |
C9 |
C8 |
H8 |
120.7 |
120.3 |
C8 |
C13 |
O1 |
126.1 |
120.8 |
C13 |
C8 |
H8 |
120.8 |
120.4 |
C13 |
O1 |
C18 |
124.4 |
118.0 |
C18 |
C1 |
H1 |
121.1 |
119.8 |
C1 |
C17 |
H17 |
120.3 |
120.0 |
C18 |
C14 |
H14 |
122.0 |
120.2 |
C17 |
C16 |
O4 |
129.3 |
133.7 |
C14 |
C15 |
N4 |
129.6 |
133.6 |
C15 |
C14 |
H14 |
122.0 |
120.1 |
C16 |
C15 |
N4 |
108.3 |
106.6 |
C16 |
O4 |
C19 |
103.5 |
108.2 |
C15 |
N4 |
C19 |
104.2 |
108.7 |
C19 |
N2 |
HN2 |
115.3 |
120.0 |
C25 |
C24 |
H24 |
119.3 |
120.0 |
C25 |
C6 |
C7 |
116.5 |
119.9 |
C25 |
C6 |
H6 |
121.7 |
120.0 |
C24 |
C21 |
C10 |
114.5 |
120.1 |
C24 |
C21 |
H21 |
122.8 |
119.9 |
C6 |
C7 |
C10 |
119.5 |
120.0 |
C6 |
C7 |
O3 |
124.1 |
120.0 |
C7 |
C6 |
H6 |
121.8 |
120.1 |
C21 |
C10 |
C7 |
125.6 |
120.0 |
C21 |
C10 |
CL |
117.5 |
120.0 |
C10 |
C21 |
H21 |
122.8 |
119.9 |
C10 |
C7 |
O3 |
116.3 |
120.0 |
C7 |
C10 |
CL |
116.8 |
120.0 |
C23 |
C5 |
N1 |
110.8 |
110.7 |
C23 |
C5 |
C4 |
109.4 |
110.7 |
C5 |
C23 |
H231 |
109.1 |
109.5 |
C5 |
C23 |
H232 |
108.8 |
109.5 |
C23 |
C5 |
H5 |
106.5 |
110.6 |
C5 |
C4 |
H41 |
108.7 |
110.7 |
C5 |
C4 |
H42 |
108.3 |
110.8 |
N1 |
C2 |
C3 |
104.5 |
107.1 |
N1 |
C2 |
H21A |
111.2 |
109.9 |
N1 |
C2 |
H22 |
112.2 |
110.0 |
C4 |
C3 |
H31 |
110.0 |
110.3 |
C4 |
C3 |
H32 |
110.4 |
110.3 |
C3 |
C2 |
H21A |
111.1 |
109.9 |
C3 |
C2 |
H22 |
112.2 |
109.9 |
C2 |
C3 |
H31 |
110.0 |
110.3 |
C2 |
C3 |
H32 |
110.4 |
110.3 |
H221 |
C22 |
H222 |
109.5 |
109.4 |
H221 |
C22 |
H223 |
109.4 |
109.5 |
H222 |
C22 |
H223 |
109.5 |
109.5 |
H231 |
C23 |
H232 |
110.5 |
109.5 |
H21A |
C2 |
H22 |
105.7 |
110.1 |
H31 |
C3 |
H32 |
108.2 |
110.3 |
H41 |
C4 |
H42 |
111.2 |
110.6 |
H261 |
C26 |
H262 |
109.5 |
109.5 |
H261 |
C26 |
H263 |
109.4 |
109.5 |
H262 |
C26 |
H263 |
109.5 |
109.5 |
Torsion Angles for 857
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C20 |
C11 |
C12 |
H12 |
4.4 |
0.2 |
N3 |
C11 |
C12 |
C13 |
1.5 |
0.0 |
N3 |
C11 |
C12 |
H12 |
181.5 |
179.9 |
C11 |
N3 |
C9 |
C8 |
358.9 |
359.9 |
C11 |
N3 |
C9 |
H9 |
179.0 |
179.9 |
C12 |
C11 |
N3 |
C9 |
0.6 |
0.0 |
C11 |
C12 |
C13 |
C8 |
356.8 |
360.0 |
C11 |
C12 |
C13 |
O1 |
173.2 |
180.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
C9 |
N3 |
C11 |
C12 |
0.6 |
0.0 |
N3 |
C9 |
C8 |
H8 |
179.4 |
180.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
C8 |
C13 |
C12 |
O1 |
183.6 |
180.0 |
C12 |
C13 |
C8 |
H8 |
182.8 |
180.1 |
C12 |
C13 |
O1 |
C18 |
175.0 |
5.2 |
N3 |
C9 |
C8 |
H9 |
180.0 |
180.0 |
C9 |
C8 |
C13 |
O1 |
187.0 |
180.0 |
C13 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
N3 |
C9 |
C8 |
C13 |
359.4 |
0.0 |
C12 |
C13 |
C8 |
O1 |
175.8 |
180.0 |
C8 |
C13 |
C12 |
H12 |
176.8 |
180.0 |
C9 |
C8 |
C13 |
H8 |
180.0 |
179.9 |
C8 |
C13 |
O1 |
C18 |
351.3 |
185.2 |
C12 |
C13 |
O1 |
C8 |
183.7 |
180.0 |
O1 |
C13 |
C12 |
H12 |
353.2 |
0.1 |
O1 |
C13 |
C8 |
H8 |
7.0 |
0.1 |
O1 |
C18 |
C1 |
H1 |
357.1 |
359.6 |
O1 |
C18 |
C14 |
H14 |
3.7 |
0.2 |
C13 |
O1 |
C18 |
C1 |
103.0 |
76.6 |
C18 |
C1 |
C17 |
H17 |
179.1 |
179.8 |
C1 |
C18 |
C14 |
H14 |
180.9 |
179.8 |
C1 |
C17 |
C16 |
O4 |
185.1 |
180.0 |
C13 |
O1 |
C18 |
C14 |
280.4 |
256.2 |
C18 |
C14 |
C15 |
N4 |
174.8 |
180.3 |
C15 |
C14 |
C18 |
H14 |
180.0 |
179.7 |
C17 |
C16 |
C15 |
N4 |
183.4 |
180.0 |
C17 |
C16 |
O4 |
C19 |
176.4 |
180.0 |
C18 |
C14 |
C15 |
H14 |
180.0 |
180.3 |
C16 |
C15 |
C14 |
N4 |
184.5 |
180.0 |
C14 |
C15 |
N4 |
C19 |
183.7 |
180.0 |
C14 |
C15 |
C16 |
N4 |
176.4 |
180.0 |
C16 |
C15 |
C14 |
H14 |
179.3 |
180.0 |
C16 |
C15 |
N4 |
C19 |
359.7 |
0.0 |
O4 |
C16 |
C15 |
N4 |
0.1 |
359.9 |
N4 |
C15 |
C14 |
H14 |
354.8 |
360.0 |
O4 |
C19 |
N2 |
HN2 |
23.7 |
180.0 |
C16 |
O4 |
C19 |
N4 |
359.7 |
360.0 |
N4 |
C19 |
N2 |
HN2 |
210.7 |
0.0 |
C16 |
O4 |
C19 |
N2 |
186.3 |
180.0 |
C15 |
N4 |
C19 |
N2 |
173.9 |
179.9 |
N2 |
C25 |
C24 |
H24 |
353.4 |
360.0 |
N2 |
C25 |
C6 |
H6 |
5.3 |
0.0 |
C25 |
C24 |
C21 |
C10 |
1.8 |
0.0 |
C25 |
C24 |
C21 |
H21 |
181.8 |
179.8 |
C6 |
C25 |
C24 |
H24 |
178.2 |
180.0 |
C25 |
C6 |
C7 |
C10 |
359.6 |
0.1 |
C25 |
C6 |
C7 |
O3 |
181.1 |
180.0 |
C7 |
C6 |
C25 |
H6 |
180.0 |
180.0 |
C24 |
C21 |
C10 |
C7 |
358.8 |
0.1 |
C24 |
C21 |
C10 |
CL |
176.9 |
179.7 |
C10 |
C21 |
C24 |
H21 |
180.0 |
180.2 |
C25 |
C6 |
C7 |
H6 |
180.0 |
180.0 |
C21 |
C10 |
C7 |
C6 |
0.5 |
359.9 |
C10 |
C7 |
C6 |
O3 |
178.5 |
180.1 |
C6 |
C7 |
C10 |
CL |
182.4 |
180.2 |
C24 |
C21 |
C10 |
H21 |
180.0 |
179.8 |
C6 |
C7 |
C10 |
C21 |
0.5 |
359.9 |
C21 |
C10 |
C7 |
O3 |
179.2 |
180.0 |
C7 |
C10 |
C21 |
CL |
181.8 |
180.3 |
C6 |
C7 |
C10 |
O3 |
181.4 |
179.9 |
C10 |
C7 |
C6 |
H6 |
179.6 |
180.1 |
C21 |
C10 |
C7 |
CL |
178.2 |
179.7 |
C7 |
C10 |
C21 |
H21 |
178.7 |
180.3 |
C6 |
C7 |
O3 |
C10 |
178.5 |
180.1 |
O3 |
C7 |
C6 |
H6 |
1.1 |
360.0 |
O3 |
C7 |
C10 |
CL |
1.0 |
0.3 |
C21 |
C10 |
CL |
C7 |
181.7 |
180.3 |
CL |
C10 |
C21 |
H21 |
356.9 |
360.0 |
CL |
C10 |
C7 |
O3 |
1.0 |
0.3 |
C23 |
C5 |
C4 |
H41 |
359.2 |
85.8 |
C23 |
C5 |
C4 |
H42 |
120.1 |
322.6 |
H231 |
C23 |
C5 |
H232 |
120.6 |
120.0 |
C23 |
C5 |
N1 |
C4 |
116.4 |
118.5 |
N1 |
C5 |
C23 |
H231 |
205.0 |
306.4 |
N1 |
C5 |
C23 |
H232 |
84.5 |
186.4 |
C23 |
C5 |
N1 |
H5 |
240.3 |
237.0 |
C5 |
N1 |
C2 |
H21A |
117.5 |
94.0 |
C5 |
N1 |
C2 |
H22 |
235.6 |
215.4 |
C23 |
C5 |
C4 |
N1 |
242.7 |
241.5 |
C4 |
C5 |
C23 |
H231 |
316.7 |
60.3 |
C4 |
C5 |
C23 |
H232 |
196.1 |
300.2 |
C23 |
C5 |
C4 |
H5 |
119.6 |
123.1 |
C5 |
C4 |
C3 |
H31 |
122.2 |
263.0 |
C5 |
C4 |
C3 |
H32 |
241.5 |
140.9 |
H41 |
C4 |
C5 |
H42 |
239.1 |
123.1 |
C26 |
N1 |
C2 |
H21A |
351.9 |
333.5 |
C26 |
N1 |
C2 |
H22 |
110.1 |
94.8 |
C23 |
C5 |
N1 |
C2 |
120.0 |
157.6 |
C3 |
C2 |
N1 |
H21A |
240.0 |
240.7 |
C3 |
C2 |
N1 |
H22 |
121.8 |
119.3 |
N1 |
C2 |
C3 |
H31 |
240.2 |
120.1 |
N1 |
C2 |
C3 |
H32 |
120.8 |
242.2 |
H21A |
C2 |
N1 |
H22 |
241.8 |
238.7 |
C23 |
C5 |
C4 |
C3 |
239.2 |
204.1 |
C4 |
C3 |
C2 |
H21A |
240.1 |
241.9 |
C4 |
C3 |
C2 |
H22 |
122.0 |
120.6 |
C2 |
C3 |
C4 |
H31 |
240.0 |
118.9 |
C2 |
C3 |
C4 |
H32 |
120.7 |
241.0 |
H31 |
C3 |
C4 |
H32 |
240.7 |
122.1 |
N1 |
C2 |
C3 |
H21A |
120.0 |
119.4 |
N1 |
C2 |
C3 |
H22 |
238.2 |
240.6 |
C4 |
C3 |
C2 |
H31 |
120.0 |
241.1 |
C4 |
C3 |
C2 |
H32 |
239.3 |
119.0 |
H21A |
C2 |
C3 |
H22 |
118.2 |
121.3 |
H31 |
C3 |
C2 |
H32 |
119.4 |
237.9 |
C24 |
C21 |
H21 |
C10 |
180.0 |
180.2 |
H21 |
C21 |
C10 |
C7 |
178.7 |
180.3 |
H21 |
C21 |
C10 |
CL |
356.9 |
360.0 |
H24 |
C24 |
C21 |
C10 |
181.8 |
180.0 |
H24 |
C24 |
C21 |
H21 |
1.8 |
359.7 |
C25 |
C6 |
H6 |
C7 |
180.0 |
180.0 |
H6 |
C6 |
C7 |
C10 |
179.6 |
180.1 |
H6 |
C6 |
C7 |
O3 |
1.1 |
360.0 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
H12 |
C12 |
C13 |
C8 |
176.8 |
180.0 |
H12 |
C12 |
C13 |
O1 |
353.2 |
0.1 |
H8 |
C8 |
C13 |
O1 |
7.0 |
0.1 |
N3 |
C9 |
H9 |
C8 |
180.0 |
180.0 |
H9 |
C9 |
C8 |
H8 |
359.4 |
360.0 |
H14 |
C14 |
C15 |
N4 |
354.8 |
360.0 |
H17 |
C17 |
C16 |
O4 |
5.1 |
0.0 |
H1 |
C1 |
C17 |
H17 |
359.1 |
0.2 |
H221 |
C22 |
N5 |
HN5 |
241.8 |
120.0 |
H222 |
C22 |
H221 |
H223 |
120.0 |
119.9 |
H222 |
C22 |
N5 |
HN5 |
1.8 |
239.9 |
H221 |
C22 |
H222 |
H223 |
240.0 |
240.1 |
H223 |
C22 |
N5 |
HN5 |
121.8 |
359.9 |
H221 |
C22 |
H223 |
H222 |
120.0 |
119.9 |
H231 |
C23 |
C5 |
N1 |
205.0 |
306.4 |
H231 |
C23 |
C5 |
C4 |
316.7 |
60.3 |
C5 |
C23 |
H231 |
H232 |
240.5 |
240.0 |
H231 |
C23 |
C5 |
H5 |
81.2 |
183.5 |
H232 |
C23 |
C5 |
N1 |
84.5 |
186.4 |
H232 |
C23 |
C5 |
C4 |
196.1 |
300.2 |
C5 |
C23 |
H232 |
H231 |
119.7 |
120.0 |
H232 |
C23 |
C5 |
H5 |
320.7 |
63.5 |
N1 |
C2 |
H21A |
C3 |
244.0 |
242.4 |
N1 |
C2 |
H21A |
H22 |
122.0 |
121.3 |
C3 |
C2 |
H21A |
H22 |
238.0 |
238.9 |
H21A |
C2 |
C3 |
H31 |
120.2 |
0.8 |
H21A |
C2 |
C3 |
H32 |
0.8 |
122.9 |
N1 |
C2 |
H22 |
C3 |
117.3 |
117.6 |
N1 |
C2 |
H22 |
H21A |
238.6 |
238.8 |
C3 |
C2 |
H22 |
H21A |
121.3 |
121.1 |
H22 |
C2 |
C3 |
H31 |
2.0 |
239.5 |
H22 |
C2 |
C3 |
H32 |
242.6 |
1.6 |
C4 |
C3 |
H31 |
H32 |
120.6 |
237.9 |
H31 |
C3 |
C2 |
H21A |
120.2 |
0.8 |
H31 |
C3 |
C2 |
H22 |
2.0 |
239.5 |
C2 |
C3 |
H31 |
H32 |
239.3 |
122.2 |
C4 |
C3 |
H32 |
H31 |
239.6 |
122.1 |
H32 |
C3 |
C2 |
H21A |
0.8 |
122.9 |
H32 |
C3 |
C2 |
H22 |
242.6 |
1.6 |
C2 |
C3 |
H32 |
H31 |
120.5 |
237.8 |
C5 |
C4 |
H41 |
H42 |
119.1 |
236.7 |
H41 |
C4 |
C3 |
H31 |
2.2 |
21.4 |
H41 |
C4 |
C3 |
H32 |
121.5 |
259.3 |
C5 |
C4 |
H42 |
H41 |
240.6 |
123.2 |
H42 |
C4 |
C3 |
H31 |
241.3 |
144.5 |
H42 |
C4 |
C3 |
H32 |
0.6 |
22.4 |
C23 |
C5 |
H5 |
N1 |
122.1 |
123.0 |
C23 |
C5 |
H5 |
C4 |
238.8 |
236.8 |
H5 |
C5 |
C23 |
H231 |
81.2 |
183.5 |
H5 |
C5 |
C23 |
H232 |
320.7 |
63.5 |
H5 |
C5 |
C4 |
H41 |
239.6 |
322.6 |
H5 |
C5 |
C4 |
H42 |
0.5 |
199.5 |
H262 |
C26 |
H261 |
H263 |
120.0 |
120.0 |
H261 |
C26 |
H262 |
H263 |
240.0 |
239.9 |
H261 |
C26 |
H263 |
H262 |
120.0 |
120.1 |