PDB Chemical Component 7Y6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7Y6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CL C12 1.755 1.736
C12 C11 1.377 1.387
C12 C13 1.396 1.382
C11 C10 1.373 1.377
C10 C9 1.395 1.398
C13 C14 1.372 1.386
C14 O2 1.402 1.356
C14 C9 1.385 1.403
O2 C15 1.445 1.429
C15 C19 1.515 1.531
C15 C16 1.535 1.531
C19 C18 1.526 1.530
C18 N2 1.483 1.468
N2 C17 1.484 1.468
C17 C16 1.537 1.530
C9 C8 1.461 1.474
C8 O1 1.309 1.216
C8 N1 1.272 1.347
N C7 1.330 1.291
N1 C7 1.342 1.377
C7 C6 1.522 1.507
C6 C5 1.554 1.507
C5 C4 1.380 1.382
C5 C20 1.410 1.381
C4 C3 1.400 1.383
C3 C2 1.409 1.381
C2 C1 1.424 1.388
C20 C1 1.398 1.388
C1 O 1.382 1.358
O C 1.442 1.430
C11 H11 1.080 1.080
C13 H13 1.080 1.080
C10 H10 1.080 1.080
C15 H15 1.100 1.090
C19 H191 1.100 1.089
C19 H192 1.100 1.090
C16 H161 1.100 1.090
C16 H162 1.100 1.090
C18 H181 1.100 1.090
C18 H182 1.100 1.091
N2 H2 1.000 1.009
C17 H171 1.100 1.091
C17 H172 1.100 1.090
N1 H1 1.000 0.969
N H 1.000 0.970
C6 H61C 1.100 1.090
C6 H62C 1.100 1.090
C4 H4 1.080 1.080
C20 H20 1.080 1.079
C3 H3 1.080 1.080
C2 HA 1.080 1.080
C HC1 1.100 1.090
C HC2 1.100 1.090
C HC3 1.100 1.090

Bond Angles for 7Y6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
CL C12 C11 116.0 119.8
CL C12 C13 119.8 119.9
C11 C12 C13 124.1 120.3
C12 C11 C10 115.7 120.3
C12 C11 H11 122.2 119.9
C12 C13 C14 120.4 120.1
C12 C13 H13 119.7 119.9
C11 C10 C9 120.3 119.9
C10 C11 H11 122.2 119.8
C11 C10 H10 119.8 120.1
C10 C9 C14 124.1 119.6
C10 C9 C8 109.2 120.2
C9 C10 H10 119.9 120.0
C13 C14 O2 118.2 120.2
C13 C14 C9 115.4 119.7
C14 C13 H13 119.8 120.0
O2 C14 C9 126.4 120.2
C14 O2 C15 120.9 117.0
C14 C9 C8 126.4 120.2
O2 C15 C19 110.8 109.6
O2 C15 C16 113.9 109.5
O2 C15 H15 109.2 109.5
C19 C15 C16 106.4 109.2
C15 C19 C18 108.0 109.2
C19 C15 H15 108.3 109.5
C15 C19 H191 109.9 109.5
C15 C19 H192 109.8 109.5
C15 C16 C17 111.3 109.3
C16 C15 H15 108.0 109.6
C15 C16 H161 109.0 109.5
C15 C16 H162 109.0 109.5
C19 C18 N2 111.3 109.6
C18 C19 H191 109.8 109.6
C18 C19 H192 109.9 109.5
C19 C18 H181 109.0 109.5
C19 C18 H182 109.0 109.4
C18 N2 C17 115.5 111.2
N2 C18 H181 109.0 109.5
N2 C18 H182 109.0 109.5
C18 N2 H2 108.0 111.0
N2 C17 C16 114.1 109.5
C17 N2 H2 107.9 111.0
N2 C17 H171 108.3 109.5
N2 C17 H172 108.3 109.4
C17 C16 H161 109.0 109.5
C17 C16 H162 109.0 109.6
C16 C17 H171 108.3 109.4
C16 C17 H172 108.3 109.5
C9 C8 O1 110.6 120.0
C9 C8 N1 122.0 120.0
O1 C8 N1 126.1 120.0
C8 N1 C7 125.3 120.0
C8 N1 H1 117.4 120.0
N C7 N1 120.7 120.0
N C7 C6 117.8 120.0
C7 N H 112.0 120.0
N1 C7 C6 121.4 120.0
C7 N1 H1 117.4 120.0
C7 C6 C5 107.5 109.4
C7 C6 H61C 109.9 109.5
C7 C6 H62C 109.9 109.5
C6 C5 C4 120.7 120.0
C6 C5 C20 120.5 120.0
C5 C6 H61C 109.9 109.4
C5 C6 H62C 110.0 109.5
C4 C5 C20 118.7 120.1
C5 C4 C3 121.3 120.1
C5 C4 H4 119.4 119.9
C5 C20 C1 121.2 119.9
C5 C20 H20 119.4 120.0
C4 C3 C2 120.8 120.1
C3 C4 H4 119.4 120.0
C4 C3 H3 119.6 119.9
C3 C2 C1 118.2 119.9
C2 C3 H3 119.6 120.0
C3 C2 HA 120.9 120.1
C2 C1 C20 119.8 119.9
C2 C1 O 119.4 120.1
C1 C2 HA 120.9 120.0
C20 C1 O 120.8 120.1
C1 C20 H20 119.4 120.0
C1 O C 120.7 117.0
O C HC1 109.5 109.4
O C HC2 109.5 109.4
O C HC3 109.5 109.5
H191 C19 H192 109.4 109.5
H161 C16 H162 109.5 109.5
H181 C18 H182 109.5 109.4
H171 C17 H172 109.5 109.5
H61C C6 H62C 109.5 109.5
HC1 C HC2 109.5 109.5
HC1 C HC3 109.5 109.5
HC2 C HC3 109.4 109.5

Torsion Angles for 7Y6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C11 C12 CL C13 178.7 180.2
CL C12 C11 C10 182.1 180.0
CL C12 C11 H11 2.1 360.0
CL C12 C13 C14 177.8 180.1
CL C12 C13 H13 357.8 359.9
CL C12 C11 C13 181.4 179.8
C11 C12 C13 C14 359.2 359.8
C11 C12 C13 H13 179.2 179.7
C12 C11 C10 C9 358.5 360.0
C10 C11 C12 H11 180.0 180.0
C12 C11 C10 H10 178.5 179.9
CL C12 C13 C11 178.6 180.2
C13 C12 C11 C10 0.7 0.3
C13 C12 C11 H11 180.7 180.2
C12 C13 C14 O2 178.5 180.0
C12 C13 C14 C9 1.6 359.9
C14 C13 C12 H13 180.0 180.2
C10 C11 C12 C13 0.7 0.3
C12 C11 C10 H11 180.0 180.0
C11 C10 C9 C14 2.6 359.7
C11 C10 C9 C8 176.1 180.0
C9 C10 C11 H10 180.0 180.1
C9 C10 C11 H11 178.5 180.0
C11 C10 C9 H10 180.0 179.9
C13 C14 C9 C10 357.5 0.4
O2 C14 C9 C10 180.8 180.3
C14 C9 C10 C8 186.5 179.7
C10 C9 C8 O1 224.7 180.0
C10 C9 C8 N1 32.3 0.0
C12 C13 C14 H13 180.0 179.8
C10 C9 C14 C13 357.5 0.4
O2 C14 C13 C9 176.9 180.1
C13 C14 O2 C15 330.1 5.5
C13 C14 C9 C8 185.0 180.1
C10 C9 C14 O2 180.8 180.3
C13 C14 O2 C9 183.5 179.9
O2 C14 C13 H13 358.5 0.1
O2 C14 C9 C8 8.4 0.0
C14 O2 C15 C19 119.3 155.1
C14 O2 C15 C16 239.3 274.8
C14 O2 C15 H15 0.2 35.0
C10 C9 C14 C8 172.4 180.3
C14 C9 C10 H10 182.6 179.8
C13 C14 C9 O2 176.6 180.1
C9 C14 C13 H13 181.6 180.0
C9 C14 O2 C15 146.6 185.6
C14 C9 C8 O1 38.0 0.2
C14 C9 C8 N1 205.6 180.3
C15 O2 C14 C9 146.6 185.6
C19 C15 O2 C16 240.1 240.3
O2 C15 C19 C18 57.1 177.5
C19 C15 O2 H15 119.2 120.1
O2 C15 C19 H191 176.9 297.5
O2 C15 C19 H192 297.3 57.6
O2 C15 C16 C17 297.5 182.5
C16 C15 O2 H15 239.1 239.9
O2 C15 C16 H161 57.8 302.3
O2 C15 C16 H162 177.2 62.4
O2 C15 C19 C16 124.3 119.9
O2 C15 C19 H15 240.3 239.9
C19 C15 C16 C17 59.9 302.4
C16 C15 C19 H15 115.9 120.0
C19 C15 C16 H161 180.1 62.3
C19 C15 C16 H162 299.6 182.4
C15 C19 C18 N2 61.8 300.8
C18 C19 C15 H191 240.2 240.0
C18 C19 C15 H192 119.8 120.0
C15 C19 C18 H181 182.1 60.9
C15 C19 C18 H182 301.6 180.8
H191 C19 C15 H192 239.6 240.0
O2 C15 C16 C19 237.6 240.1
O2 C15 C16 H15 121.5 120.1
C16 C15 C19 C18 292.8 57.6
C19 C15 C16 H15 243.9 240.1
C16 C15 C19 H191 52.6 177.6
C16 C15 C19 H192 173.0 297.7
N2 C17 C16 C15 313.3 59.1
C17 C16 C15 H161 239.7 240.1
C17 C16 C15 H162 120.3 120.0
C15 C16 C17 H171 192.6 299.1
C15 C16 C17 H172 74.0 179.2
H161 C16 C15 H162 240.6 239.9
C18 C19 C15 C16 292.8 57.6
C18 C19 C15 H15 176.9 297.7
C15 C19 C18 H191 119.8 120.0
C15 C19 C18 H192 240.2 240.1
C19 C18 N2 C17 311.9 61.8
N2 C18 C19 H181 239.7 239.9
N2 C18 C19 H182 120.3 120.0
C19 C18 N2 H2 72.8 185.8
H191 C19 C18 H192 120.4 120.1
H181 C18 C19 H182 240.6 240.1
N2 C18 C19 H191 302.1 180.9
N2 C18 C19 H192 181.6 60.7
C19 C18 N2 H181 120.3 120.1
C19 C18 N2 H182 239.7 240.0
C18 N2 C17 C16 40.7 298.3
C17 N2 C18 H2 239.1 235.9
C18 N2 C17 H171 161.4 58.3
C18 N2 C17 H172 280.0 178.2
H181 C18 N2 H182 119.4 120.0
C15 C16 C17 N2 313.3 59.1
C17 N2 C18 H181 191.6 301.7
C17 N2 C18 H182 72.2 181.8
C18 N2 C17 H2 120.9 124.1
N2 C17 C16 H161 193.0 299.3
N2 C17 C16 H162 73.6 179.1
C16 C17 N2 H171 239.3 240.0
C16 C17 N2 H172 120.7 120.0
H171 C17 N2 H172 241.4 240.0
C17 C16 C15 H15 176.0 62.3
C15 C16 C17 H161 120.3 119.9
C15 C16 C17 H162 239.7 240.0
C16 C17 N2 H2 279.7 174.2
N2 C17 C16 H171 120.7 120.0
N2 C17 C16 H172 239.3 240.0
H161 C16 C17 H162 119.4 120.1
H171 C17 C16 H172 118.6 120.0
C10 C9 C8 C14 186.7 179.7
C8 C9 C10 H10 356.2 0.0
O1 C8 C9 N1 192.4 180.0
C9 C8 N1 C7 186.0 180.0
C9 C8 N1 H1 6.0 360.0
C9 C8 O1 N1 167.0 180.0
O1 C8 N1 C7 351.6 0.0
O1 C8 N1 H1 171.6 180.0
C9 C8 N1 O1 194.4 180.0
N C7 N1 C8 2.1 360.0
C8 N1 C7 C6 186.3 180.0
C7 N1 C8 H1 180.0 180.0
C8 N1 C7 N 2.1 360.0
N1 C7 N C6 184.1 180.0
N C7 N1 H1 182.1 180.0
N C7 C6 C5 264.1 360.0
N C7 C6 H61C 23.8 119.9
N C7 C6 H62C 144.4 240.0
C8 N1 C7 H1 180.0 180.0
N C7 N1 C6 175.7 180.0
N1 C7 N H 184.1 180.1
N1 C7 C6 C5 80.0 180.0
N1 C7 C6 H61C 199.7 299.9
N1 C7 C6 H62C 320.3 60.0
N C7 C6 N1 184.1 180.0
C6 C7 N H 360.0 0.1
C6 C7 N1 H1 6.3 0.0
C7 C6 C5 C4 70.6 90.0
C7 C6 C5 C20 252.4 269.7
C5 C6 C7 H61C 240.3 240.1
C5 C6 C7 H62C 119.7 120.0
H61C C6 C7 H62C 239.4 239.9
C7 C6 C5 H61C 119.7 120.0
C7 C6 C5 H62C 240.3 240.0
C4 C5 C6 C20 178.2 180.3
C6 C5 C4 C3 180.2 180.0
C6 C5 C4 H4 0.2 359.9
C6 C5 C20 C1 180.0 179.8
C6 C5 C20 H20 360.0 0.0
H61C C6 C5 H62C 120.6 120.0
C6 C5 C4 C20 181.8 179.7
C4 C5 C6 H61C 310.9 330.1
C4 C5 C6 H62C 190.3 210.1
C4 C5 C20 C1 1.8 359.5
C4 C5 C20 H20 181.8 179.7
C5 C4 C3 C2 1.5 359.9
C3 C4 C5 H4 180.0 180.1
C5 C4 C3 H3 181.4 179.9
C6 C5 C20 C4 178.2 180.3
C20 C5 C6 H61C 132.7 149.7
C20 C5 C6 H62C 12.1 29.7
C20 C5 C4 C3 358.4 0.3
C20 C5 C4 H4 178.4 180.3
C2 C1 C20 C5 358.2 0.4
C5 C20 C1 O 180.5 180.3
C1 C20 C5 H20 180.0 179.8
C3 C4 C5 C20 358.4 0.3
C5 C4 C3 H4 180.0 179.9
C4 C3 C2 C1 358.6 0.0
C2 C3 C4 H3 180.0 180.0
C4 C3 C2 HA 178.6 180.0
C2 C3 C4 H4 181.4 180.0
C4 C3 C2 H3 180.0 180.0
C3 C2 C1 C20 1.6 359.8
C3 C2 C1 O 179.3 180.0
C1 C2 C3 HA 180.0 180.0
C5 C20 C1 C2 358.2 0.4
C1 C2 C3 H3 178.6 180.0
C3 C2 C1 HA 180.0 180.0
C20 C1 C2 O 182.2 179.9
C2 C1 C20 H20 178.2 180.2
C2 C1 O C 171.2 0.0
C5 C20 C1 H20 180.0 180.2
C2 C1 C20 O 177.7 180.1
C20 C1 C2 HA 181.6 179.8
C20 C1 O C 349.0 180.2
C2 C1 O C20 182.3 179.9
O C1 C2 HA 359.3 360.0
O C1 C20 H20 0.5 0.1
C1 O C HC1 180.0 300.0
C1 O C HC2 300.0 60.0
C1 O C HC3 60.0 180.0
HC1 C O HC2 240.0 240.0
HC1 C O HC3 120.0 120.0
HC2 C O HC3 240.0 240.0
H11 C11 C12 C13 180.7 180.2
C12 C11 H11 C10 180.0 180.0
H11 C11 C10 C9 178.5 180.0
H11 C11 C10 H10 358.5 359.9
C12 C13 H13 C14 180.0 180.2
H13 C13 C14 O2 358.5 0.1
H13 C13 C14 C9 181.6 180.0
C11 C10 H10 C9 180.0 180.1
H10 C10 C11 H11 358.5 359.9
H10 C10 C9 C14 182.6 179.8
H10 C10 C9 C8 356.2 0.0
O2 C15 H15 C19 120.7 120.1
O2 C15 H15 C16 235.6 239.9
C19 C15 H15 C16 114.9 119.7
H15 C15 C19 C18 176.9 297.7
H15 C15 C19 H191 296.6 57.7
H15 C15 C19 H192 57.1 177.7
H15 C15 C16 C17 176.0 62.3
H15 C15 C16 H161 296.2 182.2
H15 C15 C16 H162 55.7 302.3
H191 C19 C15 C16 52.6 177.6
C15 C19 H191 C18 241.4 240.2
H191 C19 C15 H15 296.6 57.7
C15 C19 H191 H192 120.7 120.0
H191 C19 C18 N2 302.1 180.9
C18 C19 H191 H192 239.3 239.8
H191 C19 C18 H181 62.4 300.9
H191 C19 C18 H182 181.8 60.8
H192 C19 C15 C16 173.0 297.7
C15 C19 H192 C18 118.6 119.8
H192 C19 C15 H15 57.1 177.7
C15 C19 H192 H191 239.3 239.9
H192 C19 C18 N2 181.6 60.7
C18 C19 H192 H191 120.7 120.2
H192 C19 C18 H181 301.9 180.8
H192 C19 C18 H182 61.3 300.7
C15 C16 H161 C17 238.3 240.3
H161 C16 C15 H15 296.2 182.2
C15 C16 H161 H162 119.2 120.1
C17 C16 H161 H162 240.9 239.9
H161 C16 C17 H171 72.3 179.2
H161 C16 C17 H172 313.7 59.3
C15 C16 H162 C17 121.7 119.8
H162 C16 C15 H15 55.7 302.3
C15 C16 H162 H161 240.8 239.9
C17 C16 H162 H161 119.1 120.1
H162 C16 C17 H171 312.9 59.1
H162 C16 C17 H172 194.3 299.1
C19 C18 H181 N2 238.3 239.9
H181 C18 C19 H191 62.4 300.9
H181 C18 C19 H192 301.9 180.8
C19 C18 H181 H182 119.2 119.9
H181 C18 N2 C17 191.6 301.7
N2 C18 H181 H182 240.9 240.0
H181 C18 N2 H2 312.5 65.8
C19 C18 H182 N2 121.7 120.1
H182 C18 C19 H191 181.8 60.8
H182 C18 C19 H192 61.3 300.7
C19 C18 H182 H181 240.8 240.1
H182 C18 N2 C17 72.2 181.8
N2 C18 H182 H181 119.1 120.0
H182 C18 N2 H2 193.1 305.8
C18 N2 H2 C17 234.5 235.8
H2 N2 C18 H181 312.5 65.8
H2 N2 C18 H182 193.1 305.8
H2 N2 C17 C16 279.7 174.2
H2 N2 C17 H171 40.5 294.2
H2 N2 C17 H172 159.1 54.2
N2 C17 H171 C16 235.8 239.9
H171 C17 N2 H2 40.5 294.2
N2 C17 H171 H172 117.9 120.0
H171 C17 C16 H161 72.3 179.2
H171 C17 C16 H162 312.9 59.1
C16 C17 H171 H172 242.1 240.0
N2 C17 H172 C16 124.2 120.1
H172 C17 N2 H2 159.1 54.2
N2 C17 H172 H171 242.1 240.0
H172 C17 C16 H161 313.7 59.3
H172 C17 C16 H162 194.3 299.1
C16 C17 H172 H171 117.9 120.0
C8 N1 H1 C7 180.0 180.0
H1 N1 C7 C6 6.3 0.0
H N C7 N1 184.1 180.1
H N C7 C6 360.0 0.1
C7 C6 H61C C5 241.8 240.1
C7 C6 H61C H62C 120.9 120.1
H61C C6 C5 C4 310.9 330.1
H61C C6 C5 C20 132.7 149.7
C5 C6 H61C H62C 239.1 240.0
C7 C6 H62C C5 118.2 119.9
C7 C6 H62C H61C 239.1 239.9
H62C C6 C5 C4 190.3 210.1
H62C C6 C5 C20 12.1 29.7
C5 C6 H62C H61C 120.9 120.0
H4 C4 C5 C20 178.4 180.3
C5 C4 H4 C3 180.0 180.1
H4 C4 C3 C2 181.4 180.0
H4 C4 C3 H3 1.4 0.0
C5 C20 H20 C1 180.0 179.8
H20 C20 C1 O 0.5 0.1
C4 C3 H3 C2 180.0 180.0
H3 C3 C4 H4 1.4 0.0
H3 C3 C2 C1 178.6 180.0
H3 C3 C2 HA 358.6 360.0
C3 C2 HA C1 180.0 180.0
HA C2 C3 H3 358.6 360.0
HA C2 C1 C20 181.6 179.8
HA C2 C1 O 359.3 360.0
O C HC1 HC2 120.0 120.0
O C HC1 HC3 240.0 240.0
HC2 C HC1 HC3 120.0 120.1
O C HC2 HC1 240.0 240.0
O C HC2 HC3 120.0 120.0
HC1 C HC2 HC3 240.0 239.9
O C HC3 HC1 120.0 120.0
O C HC3 HC2 240.0 240.1
HC1 C HC3 HC2 120.0 120.1