Atom Nomenclature for 7WI

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 7WI

Atom Name (V3) Atom Name (V2)
C1 C1
C2 C2
N3 N3
C4 C4
C5 C5
C6 C6
C7 C7
C8 C8
CL9 CL9
N10 N10
O11 O11
C12 C12
C13 C13
O14 O14
C15 C15
H2 H2
H3 H3
H4 H4
H7 H7
H8 H8
H10 H10
H121 H121
H122 H122
H131 H131
H132 H132
H151 H151
H152 H152
H153 H153