PDB Chemical Component 7PY

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7PY

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
CAX OAW 1.429 1.429
CAX HAX1 1.100 1.090
CAX HAX2 1.100 1.090
CAX HAX3 1.100 1.090
OAW CAS 1.362 1.360
CAS CAR 1.394 1.387
CAS CAT 1.394 1.389
CAR CAF 1.393 1.388
CAR HAR 1.080 1.080
CAT OAY 1.362 1.361
CAT CAU 1.393 1.390
OAY CAZ 1.429 1.429
CAZ HAZ1 1.100 1.090
CAZ HAZ2 1.100 1.090
CAZ HAZ3 1.100 1.090
CAU OBA 1.360 1.360
CAU CAV 1.393 1.386
OBA CBB 1.431 1.430
CBB HBB1 1.100 1.090
CBB HBB2 1.100 1.090
CBB HBB3 1.100 1.090
CAV CAF 1.392 1.388
CAV HAV 1.080 1.080
CAF NAE 1.334 1.400
NAE CAD 1.332 1.386
NAE HAE 1.000 0.969
CAD NAG 1.400 1.323
CAD NAC 1.401 1.327
NAG CAH 1.401 1.328
CAH CAA 1.393 1.411
CAH NAI 1.332 1.371
NAC CAB 1.401 1.322
CAB CAA 1.390 1.393
CAB HAB 1.080 1.081
CAA CAL 1.331 1.464
CAL CAK 1.328 1.342
CAL HAL 1.080 1.080
CAK NAI 1.329 1.375
CAK HAK 1.080 1.080
NAI CAJ 1.331 1.396
CAJ CAM 1.392 1.391
CAJ NAQ 1.403 1.322
CAM CAN 1.392 1.384
CAM HAM 1.080 1.080
CAN CAO 1.390 1.388
CAN HAN 1.081 1.080
CAO CAP 1.390 1.381
CAO HAO 1.080 1.080
CAP NAQ 1.402 1.320
CAP HAP 1.080 1.080

Bond Angles for 7PY

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
OAW CAX HAX1 109.5 109.5
OAW CAX HAX2 109.5 109.5
OAW CAX HAX3 109.5 109.5
CAX OAW CAS 112.4 106.8
HAX1 CAX HAX2 109.5 109.5
HAX1 CAX HAX3 109.5 109.5
HAX2 CAX HAX3 109.4 109.4
OAW CAS CAR 119.3 120.0
OAW CAS CAT 119.9 120.0
CAR CAS CAT 120.0 120.0
CAS CAR CAF 120.7 120.0
CAS CAR HAR 119.7 120.0
CAS CAT OAY 120.5 120.0
CAS CAT CAU 119.7 119.9
CAF CAR HAR 119.7 120.0
CAR CAF CAV 118.8 120.0
CAR CAF NAE 123.6 120.0
OAY CAT CAU 119.6 120.0
CAT OAY CAZ 111.7 106.8
CAT CAU OBA 120.7 120.0
CAT CAU CAV 119.8 120.0
OAY CAZ HAZ1 109.4 109.5
OAY CAZ HAZ2 109.5 109.4
OAY CAZ HAZ3 109.5 109.5
HAZ1 CAZ HAZ2 109.5 109.5
HAZ1 CAZ HAZ3 109.5 109.5
HAZ2 CAZ HAZ3 109.4 109.4
OBA CAU CAV 119.4 120.0
CAU OBA CBB 111.3 106.8
CAU CAV CAF 121.0 120.0
CAU CAV HAV 119.5 120.0
OBA CBB HBB1 109.5 109.5
OBA CBB HBB2 109.5 109.5
OBA CBB HBB3 109.5 109.5
HBB1 CBB HBB2 109.4 109.4
HBB1 CBB HBB3 109.5 109.5
HBB2 CBB HBB3 109.5 109.5
CAF CAV HAV 119.5 120.0
CAV CAF NAE 116.8 120.0
CAF NAE CAD 127.1 120.0
CAF NAE HAE 116.5 120.0
CAD NAE HAE 116.5 120.1
NAE CAD NAG 119.8 118.8
NAE CAD NAC 119.4 118.8
NAG CAD NAC 118.9 122.4
CAD NAG CAH 119.9 120.4
CAD NAC CAB 120.9 121.1
NAG CAH CAA 120.7 118.6
NAG CAH NAI 132.5 134.3
CAA CAH NAI 106.8 107.1
CAH CAA CAB 119.8 118.8
CAH CAA CAL 106.1 106.2
CAH NAI CAK 109.3 109.9
CAH NAI CAJ 130.2 125.0
NAC CAB CAA 119.7 118.6
NAC CAB HAB 120.1 120.7
CAA CAB HAB 120.1 120.7
CAB CAA CAL 134.1 135.0
CAA CAL CAK 109.9 106.9
CAA CAL HAL 125.1 126.6
CAK CAL HAL 125.1 126.5
CAL CAK NAI 107.9 109.9
CAL CAK HAK 126.0 125.1
NAI CAK HAK 126.1 125.0
CAK NAI CAJ 119.8 125.1
NAI CAJ CAM 127.1 119.6
NAI CAJ NAQ 116.1 119.7
CAM CAJ NAQ 116.8 120.7
CAJ CAM CAN 121.4 119.0
CAJ CAM HAM 119.3 120.5
CAJ NAQ CAP 122.3 121.6
CAN CAM HAM 119.3 120.5
CAM CAN CAO 121.1 118.5
CAM CAN HAN 119.4 120.7
CAO CAN HAN 119.4 120.7
CAN CAO CAP 118.8 119.3
CAN CAO HAO 120.6 120.4
CAP CAO HAO 120.6 120.3
CAO CAP NAQ 119.5 120.9
CAO CAP HAP 120.3 119.6
NAQ CAP HAP 120.2 119.6

Torsion Angles for 7PY

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HAX1 CAX OAW HAX2 120.0 240.0
HAX1 CAX OAW HAX3 240.0 120.0
HAX2 CAX OAW HAX3 120.0 240.0
CAX OAW CAS CAR 96.9 360.0
CAX OAW CAS CAT 266.7 179.7
OAW CAX HAX1 HAX2 240.0 120.0
OAW CAX HAX1 HAX3 120.0 240.0
HAX1 CAX OAW CAS 304.2 60.0
HAX2 CAX HAX1 HAX3 240.0 120.0
OAW CAX HAX2 HAX1 120.0 240.0
OAW CAX HAX2 HAX3 240.0 120.0
HAX2 CAX OAW CAS 184.2 180.0
HAX1 CAX HAX2 HAX3 120.0 240.0
OAW CAX HAX3 HAX1 240.0 120.0
OAW CAX HAX3 HAX2 120.0 240.0
HAX3 CAX OAW CAS 64.2 300.0
HAX1 CAX HAX3 HAX2 240.0 120.0
CAS OAW CAX HAX1 304.2 60.0
CAS OAW CAX HAX2 184.2 180.0
CAS OAW CAX HAX3 64.2 300.0
CAR CAS OAW CAT 190.2 180.2
OAW CAS CAR CAF 167.8 180.0
OAW CAS CAR HAR 347.8 360.0
OAW CAS CAT OAY 17.7 0.2
OAW CAS CAT CAU 192.6 179.8
OAW CAS CAR CAT 169.8 179.8
CAR CAS CAT OAY 187.4 180.0
CAR CAS CAT CAU 2.3 359.5
CAF CAR CAS HAR 180.0 180.0
CAS CAR CAF CAV 0.1 360.0
CAS CAR CAF NAE 170.3 180.0
OAW CAS CAT CAR 190.3 180.2
CAT CAS CAR CAF 358.1 0.2
CAT CAS CAR HAR 178.0 180.2
OAY CAT CAS CAU 185.1 180.5
CAS CAT OAY CAZ 268.8 269.5
CAS CAT CAU OBA 181.3 180.2
CAS CAT CAU CAV 359.1 0.5
CAF CAR CAS CAT 358.1 0.2
CAS CAR CAF HAR 180.0 180.0
CAU CAV CAF CAR 1.3 0.0
CAR CAF CAV HAV 181.3 180.0
CAV CAF CAR NAE 189.9 180.0
CAR CAF NAE CAD 355.8 146.3
CAR CAF NAE HAE 175.8 326.3
HAR CAR CAS CAT 178.0 180.2
CAS CAR HAR CAF 180.0 180.0
HAR CAR CAF CAV 180.2 180.0
HAR CAR CAF NAE 350.3 0.0
CAS CAT OAY CAU 174.9 179.5
OAY CAT CAU OBA 356.2 359.7
OAY CAT CAU CAV 174.1 180.0
CAT OAY CAZ HAZ1 285.7 300.0
CAT OAY CAZ HAZ2 165.6 60.0
CAT OAY CAZ HAZ3 45.7 180.0
CAS CAT CAU OAY 185.0 180.5
CAU CAT OAY CAZ 93.8 90.0
OBA CAU CAT CAV 182.1 179.7
CAT CAU OBA CBB 270.7 180.3
CAT CAU CAV CAF 359.0 359.7
CAT CAU CAV HAV 179.0 179.7
CAZ OAY CAT CAU 93.8 90.0
HAZ1 CAZ OAY HAZ2 120.0 240.0
HAZ1 CAZ OAY HAZ3 240.0 120.0
HAZ2 CAZ OAY HAZ3 120.0 240.1
OAY CAZ HAZ1 HAZ2 240.0 120.0
OAY CAZ HAZ1 HAZ3 120.1 240.0
HAZ2 CAZ HAZ1 HAZ3 240.1 120.0
OAY CAZ HAZ2 HAZ1 120.0 240.0
OAY CAZ HAZ2 HAZ3 240.0 120.0
HAZ1 CAZ HAZ2 HAZ3 120.0 240.0
OAY CAZ HAZ3 HAZ1 240.0 120.0
OAY CAZ HAZ3 HAZ2 120.0 240.1
HAZ1 CAZ HAZ3 HAZ2 240.0 120.0
CAT CAU OBA CAV 177.9 180.3
OBA CAU CAV CAF 176.9 180.0
OBA CAU CAV HAV 356.9 0.0
CAU OBA CBB HBB1 226.8 300.0
CAU OBA CBB HBB2 106.9 60.0
CAU OBA CBB HBB3 346.9 180.0
CAR CAF CAV CAU 1.3 0.0
CAT CAU CAV OBA 182.1 179.7
CAV CAU OBA CBB 92.9 360.0
CAF CAV CAU HAV 180.0 180.0
CAU CAV CAF NAE 190.5 180.0
CBB OBA CAU CAV 92.9 360.0
HBB1 CBB OBA HBB2 120.0 240.0
HBB1 CBB OBA HBB3 240.0 120.0
HBB2 CBB OBA HBB3 120.0 240.0
OBA CBB HBB1 HBB2 240.0 120.0
OBA CBB HBB1 HBB3 120.1 240.0
HBB2 CBB HBB1 HBB3 240.0 120.0
OBA CBB HBB2 HBB1 120.0 240.0
OBA CBB HBB2 HBB3 240.0 120.0
HBB1 CBB HBB2 HBB3 120.0 240.0
OBA CBB HBB3 HBB1 240.0 120.0
OBA CBB HBB3 HBB2 120.0 240.0
HBB1 CBB HBB3 HBB2 240.0 120.0
CAV CAF CAR HAR 180.2 180.0
CAR CAF CAV NAE 170.8 180.0
CAU CAV CAF HAV 180.0 180.0
CAV CAF NAE CAD 166.1 326.4
CAV CAF NAE HAE 346.1 146.4
CAU CAV HAV CAF 180.0 180.0
HAV CAV CAF NAE 10.5 0.0
NAE CAF CAR HAR 350.3 0.0
CAR CAF NAE CAV 189.7 180.0
NAE CAF CAV HAV 10.5 0.0
CAD NAE CAF HAE 180.0 180.0
CAF NAE CAD NAG 341.7 174.1
CAF NAE CAD NAC 177.6 354.4
CAF NAE CAD HAE 180.0 180.0
NAG CAD NAE NAC 164.1 179.7
NAE CAD NAG CAH 197.2 179.7
NAE CAD NAC CAB 163.1 180.0
CAF NAE HAE CAD 180.0 180.0
HAE NAE CAD NAG 161.7 354.1
HAE NAE CAD NAC 357.6 174.4
NAG CAD NAE HAE 161.7 354.1
NAE CAD NAG NAC 195.8 180.3
NAG CAD NAC CAB 358.9 0.3
CAD NAG CAH CAA 359.4 0.5
CAD NAG CAH NAI 179.5 180.2
NAC CAD NAE HAE 357.6 174.4
NAE CAD NAC NAG 164.2 179.7
NAC CAD NAG CAH 1.3 359.4
CAD NAC CAB CAA 0.2 0.0
CAD NAC CAB HAB 180.2 180.0
CAH NAG CAD NAC 1.3 359.4
CAA CAH NAG NAI 179.9 180.3
NAG CAH CAA CAB 359.6 359.8
NAG CAH CAA CAL 179.6 179.8
NAG CAH NAI CAK 180.3 180.3
NAG CAH NAI CAJ 350.9 0.2
NAG CAH CAA NAI 180.1 179.8
CAA CAH NAI CAK 0.3 0.0
CAA CAH NAI CAJ 170.9 179.9
NAC CAB CAA CAH 0.6 360.0
CAH CAA CAB HAB 180.6 180.0
CAB CAA CAH CAL 180.0 180.0
CAH CAA CAL CAK 0.4 0.0
CAH CAA CAL HAL 180.4 180.0
NAG CAH NAI CAA 179.9 180.3
NAI CAH CAA CAB 179.5 180.0
NAI CAH CAA CAL 359.5 360.0
CAL CAK NAI CAH 359.9 360.0
CAH NAI CAK HAK 179.9 180.0
CAK NAI CAH CAJ 189.4 180.1
CAH NAI CAJ CAM 358.8 140.1
CAH NAI CAJ NAQ 178.3 319.8
CAH CAA CAB NAC 0.6 360.0
CAA CAB NAC HAB 180.0 180.0
NAC CAB CAA CAL 180.6 180.0
CAB CAA CAH NAI 179.5 180.0
CAH CAA CAB CAL 180.1 180.0
NAC CAB CAA HAB 180.0 180.0
CAB CAA CAL CAK 180.5 180.0
CAB CAA CAL HAL 0.5 360.0
NAC CAB HAB CAA 180.0 180.0
HAB CAB CAA CAL 0.6 0.0
CAL CAA CAH NAI 359.5 360.0
CAH CAA CAL CAB 179.9 180.0
CAL CAA CAB HAB 0.6 0.0
CAK CAL CAA HAL 180.0 180.1
CAA CAL CAK NAI 359.8 360.0
CAA CAL CAK HAK 179.8 180.0
CAH NAI CAK CAL 359.9 360.0
CAA CAL CAK HAL 180.0 179.9
NAI CAK CAL HAK 180.0 180.0
CAL CAK NAI CAJ 188.2 180.1
CAA CAL HAL CAK 180.0 180.1
HAL CAL CAK NAI 179.8 180.0
HAL CAL CAK HAK 359.7 0.1
CAH NAI CAK CAJ 171.7 179.9
NAI CAK CAL HAL 179.8 180.0
CAL CAK NAI HAK 180.0 180.0
CAK NAI CAJ CAM 168.5 320.0
CAK NAI CAJ NAQ 348.1 139.7
HAK CAK CAL HAL 359.7 0.1
CAL CAK HAK NAI 180.0 180.0
HAK CAK NAI CAJ 8.2 0.1
CAH NAI CAJ CAK 190.2 180.1
CAJ NAI CAK HAK 8.2 0.1
CAM CAJ NAI NAQ 180.5 180.2
NAI CAJ CAM CAN 179.1 180.0
NAI CAJ CAM HAM 359.0 0.0
NAI CAJ NAQ CAP 181.1 179.8
NAI CAJ CAM NAQ 179.5 179.8
CAM CAJ NAQ CAP 0.7 359.5
CAN CAM CAJ HAM 180.0 180.0
CAJ CAM CAN CAO 359.9 0.0
CAJ CAM CAN HAN 179.9 180.0
NAI CAJ NAQ CAM 180.4 180.2
NAQ CAJ CAM CAN 359.5 0.2
NAQ CAJ CAM HAM 179.5 180.2
CAO CAP NAQ CAJ 359.7 0.4
CAJ NAQ CAP HAP 179.7 180.3
CAN CAM CAJ NAQ 359.5 0.2
CAJ CAM CAN HAM 180.0 180.0
CAO CAN CAM HAN 180.0 180.0
CAM CAN CAO CAP 0.4 359.9
CAM CAN CAO HAO 180.4 180.0
HAM CAM CAJ NAQ 179.5 180.2
CAJ CAM HAM CAN 180.0 180.0
HAM CAM CAN CAO 180.0 180.0
HAM CAM CAN HAN 360.0 360.0
CAO CAN CAM HAM 180.0 180.0
CAM CAN CAO HAN 180.0 180.0
CAP CAO CAN HAO 180.0 179.9
CAN CAO CAP NAQ 359.8 359.8
CAN CAO CAP HAP 179.8 180.0
HAN CAN CAM HAM 360.0 360.0
CAM CAN HAN CAO 180.0 180.0
HAN CAN CAO CAP 180.4 180.0
HAN CAN CAO HAO 0.4 0.0
CAJ NAQ CAP CAO 359.7 0.4
CAP CAO CAN HAN 180.4 180.0
CAN CAO CAP HAO 180.0 180.1
NAQ CAP CAO HAP 180.0 179.8
HAO CAO CAN HAN 0.4 0.0
CAN CAO HAO CAP 180.0 179.9
HAO CAO CAP NAQ 179.8 179.7
HAO CAO CAP HAP 359.8 359.9
NAQ CAP CAO HAO 179.8 179.7
CAO CAP NAQ HAP 180.0 180.2
HAP CAP CAO HAO 359.8 359.9
CAO CAP HAP NAQ 180.0 179.8