PDB Chemical Component 7VA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 7VA
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O27 |
C28 |
1.400 |
1.429 |
O27 |
C23 |
1.402 |
1.360 |
C23 |
C22 |
1.393 |
1.384 |
C23 |
C24 |
1.399 |
1.391 |
C22 |
C19 |
1.421 |
1.387 |
C24 |
C25 |
1.393 |
1.366 |
C26 |
N18 |
1.452 |
1.465 |
C19 |
N18 |
1.364 |
1.381 |
C19 |
C20 |
1.371 |
1.405 |
N18 |
C17 |
1.325 |
1.361 |
C25 |
C20 |
1.423 |
1.398 |
C20 |
N21 |
1.364 |
1.358 |
C17 |
N21 |
1.325 |
1.301 |
C17 |
C16 |
1.529 |
1.506 |
C16 |
O15 |
1.401 |
1.429 |
O15 |
C12 |
1.406 |
1.359 |
C12 |
C11 |
1.389 |
1.388 |
C12 |
C13 |
1.386 |
1.388 |
C11 |
C10 |
1.390 |
1.381 |
C13 |
C14 |
1.387 |
1.381 |
C10 |
C09 |
1.388 |
1.382 |
C14 |
C09 |
1.386 |
1.382 |
C09 |
C08 |
1.533 |
1.508 |
S04 |
C03 |
1.679 |
1.825 |
S04 |
C05 |
1.628 |
1.773 |
C08 |
C03 |
1.531 |
1.530 |
C03 |
C02 |
1.462 |
1.514 |
O06 |
C05 |
1.183 |
1.216 |
C05 |
N01 |
1.321 |
1.334 |
C02 |
N01 |
1.411 |
1.322 |
C02 |
O07 |
1.184 |
1.212 |
C10 |
H1 |
1.080 |
1.080 |
C13 |
H2 |
1.080 |
1.079 |
C22 |
H3 |
1.080 |
1.080 |
C24 |
H4 |
1.080 |
1.080 |
C26 |
H5 |
1.100 |
1.091 |
C26 |
H6 |
1.100 |
1.090 |
C26 |
H7 |
1.100 |
1.090 |
C28 |
H8 |
1.100 |
1.090 |
C28 |
H9 |
1.100 |
1.090 |
C28 |
H10 |
1.100 |
1.089 |
N01 |
H11 |
1.000 |
0.970 |
C08 |
H12 |
1.100 |
1.089 |
C08 |
H13 |
1.100 |
1.090 |
C11 |
H14 |
1.080 |
1.080 |
C14 |
H15 |
1.080 |
1.080 |
C16 |
H16 |
1.100 |
1.091 |
C16 |
H17 |
1.100 |
1.090 |
C25 |
H18 |
1.080 |
1.079 |
C03 |
H19 |
1.100 |
1.090 |
Bond Angles for 7VA
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O27 |
C28 |
H8 |
109.5 |
109.5 |
O27 |
C28 |
H9 |
109.5 |
109.5 |
O27 |
C28 |
H10 |
109.4 |
109.5 |
C23 |
C22 |
H3 |
120.0 |
120.2 |
C23 |
C24 |
C25 |
120.0 |
120.6 |
C23 |
C24 |
H4 |
120.0 |
119.7 |
C22 |
C19 |
N18 |
133.4 |
134.1 |
C19 |
C22 |
H3 |
120.0 |
120.1 |
C25 |
C24 |
H4 |
120.0 |
119.7 |
C24 |
C25 |
H18 |
120.1 |
120.0 |
N18 |
C26 |
H5 |
109.5 |
109.5 |
N18 |
C26 |
H6 |
109.5 |
109.5 |
N18 |
C26 |
H7 |
109.4 |
109.5 |
C19 |
C20 |
N21 |
107.2 |
107.0 |
N18 |
C17 |
N21 |
109.5 |
110.1 |
C17 |
N21 |
C20 |
108.2 |
109.6 |
C16 |
C17 |
N21 |
125.1 |
124.9 |
C17 |
C16 |
O15 |
107.3 |
109.5 |
C17 |
C16 |
H16 |
110.0 |
109.5 |
C17 |
C16 |
H17 |
110.0 |
109.5 |
C12 |
C11 |
H14 |
120.0 |
120.0 |
C12 |
C13 |
C14 |
120.3 |
119.9 |
C12 |
C13 |
H2 |
119.9 |
120.1 |
C11 |
C10 |
H1 |
119.9 |
120.0 |
C13 |
C14 |
C09 |
120.2 |
120.1 |
C14 |
C13 |
H2 |
119.8 |
120.0 |
C13 |
C14 |
H15 |
119.9 |
119.9 |
C10 |
C09 |
C08 |
120.4 |
119.9 |
C09 |
C10 |
H1 |
119.9 |
120.0 |
C09 |
C08 |
H12 |
108.6 |
109.5 |
C09 |
C08 |
H13 |
108.6 |
109.4 |
S04 |
C03 |
H19 |
90.2 |
110.7 |
C08 |
C03 |
H19 |
90.2 |
110.7 |
C03 |
C02 |
O07 |
125.3 |
123.1 |
C05 |
N01 |
H11 |
121.9 |
119.4 |
C02 |
N01 |
H11 |
121.8 |
119.3 |
H5 |
C26 |
H6 |
109.5 |
109.4 |
H5 |
C26 |
H7 |
109.5 |
109.5 |
H6 |
C26 |
H7 |
109.5 |
109.5 |
H8 |
C28 |
H9 |
109.5 |
109.5 |
H8 |
C28 |
H10 |
109.5 |
109.5 |
H9 |
C28 |
H10 |
109.5 |
109.4 |
H12 |
C08 |
H13 |
109.5 |
109.5 |
H16 |
C16 |
H17 |
109.4 |
109.4 |
Torsion Angles for 7VA
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H8 |
C28 |
O27 |
H9 |
240.0 |
240.0 |
H8 |
C28 |
O27 |
H10 |
120.0 |
120.0 |
H9 |
C28 |
O27 |
H10 |
240.0 |
240.0 |
C23 |
O27 |
C28 |
H8 |
180.0 |
300.0 |
C23 |
O27 |
C28 |
H9 |
300.0 |
60.0 |
C23 |
O27 |
C28 |
H10 |
60.0 |
180.0 |
O27 |
C23 |
C22 |
H3 |
0.0 |
0.1 |
O27 |
C23 |
C24 |
H4 |
0.0 |
360.0 |
C19 |
C22 |
C23 |
H3 |
180.0 |
179.9 |
C24 |
C23 |
C22 |
H3 |
180.0 |
180.1 |
C25 |
C24 |
C23 |
H4 |
180.0 |
180.0 |
C23 |
C24 |
C25 |
H18 |
179.9 |
180.0 |
C23 |
C22 |
C19 |
H3 |
180.0 |
180.1 |
C22 |
C19 |
C20 |
N21 |
180.0 |
180.0 |
C23 |
C24 |
C25 |
H4 |
180.0 |
180.0 |
C22 |
C19 |
N18 |
C26 |
360.0 |
0.1 |
C26 |
N18 |
C17 |
N21 |
180.1 |
180.0 |
H5 |
C26 |
N18 |
H6 |
240.0 |
240.0 |
H5 |
C26 |
N18 |
H7 |
120.0 |
120.0 |
H6 |
C26 |
N18 |
H7 |
240.0 |
240.0 |
N18 |
C19 |
C22 |
H3 |
360.0 |
359.9 |
C19 |
N18 |
C26 |
H5 |
180.0 |
269.9 |
C19 |
N18 |
C26 |
H6 |
300.0 |
29.9 |
C19 |
N18 |
C26 |
H7 |
60.0 |
149.9 |
N18 |
C19 |
C20 |
N21 |
360.0 |
0.0 |
C19 |
N18 |
C17 |
N21 |
0.0 |
0.1 |
C17 |
N21 |
C20 |
C19 |
0.0 |
0.0 |
N18 |
C17 |
N21 |
C20 |
360.0 |
360.0 |
C16 |
C17 |
N18 |
N21 |
180.2 |
179.7 |
N18 |
C17 |
C16 |
H16 |
278.5 |
30.3 |
N18 |
C17 |
C16 |
H17 |
39.1 |
150.3 |
C16 |
C17 |
N21 |
C20 |
179.8 |
180.3 |
C19 |
C20 |
N21 |
C17 |
0.0 |
0.0 |
N21 |
C17 |
C16 |
O15 |
339.0 |
90.0 |
N21 |
C17 |
C16 |
H16 |
98.7 |
210.0 |
N21 |
C17 |
C16 |
H17 |
219.3 |
329.9 |
N18 |
C17 |
C16 |
N21 |
179.8 |
180.3 |
H16 |
C16 |
C17 |
H17 |
239.4 |
240.1 |
O15 |
C16 |
C17 |
N21 |
339.0 |
90.0 |
C17 |
C16 |
O15 |
H16 |
119.7 |
120.0 |
C17 |
C16 |
O15 |
H17 |
240.3 |
239.9 |
C17 |
C16 |
O15 |
C12 |
248.2 |
180.0 |
O15 |
C12 |
C11 |
H14 |
0.2 |
360.0 |
O15 |
C12 |
C13 |
H2 |
359.8 |
0.2 |
C11 |
C12 |
C13 |
C14 |
0.1 |
359.7 |
C11 |
C12 |
C13 |
H2 |
180.0 |
180.2 |
C12 |
C11 |
C10 |
H1 |
179.8 |
180.2 |
C12 |
C13 |
C14 |
C09 |
0.2 |
0.5 |
C14 |
C13 |
C12 |
H2 |
180.0 |
179.5 |
C12 |
C13 |
C14 |
H15 |
180.3 |
180.0 |
C09 |
C10 |
C11 |
H1 |
180.0 |
179.8 |
C12 |
C13 |
C14 |
H2 |
180.0 |
180.5 |
C11 |
C10 |
C09 |
H1 |
180.0 |
180.2 |
C13 |
C14 |
C09 |
C10 |
359.5 |
359.5 |
C10 |
C09 |
C08 |
H12 |
211.2 |
330.0 |
C10 |
C09 |
C08 |
H13 |
330.2 |
209.9 |
C09 |
C14 |
C13 |
H2 |
180.3 |
180.0 |
C13 |
C14 |
C09 |
H15 |
180.0 |
179.5 |
C14 |
C09 |
C10 |
H1 |
180.5 |
180.0 |
C14 |
C09 |
C08 |
H12 |
30.2 |
150.0 |
C14 |
C09 |
C08 |
H13 |
149.2 |
30.0 |
C13 |
C14 |
C09 |
C08 |
180.4 |
179.5 |
C08 |
C09 |
C10 |
H1 |
359.5 |
0.1 |
C09 |
C08 |
C03 |
H19 |
40.8 |
51.8 |
H12 |
C08 |
C09 |
H13 |
241.0 |
120.0 |
C08 |
C03 |
S04 |
H19 |
90.4 |
123.2 |
S04 |
C03 |
C02 |
O07 |
180.2 |
180.0 |
C05 |
S04 |
C03 |
H19 |
90.0 |
118.2 |
S04 |
C05 |
N01 |
H11 |
179.9 |
179.9 |
C10 |
C09 |
C08 |
C03 |
90.7 |
90.0 |
S04 |
C03 |
C08 |
H19 |
269.6 |
236.8 |
C03 |
C02 |
N01 |
H11 |
179.9 |
180.0 |
O06 |
C05 |
N01 |
H11 |
359.9 |
0.2 |
C02 |
N01 |
C05 |
H11 |
180.0 |
179.7 |
C05 |
N01 |
C02 |
H11 |
180.0 |
180.3 |
O07 |
C02 |
N01 |
H11 |
0.0 |
359.9 |
H1 |
C10 |
C09 |
C08 |
359.5 |
0.1 |
C12 |
C13 |
H2 |
C14 |
180.0 |
179.5 |
H2 |
C13 |
C14 |
C09 |
180.3 |
180.0 |
H2 |
C13 |
C14 |
H15 |
0.3 |
359.5 |
H3 |
C22 |
C19 |
N18 |
360.0 |
359.9 |
C23 |
C24 |
H4 |
C25 |
180.0 |
180.0 |
H4 |
C24 |
C25 |
H18 |
359.9 |
0.1 |
N18 |
C26 |
H5 |
H6 |
120.0 |
120.0 |
N18 |
C26 |
H5 |
H7 |
240.0 |
240.0 |
H6 |
C26 |
H5 |
H7 |
120.0 |
120.0 |
N18 |
C26 |
H6 |
H5 |
240.0 |
240.0 |
N18 |
C26 |
H6 |
H7 |
120.0 |
120.0 |
H5 |
C26 |
H6 |
H7 |
240.0 |
240.0 |
N18 |
C26 |
H7 |
H5 |
120.0 |
120.0 |
N18 |
C26 |
H7 |
H6 |
240.0 |
239.9 |
H5 |
C26 |
H7 |
H6 |
120.0 |
120.0 |
O27 |
C28 |
H8 |
H9 |
120.0 |
120.0 |
O27 |
C28 |
H8 |
H10 |
240.0 |
240.0 |
H9 |
C28 |
H8 |
H10 |
120.0 |
120.0 |
O27 |
C28 |
H9 |
H8 |
240.0 |
240.0 |
O27 |
C28 |
H9 |
H10 |
120.0 |
120.0 |
H8 |
C28 |
H9 |
H10 |
240.0 |
240.0 |
O27 |
C28 |
H10 |
H8 |
120.0 |
120.0 |
O27 |
C28 |
H10 |
H9 |
240.0 |
240.0 |
H8 |
C28 |
H10 |
H9 |
120.0 |
120.0 |
C09 |
C08 |
H12 |
H13 |
118.5 |
240.0 |
H12 |
C08 |
C03 |
H19 |
280.3 |
171.9 |
C09 |
C08 |
H13 |
H12 |
241.5 |
120.0 |
H13 |
C08 |
C03 |
H19 |
161.2 |
291.9 |
H14 |
C11 |
C10 |
H1 |
359.8 |
0.2 |
C13 |
C14 |
H15 |
C09 |
180.0 |
180.5 |
H15 |
C14 |
C13 |
H2 |
0.3 |
359.5 |
H16 |
C16 |
C17 |
N21 |
98.7 |
210.0 |
C17 |
C16 |
H16 |
O15 |
242.0 |
240.0 |
C17 |
C16 |
H16 |
H17 |
121.0 |
120.0 |
H17 |
C16 |
C17 |
N21 |
219.3 |
329.9 |
C17 |
C16 |
H17 |
O15 |
118.0 |
120.0 |
C17 |
C16 |
H17 |
H16 |
239.0 |
240.0 |
H18 |
C25 |
C24 |
H4 |
359.9 |
0.1 |
H19 |
C03 |
C02 |
O07 |
89.9 |
61.7 |