PDB Chemical Component 7SY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7SY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C22 C23 1.529 1.531
C22 C13 1.536 1.530
O1 C12 1.246 1.208
C23 C13 1.527 1.529
C13 N 1.472 1.465
C12 O2 1.250 1.342
C12 C11 1.509 1.507
C2 C3 1.388 1.383
C2 C1 1.387 1.382
C3 C4 1.388 1.382
C1 C 1.393 1.387
C4 C5 1.391 1.381
N C6 1.460 1.465
N C14 1.331 1.348
C C5 1.384 1.388
C O 1.370 1.359
C11 C10 1.521 1.529
C5 C6 1.514 1.508
O3 C14 1.218 1.216
C9 C10 1.522 1.530
C9 C8 1.522 1.529
O C7 1.424 1.429
C14 C15 1.502 1.477
C7 C8 1.522 1.530
C15 C16 1.385 1.398
C15 C17 1.381 1.397
C16 C20 1.393 1.376
C17 C18 1.390 1.376
C20 C19 1.397 1.394
C18 C19 1.394 1.395
C19 C21 1.507 1.483
C21 C24 1.394 1.393
C21 C25 1.394 1.394
C24 C28 1.388 1.383
C25 C26 1.388 1.379
C28 F 1.344 1.351
C28 C27 1.383 1.385
C26 C27 1.382 1.383
C4 H3 1.079 1.080
C6 H4 1.100 1.090
C6 H5 1.100 1.090
C7 H7 1.100 1.090
C7 H6 1.100 1.090
C8 H8 1.100 1.090
C8 H9 1.100 1.090
C10 H12 1.100 1.090
C10 H13 1.100 1.089
C13 H16 1.100 1.090
C17 H18 1.080 1.080
C20 H20 1.080 1.080
C22 H21 1.100 1.090
C22 H22 1.100 1.090
C24 H25 1.080 1.081
C26 H27 1.080 1.080
C27 H28 1.080 1.080
C25 H26 1.080 1.081
C16 H17 1.080 1.080
C18 H19 1.080 1.080
C23 H23 1.100 1.090
C23 H24 1.100 1.090
C3 H2 1.080 1.080
C2 H1 1.079 1.079
C1 H 1.080 1.080
C9 H10 1.100 1.090
C9 H11 1.100 1.091
C11 H15 1.100 1.090
C11 H14 1.100 1.090
O2 H29 0.951 0.967

Bond Angles for 7SY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C23 C22 H21 120.0 117.5
C23 C22 H22 120.0 117.5
C22 C23 H23 120.0 117.5
C22 C23 H24 120.0 117.5
C22 C13 N 121.3 117.5
C22 C13 H16 117.2 117.5
O1 C12 O2 122.5 120.0
C23 C13 H16 117.3 117.5
C13 N C14 116.6 120.0
N C13 H16 118.5 115.5
C12 O2 H29 109.5 117.0
C12 C11 H15 109.6 109.4
C12 C11 H14 109.6 109.5
C2 C3 H2 120.0 119.9
C2 C1 C 120.0 119.9
C1 C2 H1 120.0 120.0
C2 C1 H 120.0 120.0
C3 C4 H3 120.0 120.0
C1 C O 121.0 120.0
C C1 H 120.0 120.1
C4 C5 C6 120.6 120.0
C5 C4 H3 120.0 120.0
N C6 H4 108.9 109.5
N C6 H5 108.9 109.4
C11 C10 H12 109.1 109.4
C11 C10 H13 109.1 109.5
C5 C6 H4 108.9 109.4
C5 C6 H5 108.9 109.5
C9 C10 H12 109.1 109.5
C9 C10 H13 109.1 109.5
C9 C8 H8 109.1 109.5
C9 C8 H9 109.1 109.5
O C7 H7 109.4 109.5
O C7 H6 109.4 109.4
C8 C7 H7 109.4 109.5
C8 C7 H6 109.4 109.5
C7 C8 H8 109.1 109.5
C7 C8 H9 109.0 109.5
C17 C15 C16 119.1 119.9
C15 C16 C20 120.2 119.9
C15 C16 H17 119.9 120.0
C15 C17 C18 120.8 120.0
C15 C17 H18 119.6 120.0
C16 C20 H20 119.3 119.9
C17 C18 C19 121.0 120.0
C18 C17 H18 119.6 120.0
C17 C18 H19 119.5 120.0
C20 C19 C21 121.3 120.0
C19 C20 H20 119.3 120.0
C24 C21 C25 117.5 119.8
C21 C24 C28 121.2 119.9
C21 C24 H25 119.4 120.1
C21 C25 C26 121.5 119.9
C21 C25 H26 119.3 120.0
C24 C28 F 119.8 120.0
C24 C28 C27 120.2 120.1
C28 C24 H25 119.4 120.1
C25 C26 H27 120.0 119.9
F C28 C27 120.0 120.0
C26 C27 C28 119.5 120.2
C28 C27 H28 120.2 119.9
C27 C26 H27 120.0 119.9
C26 C27 H28 120.2 119.9
H4 C6 H5 109.4 109.5
H7 C7 H6 109.5 109.4
H8 C8 H9 109.5 109.4
H12 C10 H13 109.5 109.5
H21 C22 H22 109.5 115.6
H23 C23 H24 109.4 115.5
H10 C9 H11 109.5 109.4
H15 C11 H14 109.5 109.5

Torsion Angles for 7SY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C23 C22 C13 N 92.7 107.5
C23 C22 C13 H16 252.6 252.5
C22 C23 C13 H16 107.2 107.5
H21 C22 C23 H22 218.8 145.0
H23 C23 C22 H24 219.1 145.0
C23 C13 C22 H16 107.4 107.5
C22 C13 N C14 188.4 307.9
N C13 C22 H16 200.1 215.1
O1 C12 O2 H29 360.0 360.0
O1 C12 C11 H15 31.3 245.1
O1 C12 C11 H14 151.4 125.1
C22 C13 C23 H16 252.8 252.5
N C13 C23 H16 136.1 145.0
C22 C13 N H16 159.7 145.6
C23 C13 N H16 224.5 214.3
C13 N C6 H4 193.1 286.0
C13 N C6 H5 312.4 165.9
O2 C12 C11 H15 210.5 65.0
O2 C12 C11 H14 330.7 305.0
C12 C11 C10 H12 207.1 65.0
C12 C11 C10 H13 326.6 305.0
H15 C11 C12 H14 239.8 120.0
C2 C3 C4 H3 179.9 180.3
C1 C2 C3 H2 179.9 180.0
C2 C1 C O 180.1 180.0
C C1 C2 H 180.0 179.7
C5 C4 C3 H3 180.0 179.8
C C1 C2 H1 179.8 179.7
C2 C1 C H 180.0 180.3
C3 C4 C5 H3 180.0 180.2
C4 C5 C6 H4 262.9 359.9
C4 C5 C6 H5 143.6 120.0
C5 C6 N H4 239.7 120.0
C5 C6 N H5 120.3 240.0
H4 C6 N H5 240.7 120.1
C14 N C13 H16 28.7 162.3
C14 N C6 H4 13.5 106.0
C14 N C6 H5 132.8 345.9
C C5 C4 H3 180.4 180.0
C C5 C6 H4 82.1 180.0
C C5 C6 H5 322.8 300.1
O C C1 H 0.1 359.6
C O C7 H7 288.3 56.3
C O C7 H6 48.2 296.4
C9 C10 C11 H12 239.8 120.0
C9 C10 C11 H13 120.2 239.9
H12 C10 C11 H13 240.4 120.0
C6 C5 C4 H3 359.6 0.1
N C6 C5 H4 120.4 240.0
N C6 C5 H5 239.7 120.0
H4 C6 C5 H5 119.3 239.9
C13 N C14 O3 3.8 5.4
C11 C10 C9 H12 120.2 240.0
C11 C10 C9 H13 239.8 120.1
C10 C9 C8 H8 295.4 65.0
C10 C9 C8 H9 54.9 305.0
H12 C10 C9 H13 119.6 240.0
C9 C8 C7 H7 299.2 305.0
C9 C8 C7 H6 179.3 65.0
C7 C8 C9 H8 239.7 120.0
C7 C8 C9 H9 120.2 240.0
H8 C8 C9 H9 240.5 120.0
C8 C7 O H7 239.9 120.0
C8 C7 O H6 120.1 240.0
O C7 C8 H8 299.0 305.0
O C7 C8 H9 179.5 65.0
H7 C7 O H6 240.1 119.9
C13 N C14 C15 183.5 185.4
C14 C15 C16 H17 359.3 0.2
C14 C15 C17 H18 0.9 359.7
C9 C8 C7 H8 120.3 240.0
C9 C8 C7 H9 239.7 120.0
O C7 C8 H7 120.1 240.0
O C7 C8 H6 240.0 120.0
H7 C7 C8 H6 119.9 240.0
H8 C8 C7 H9 119.5 240.1
C16 C15 C17 C18 359.6 360.0
C16 C15 C17 H18 179.6 180.0
C15 C16 C20 H20 179.8 180.0
C17 C15 C16 C20 0.6 0.0
C17 C15 C16 H17 180.7 179.9
C15 C17 C18 C19 359.8 0.1
C18 C17 C15 H18 180.0 179.9
C15 C17 C18 H19 179.7 180.0
C15 C16 C20 H17 180.0 179.9
C19 C20 C16 H20 180.0 179.9
C18 C17 C15 C16 359.6 360.0
C15 C17 C18 H18 180.0 180.1
C15 C16 C20 C19 359.8 359.9
C16 C20 C19 H20 180.0 180.1
C17 C18 C19 C20 0.7 359.9
C19 C18 C17 H18 179.7 180.0
C17 C18 C19 H19 180.0 179.9
C18 C19 C20 H20 179.5 180.0
C17 C18 C19 C21 179.5 179.9
C21 C19 C20 H20 0.7 360.0
C19 C21 C24 H25 359.4 359.7
C19 C21 C25 H26 0.5 0.3
C20 C19 C21 C24 350.8 185.1
C24 C21 C25 C26 359.4 0.0
C24 C21 C25 H26 179.4 180.0
C21 C24 C28 F 179.8 180.0
C21 C24 C28 C27 359.7 360.0
C28 C24 C21 H25 180.0 180.1
C20 C19 C21 C25 169.6 4.9
C25 C21 C24 C28 0.6 0.0
C25 C21 C24 H25 180.6 180.0
C21 C25 C26 H27 180.3 180.0
C28 C24 C21 C25 0.6 0.0
C21 C24 C28 H25 180.0 179.9
F C28 C24 C27 180.0 180.1
C26 C27 C28 C24 359.9 0.0
C24 C28 C27 H28 179.9 180.1
C21 C25 C26 H26 180.0 180.0
C27 C26 C25 H27 180.0 180.0
C25 C26 C27 H28 180.0 179.9
C24 C28 F C27 180.0 179.9
F C28 C24 H25 359.8 0.1
C26 C27 C28 F 179.9 179.9
F C28 C27 H28 359.9 0.0
C24 C28 C27 F 180.0 180.1
C27 C28 C24 H25 179.8 180.0
C28 C27 C26 H27 180.0 180.0
C26 C27 C28 H28 180.0 179.9
C21 C25 C26 C27 0.3 360.0
C24 C28 C27 C26 359.9 0.0
C25 C26 C27 H27 180.0 180.0
F C28 C27 C26 179.9 179.9
C28 C27 C26 H28 180.0 180.1
H3 C4 C5 C6 359.6 0.1
N C6 H4 H5 119.0 240.0
C5 C6 H4 H5 241.1 120.0
N C6 H5 H4 241.0 120.0
C5 C6 H5 H4 118.9 240.0
O C7 H7 H6 119.8 240.1
C8 C7 H7 H6 240.1 120.1
H7 C7 C8 H8 178.9 65.0
H7 C7 C8 H9 59.4 185.0
O C7 H6 H7 240.2 119.9
C8 C7 H6 H7 119.9 240.0
H6 C7 C8 H8 59.0 185.0
H6 C7 C8 H9 299.5 305.0
C9 C8 H8 H9 119.3 240.0
H8 C8 C7 H7 178.9 65.0
H8 C8 C7 H6 59.0 185.0
C7 C8 H8 H9 240.8 120.0
C9 C8 H9 H8 240.7 120.0
H9 C8 C7 H7 59.4 185.0
H9 C8 C7 H6 299.5 305.0
C7 C8 H9 H8 119.2 240.0
C11 C10 H12 H13 119.3 240.0
C9 C10 H12 H13 240.7 120.0
C11 C10 H13 H12 240.7 120.0
C9 C10 H13 H12 119.3 240.0
C22 C13 H16 N 199.5 214.4
H16 C13 N C14 28.7 162.3
H18 C17 C15 C16 179.6 180.0
C15 C17 H18 C18 180.0 179.9
H18 C17 C18 C19 179.7 180.0
H18 C17 C18 H19 359.7 360.0
H20 C20 C19 C21 0.7 360.0
C23 C22 H21 H22 144.8 214.3
H21 C22 C23 H23 219.0 145.0
H21 C22 C23 H24 359.9 0.1
H21 C22 C13 N 343.3 215.0
H21 C22 C13 H16 143.2 359.9
C23 C22 H22 H21 215.2 145.7
H22 C22 C23 H23 0.1 0.0
H22 C22 C23 H24 141.0 215.0
H22 C22 C13 N 202.1 0.1
H22 C22 C13 H16 2.0 145.0
H25 C24 C21 C25 180.6 180.0
C21 C24 H25 C28 180.0 180.1
H25 C24 C28 F 359.8 0.1
H25 C24 C28 C27 179.8 180.0
H27 C26 C27 C28 180.0 180.0
H27 C26 C27 H28 0.0 359.9
C26 C27 H28 C28 180.0 180.1
H28 C27 C26 H27 0.0 359.9
C21 C25 H26 C26 180.0 180.0
H26 C25 C26 H27 0.3 0.0
C15 C16 H17 C20 180.0 180.1
H17 C16 C20 H20 359.8 0.1
C17 C18 H19 C19 180.0 180.1
H19 C18 C17 H18 359.7 360.0
H23 C23 C22 H21 219.0 145.0
H23 C23 C22 H22 0.1 0.0
C22 C23 H23 H24 144.6 214.3
H23 C23 C13 H16 357.6 215.0
H24 C23 C22 H21 359.9 0.1
H24 C23 C22 H22 141.0 215.0
C22 C23 H24 H23 215.4 145.6
H24 C23 C13 H16 216.8 0.0
H2 C3 C4 H3 360.0 0.2
H1 C2 C3 H2 359.9 360.0
H1 C2 C1 C 179.8 179.7
H1 C2 C1 H 359.8 0.1
C2 C1 H C 180.0 179.7
H C1 C2 H1 359.8 0.1
H C1 C O 0.1 359.6
H10 C9 C10 H12 175.5 185.0
H10 C9 C10 H13 56.0 304.9
H10 C9 C8 H8 175.4 185.0
H10 C9 C8 H9 294.9 65.0
H11 C9 C10 H12 295.4 65.0
H11 C9 C10 H13 175.9 185.0
H11 C9 C8 H8 55.5 304.9
H11 C9 C8 H9 175.0 185.0
C12 C11 H15 H14 120.2 240.0
H15 C11 C10 H12 87.2 184.9
H15 C11 C10 H13 206.7 65.0
C12 C11 H14 H15 239.8 120.0
H14 C11 C10 H12 327.0 304.9
H14 C11 C10 H13 86.6 185.0