PDB Chemical Component 80O

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 80O

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C	O	1.437	1.429
O	C1	1.405	1.359
C1	C19	1.426	1.388
C1	C2	1.424	1.387
C19	C5	1.418	1.382
C5	C4	1.398	1.383
C5	C6	1.566	1.506
C4	C3	1.429	1.383
C3	C2	1.378	1.381
C6	C7	1.567	1.507
C7	N1	1.334	1.376
C7	N	1.313	1.292
N1	C8	1.323	1.348
C8	O1	1.236	1.216
C8	C9	1.476	1.475
C9	C13	1.423	1.404
C9	C10	1.384	1.400
C13	N2	1.312	1.322
C13	O2	1.336	1.354
N2	C12	1.328	1.318
C12	C11	1.398	1.384
C11	C10	1.407	1.383
O2	C14	1.486	1.428
C14	C18	1.512	1.531
C14	C15	1.553	1.531
C18	C17	1.520	1.531
C17	N3	1.500	1.469
N3	C16	1.482	1.468
C16	C15	1.542	1.531
C	HC1	1.100	1.090
C	HC2	1.100	1.091
C	HC3	1.100	1.090
C19	H19	1.081	1.080
C2	H2	1.080	1.081
C4	H4	1.080	1.080
C6	H61C	1.100	1.091
C6	H62C	1.100	1.090
C3	H3	1.080	1.081
N1	H1	1.000	0.970
N	H	1.000	0.970
C10	H10	1.080	1.081
C12	H12	1.079	1.080
C11	H11	1.080	1.080
C14	H14	1.100	1.090
C18	H181	1.100	1.090
C18	H182	1.100	1.090
C15	H151	1.100	1.091
C15	H152	1.100	1.090
C17	H171	1.100	1.091
C17	H172	1.099	1.090
N3	HA	1.000	1.009
C16	H161	1.100	1.090
C16	H162	1.100	1.089

Bond Angles for 80O

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C	O	C1	121.5	117.0
O	C	HC1	109.5	109.5
O	C	HC2	109.5	109.4
O	C	HC3	109.5	109.5
O	C1	C19	122.1	120.0
O	C1	C2	117.4	120.1
C19	C1	C2	120.3	119.9
C1	C19	C5	118.7	119.9
C1	C19	H19	120.7	120.0
C1	C2	C3	119.1	120.0
C1	C2	H2	120.4	120.0
C19	C5	C4	121.2	120.0
C19	C5	C6	122.3	120.0
C5	C19	H19	120.6	120.1
C4	C5	C6	116.5	120.0
C5	C4	C3	118.5	120.1
C5	C4	H4	120.7	119.9
C5	C6	C7	110.1	109.5
C5	C6	H61C	109.3	109.5
C5	C6	H62C	109.3	109.5
C4	C3	C2	122.0	120.1
C3	C4	H4	120.8	120.0
C4	C3	H3	119.0	119.9
C3	C2	H2	120.4	120.0
C2	C3	H3	119.0	120.0
C6	C7	N1	124.0	120.0
C6	C7	N	116.2	120.0
C7	C6	H61C	109.3	109.4
C7	C6	H62C	109.3	109.5
N1	C7	N	119.8	120.0
C7	N1	C8	114.9	120.0
C7	N1	H1	122.5	120.0
C7	N	H	112.0	120.0
N1	C8	O1	121.2	120.0
N1	C8	C9	121.2	120.0
C8	N1	H1	122.5	120.0
O1	C8	C9	117.7	120.0
C8	C9	C13	123.4	120.6
C8	C9	C10	118.4	120.6
C13	C9	C10	118.1	118.8
C9	C13	N2	119.4	120.3
C9	C13	O2	118.8	119.8
C9	C10	C11	120.4	118.4
C9	C10	H10	119.8	120.8
N2	C13	O2	121.8	119.8
C13	N2	C12	123.6	121.9
C13	O2	C14	118.7	117.0
N2	C12	C11	120.6	121.2
N2	C12	H12	119.7	119.5
C12	C11	C10	117.2	119.5
C11	C12	H12	119.7	119.4
C12	C11	H11	121.4	120.2
C11	C10	H10	119.8	120.9
C10	C11	H11	121.4	120.3
O2	C14	C18	104.6	109.5
O2	C14	C15	106.0	109.5
O2	C14	H14	111.7	109.5
C18	C14	C15	112.1	109.2
C14	C18	C17	113.9	109.3
C18	C14	H14	111.3	109.5
C14	C18	H181	108.3	109.5
C14	C18	H182	108.4	109.5
C14	C15	C16	109.6	109.3
C15	C14	H14	110.8	109.6
C14	C15	H151	109.4	109.5
C14	C15	H152	109.5	109.5
C18	C17	N3	108.5	109.5
C17	C18	H181	108.3	109.5
C17	C18	H182	108.4	109.5
C18	C17	H171	109.7	109.5
C18	C17	H172	109.7	109.5
C17	N3	C16	109.0	111.2
N3	C17	H171	109.7	109.4
N3	C17	H172	109.7	109.5
C17	N3	HA	109.6	111.0
N3	C16	C15	110.9	109.5
C16	N3	HA	109.6	111.0
N3	C16	H161	109.1	109.5
N3	C16	H162	109.1	109.5
C16	C15	H151	109.5	109.5
C16	C15	H152	109.4	109.5
C15	C16	H161	109.1	109.4
C15	C16	H162	109.1	109.5
HC1	C	HC2	109.4	109.5
HC1	C	HC3	109.5	109.5
HC2	C	HC3	109.4	109.5
H61C	C6	H62C	109.5	109.5
H181	C18	H182	109.5	109.6
H151	C15	H152	109.4	109.5
H171	C17	H172	109.5	109.5
H161	C16	H162	109.5	109.4

Torsion Angles for 80O

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C	O	C1	C19	339.0	180.1
C	O	C1	C2	163.8	359.8
HC1	C	O	HC2	240.0	240.0
HC1	C	O	HC3	120.0	120.1
HC2	C	O	HC3	240.0	240.1
C1	O	C	HC1	180.0	180.0
C1	O	C	HC2	300.0	300.0
C1	O	C	HC3	60.0	59.9
C19	C1	O	C2	175.3	180.3
O	C1	C19	C5	181.9	180.0
O	C1	C19	H19	1.9	360.0
O	C1	C2	C3	178.5	179.7
O	C1	C2	H2	358.5	360.0
O	C1	C19	C2	184.9	179.7
C19	C1	C2	C3	3.1	359.4
C19	C1	C2	H2	183.2	179.7
C1	C19	C5	C4	0.5	360.0
C1	C19	C5	C6	180.5	180.0
C5	C19	C1	H19	180.0	180.0
O	C1	C2	C19	175.3	180.3
C2	C1	C19	C5	357.0	0.3
C2	C1	C19	H19	177.0	180.2
C4	C3	C2	C1	359.2	0.6
C3	C2	C1	H2	180.0	179.7
C1	C2	C3	H3	179.2	180.3
C5	C19	C1	C2	357.0	0.3
C1	C19	C5	H19	180.0	180.0
C4	C5	C19	C6	180.0	180.0
C19	C5	C4	C3	1.7	0.0
C19	C5	C4	H4	181.7	179.9
C19	C5	C6	C7	259.8	90.0
C19	C5	C6	H61C	19.9	210.0
C19	C5	C6	H62C	139.7	330.0
C19	C5	C4	C6	180.0	180.0
C4	C5	C19	H19	180.6	180.0
C4	C5	C6	C7	79.8	270.0
C4	C5	C6	H61C	199.9	30.0
C4	C5	C6	H62C	319.7	150.0
C5	C4	C3	C2	358.4	359.7
C3	C4	C5	H4	180.0	180.1
C5	C4	C3	H3	178.4	179.9
C19	C5	C6	C4	180.0	180.0
C6	C5	C19	H19	0.5	0.0
C6	C5	C4	C3	181.7	180.0
C6	C5	C4	H4	1.7	359.9
C5	C6	C7	N1	83.0	180.0
C5	C6	C7	N	261.9	360.0
C7	C6	C5	H61C	239.9	240.0
C7	C6	C5	H62C	120.1	120.0
H61C	C6	C5	H62C	240.2	240.0
C1	C2	C3	C4	359.2	0.6
C3	C4	C5	C6	181.7	180.0
C5	C4	C3	H4	180.0	179.9
C4	C3	C2	H2	179.2	180.3
C2	C3	C4	H3	180.0	179.7
C1	C2	C3	H2	180.0	180.3
C2	C3	C4	H4	178.4	179.8
C4	C3	C2	H3	180.0	180.3
C5	C6	C7	H61C	120.1	120.0
C5	C6	C7	H62C	239.9	240.0
N1	C7	C6	N	181.1	180.0
C6	C7	N1	C8	181.8	174.8
C6	C7	N1	H1	1.8	354.7
C6	C7	N	H	181.1	185.4
H61C	C6	C7	H62C	119.8	120.0
C6	C7	N1	N	178.9	180.0
N1	C7	C6	H61C	322.9	60.0
N1	C7	C6	H62C	203.1	300.0
N1	C7	N	H	0.0	5.4
C7	N1	C8	O1	6.4	5.6
C7	N1	C8	C9	186.1	185.6
C8	N1	C7	H1	180.0	180.1
C6	C7	N	N1	181.0	180.0
N	C7	C6	H61C	141.8	240.0
N	C7	C6	H62C	22.0	120.0
N	C7	N1	C8	2.9	354.8
N	C7	N1	H1	182.9	174.7
C8	N1	C7	N	2.9	354.8
C7	N1	C8	H1	180.0	179.9
O1	C8	N1	C9	180.3	180.0
N1	C8	C9	C13	217.1	180.0
N1	C8	C9	C10	32.7	359.7
N1	C8	O1	C9	179.7	180.0
O1	C8	N1	H1	186.4	185.7
O1	C8	C9	C13	36.8	0.0
O1	C8	C9	C10	212.4	179.7
N1	C8	C9	O1	180.3	180.0
C9	C8	N1	H1	6.1	5.7
C13	C9	C8	C10	184.4	180.3
C8	C9	C13	N2	182.9	180.0
C8	C9	C13	O2	1.4	360.0
C8	C9	C10	C11	179.7	179.7
C8	C9	C10	H10	359.7	360.0
C8	C9	C13	C10	175.6	179.7
C13	C9	C10	C11	355.5	359.4
C13	C9	C10	H10	175.5	179.7
N2	C13	C9	O2	181.6	180.0
C9	C13	N2	C12	357.4	360.0
C9	C13	O2	C14	155.6	180.0
C8	C9	C10	C13	184.2	180.3
C10	C9	C13	N2	7.4	0.3
C10	C9	C13	O2	185.8	180.3
C12	C11	C10	C9	357.1	0.6
C11	C10	C9	H10	180.0	179.8
C9	C10	C11	H11	177.1	180.3
N2	C13	C9	C10	7.4	0.3
C9	C13	N2	O2	178.4	180.0
N2	C13	O2	C14	334.0	360.0
C13	N2	C12	C11	354.8	0.0
C13	N2	C12	H12	174.8	180.0
O2	C13	C9	C10	185.8	180.3
C9	C13	O2	N2	181.6	180.0
O2	C13	N2	C12	179.0	180.0
C13	O2	C14	C18	108.0	150.0
C13	O2	C14	C15	226.7	269.7
C13	O2	C14	H14	347.5	29.9
C12	N2	C13	O2	179.0	180.0
N2	C12	C11	C10	7.8	359.7
C11	C12	N2	H12	180.0	180.0
N2	C12	C11	H11	187.8	180.0
C9	C10	C11	C12	357.1	0.6
N2	C12	C11	H12	180.0	180.0
C12	C11	C10	H10	177.2	180.3
C10	C11	C12	H11	180.0	179.7
C9	C10	C11	H10	180.0	180.2
C10	C11	C12	H12	187.8	179.7
C12	C11	C10	H11	180.0	180.3
C18	C14	O2	C15	241.3	240.3
O2	C14	C18	C17	65.3	177.5
C18	C14	O2	H14	120.5	120.1
O2	C14	C18	H181	185.9	297.5
O2	C14	C18	H182	304.6	57.6
O2	C14	C15	C16	294.0	182.5
C15	C14	O2	H14	239.2	239.8
O2	C14	C15	H151	54.1	302.4
O2	C14	C15	H152	174.0	62.5
O2	C14	C18	C15	114.4	119.9
O2	C14	C18	H14	239.2	239.9
C18	C14	C15	C16	47.6	302.4
C15	C14	C18	H14	124.7	120.0
C18	C14	C15	H151	167.6	62.3
C18	C14	C15	H152	287.5	182.4
C14	C18	C17	N3	56.1	300.8
C17	C18	C14	H181	239.4	240.1
C17	C18	C14	H182	120.7	119.9
C14	C18	C17	H171	176.0	60.8
C14	C18	C17	H172	296.2	180.8
H181	C18	C14	H182	241.3	239.8
O2	C14	C15	C18	246.5	240.1
O2	C14	C15	H14	121.4	120.2
C15	C14	C18	C17	310.9	57.6
C18	C14	C15	H14	235.0	240.1
C15	C14	C18	H181	71.5	177.5
C15	C14	C18	H182	190.2	297.7
N3	C16	C15	C14	303.5	59.2
C16	C15	C14	H151	240.0	240.1
C16	C15	C14	H152	120.0	120.0
C14	C15	C16	H161	183.3	299.2
C14	C15	C16	H162	63.7	179.2
H151	C15	C14	H152	240.1	239.9
C17	C18	C14	C15	310.9	57.6
C17	C18	C14	H14	186.1	297.7
C14	C18	C17	H181	120.6	120.0
C14	C18	C17	H182	239.3	240.0
C18	C17	N3	C16	296.7	61.7
N3	C17	C18	H171	240.1	240.0
N3	C17	C18	H172	119.8	120.0
C18	C17	N3	HA	56.7	185.8
H181	C18	C17	H182	118.7	120.1
H171	C17	C18	H172	239.7	240.0
N3	C17	C18	H181	295.5	180.9
N3	C17	C18	H182	176.8	60.8
C18	C17	N3	H171	119.8	120.0
C18	C17	N3	H172	240.1	240.0
C17	N3	C16	C15	65.5	298.3
C16	N3	C17	HA	240.1	236.0
C17	N3	C16	H161	185.7	58.2
C17	N3	C16	H162	305.2	178.2
H171	C17	N3	H172	120.3	120.0
C14	C15	C16	N3	303.5	59.2
C16	N3	C17	H171	176.9	301.7
C16	N3	C17	H172	56.6	181.8
C17	N3	C16	HA	120.0	124.1
N3	C16	C15	H151	183.5	299.2
N3	C16	C15	H152	63.5	179.1
C15	C16	N3	H161	239.8	240.1
C15	C16	N3	H162	120.2	120.1
H161	C16	N3	H162	240.4	240.0
C16	C15	C14	H14	172.6	62.3
C14	C15	C16	H151	120.0	120.0
C14	C15	C16	H152	240.0	240.0
C15	C16	N3	HA	305.5	174.2
N3	C16	C15	H161	120.2	120.0
N3	C16	C15	H162	239.8	239.9
H151	C15	C16	H152	119.9	120.1
H161	C16	C15	H162	119.5	119.9
HC1	C	O	C1	180.0	180.0
O	C	HC1	HC2	120.0	119.9
O	C	HC1	HC3	240.0	239.9
HC2	C	HC1	HC3	120.0	120.0
HC2	C	O	C1	300.0	300.0
O	C	HC2	HC1	240.0	240.0
O	C	HC2	HC3	120.0	120.0
HC1	C	HC2	HC3	240.0	239.9
HC3	C	O	C1	60.0	59.9
O	C	HC3	HC1	120.0	120.1
O	C	HC3	HC2	240.0	240.1
HC1	C	HC3	HC2	120.0	120.0
H19	C19	C1	C2	177.0	180.2
C1	C19	H19	C5	180.0	180.0
H19	C19	C5	C4	180.6	180.0
H19	C19	C5	C6	0.5	0.0
C1	C2	H2	C3	180.0	179.7
H2	C2	C3	H3	359.1	0.1
H4	C4	C5	C6	1.7	359.9
C5	C4	H4	C3	180.0	180.1
H4	C4	C3	C2	178.4	179.8
H4	C4	C3	H3	358.4	0.0
C5	C6	H61C	C7	239.4	240.0
C5	C6	H61C	H62C	119.7	120.0
H61C	C6	C7	N1	322.9	60.0
H61C	C6	C7	N	141.8	240.0
C7	C6	H61C	H62C	240.3	240.0
C5	C6	H62C	C7	120.6	120.0
C5	C6	H62C	H61C	240.3	240.0
H62C	C6	C7	N1	203.1	300.0
H62C	C6	C7	N	22.0	120.0
C7	C6	H62C	H61C	119.7	120.0
C4	C3	H3	C2	180.0	179.7
H3	C3	C4	H4	358.4	0.0
H3	C3	C2	H2	359.1	0.1
H1	N1	C7	N	182.9	174.7
C7	N1	H1	C8	180.0	180.1
H1	N1	C8	O1	186.4	185.7
H1	N1	C8	C9	6.1	5.7
C9	C10	H10	C11	180.0	179.8
H10	C10	C11	H11	357.2	0.0
N2	C12	H12	C11	180.0	180.0
H12	C12	C11	C10	187.8	179.7
H12	C12	C11	H11	7.8	0.1
C12	C11	H11	C10	180.0	179.7
H11	C11	C12	H12	7.8	0.1
H11	C11	C10	H10	357.2	0.0
O2	C14	H14	C18	116.5	120.1
O2	C14	H14	C15	242.0	239.8
C18	C14	H14	C15	125.5	119.7
H14	C14	C18	C17	186.1	297.7
H14	C14	C18	H181	306.8	57.6
H14	C14	C18	H182	65.5	177.8
H14	C14	C15	C16	172.6	62.3
H14	C14	C15	H151	292.6	182.2
H14	C14	C15	H152	52.6	302.3
H181	C18	C14	C15	71.5	177.5
C14	C18	H181	C17	236.0	240.2
H181	C18	C14	H14	306.8	57.6
C14	C18	H181	H182	118.0	120.1
H181	C18	C17	N3	295.5	180.9
C17	C18	H181	H182	242.0	240.0
H181	C18	C17	H171	55.3	300.8
H181	C18	C17	H172	175.6	60.8
H182	C18	C14	C15	190.2	297.7
C14	C18	H182	C17	124.0	119.8
H182	C18	C14	H14	65.5	177.8
C14	C18	H182	H181	242.0	239.8
H182	C18	C17	N3	176.8	60.8
C17	C18	H182	H181	118.0	120.0
H182	C18	C17	H171	296.6	180.8
H182	C18	C17	H172	56.9	300.8
C14	C15	H151	C16	239.9	240.2
H151	C15	C14	H14	292.6	182.2
C14	C15	H151	H152	120.0	120.1
C16	C15	H151	H152	240.1	239.9
H151	C15	C16	H161	63.2	179.2
H151	C15	C16	H162	303.7	59.3
C14	C15	H152	C16	120.1	119.9
H152	C15	C14	H14	52.6	302.3
C14	C15	H152	H151	240.1	239.9
C16	C15	H152	H151	120.0	120.0
H152	C15	C16	H161	303.3	59.1
H152	C15	C16	H162	183.8	299.2
C18	C17	H171	N3	240.9	240.0
H171	C17	C18	H181	55.3	300.8
H171	C17	C18	H182	296.6	180.8
C18	C17	H171	H172	120.5	120.0
H171	C17	N3	C16	176.9	301.7
N3	C17	H171	H172	239.5	240.0
H171	C17	N3	HA	296.8	65.8
C18	C17	H172	N3	119.1	120.1
H172	C17	C18	H181	175.6	60.8
H172	C17	C18	H182	56.9	300.8
C18	C17	H172	H171	239.6	240.0
H172	C17	N3	C16	56.6	181.8
N3	C17	H172	H171	120.5	119.9
H172	C17	N3	HA	176.5	305.8
C17	N3	HA	C16	240.4	235.8
HA	N3	C17	H171	296.8	65.8
HA	N3	C17	H172	176.5	305.8
HA	N3	C16	C15	305.5	174.2
HA	N3	C16	H161	65.7	294.2
HA	N3	C16	H162	185.3	54.2
N3	C16	H161	C15	238.7	240.0
H161	C16	N3	HA	65.7	294.2
N3	C16	H161	H162	119.4	120.0
H161	C16	C15	H151	63.2	179.2
H161	C16	C15	H152	303.3	59.1
C15	C16	H161	H162	240.7	240.0
N3	C16	H162	C15	121.3	120.1
H162	C16	N3	HA	185.3	54.2
N3	C16	H162	H161	240.6	240.0
H162	C16	C15	H151	303.7	59.3
H162	C16	C15	H152	183.8	299.2
C15	C16	H162	H161	119.3	119.9