PDB Chemical Component 7PQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 7PQ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O16 |
C17 |
1.443 |
1.430 |
| O16 |
C15 |
1.448 |
1.430 |
| C25 |
C26 |
1.406 |
1.392 |
| C25 |
C24 |
1.386 |
1.363 |
| C18 |
C17 |
1.542 |
1.531 |
| C18 |
N13 |
1.494 |
1.470 |
| C26 |
C27 |
1.386 |
1.361 |
| C14 |
C15 |
1.549 |
1.531 |
| C14 |
N13 |
1.494 |
1.470 |
| C24 |
C19 |
1.439 |
1.401 |
| C12 |
N13 |
1.479 |
1.469 |
| C12 |
C11 |
1.539 |
1.531 |
| C27 |
C20 |
1.425 |
1.405 |
| C4 |
C5 |
1.404 |
1.376 |
| C4 |
C3 |
1.413 |
1.397 |
| C5 |
C6 |
1.416 |
1.396 |
| N10 |
C11 |
1.467 |
1.464 |
| N10 |
C8 |
1.362 |
1.348 |
| C19 |
C20 |
1.472 |
1.416 |
| C19 |
C7 |
1.474 |
1.416 |
| C20 |
C21 |
1.413 |
1.406 |
| C8 |
C3 |
1.498 |
1.477 |
| C8 |
O9 |
1.231 |
1.216 |
| C3 |
C2 |
1.423 |
1.398 |
| C6 |
C7 |
1.529 |
1.480 |
| C6 |
C1 |
1.432 |
1.397 |
| C7 |
C23 |
1.442 |
1.385 |
| C21 |
C22 |
1.378 |
1.362 |
| C2 |
C1 |
1.404 |
1.376 |
| C23 |
C22 |
1.426 |
1.390 |
| C23 |
C28 |
1.526 |
1.507 |
| C28 |
N29 |
1.445 |
1.469 |
| C1 |
H1 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.079 |
| C4 |
H3 |
1.080 |
1.080 |
| C5 |
H4 |
1.080 |
1.080 |
| N10 |
H5 |
1.000 |
0.971 |
| C11 |
H6 |
1.100 |
1.090 |
| C11 |
H7 |
1.100 |
1.091 |
| C12 |
H8 |
1.100 |
1.090 |
| C12 |
H9 |
1.100 |
1.090 |
| C14 |
H11 |
1.100 |
1.090 |
| C14 |
H12 |
1.100 |
1.090 |
| C15 |
H13 |
1.100 |
1.090 |
| C15 |
H14 |
1.100 |
1.090 |
| C17 |
H15 |
1.100 |
1.090 |
| C17 |
H16 |
1.100 |
1.089 |
| C18 |
H17 |
1.100 |
1.091 |
| C18 |
H18 |
1.100 |
1.090 |
| C21 |
H19 |
1.079 |
1.080 |
| C22 |
H20 |
1.080 |
1.079 |
| C24 |
H21 |
1.080 |
1.080 |
| C25 |
H22 |
1.080 |
1.080 |
| C26 |
H23 |
1.080 |
1.080 |
| C27 |
H24 |
1.080 |
1.080 |
| C28 |
H25 |
1.100 |
1.090 |
| C28 |
H26 |
1.100 |
1.090 |
| N29 |
H27 |
1.000 |
1.009 |
| N29 |
H28 |
1.000 |
1.009 |
Bond Angles for 7PQ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O16 |
C17 |
H15 |
109.6 |
109.5 |
| O16 |
C17 |
H16 |
109.6 |
109.5 |
| O16 |
C15 |
H13 |
109.4 |
109.5 |
| O16 |
C15 |
H14 |
109.4 |
109.5 |
| C25 |
C26 |
C27 |
121.2 |
121.0 |
| C26 |
C25 |
H22 |
119.4 |
119.6 |
| C25 |
C26 |
H23 |
119.4 |
119.5 |
| C25 |
C24 |
H21 |
119.8 |
120.1 |
| C18 |
C17 |
H15 |
109.6 |
109.5 |
| C18 |
C17 |
H16 |
109.6 |
109.6 |
| C27 |
C26 |
H23 |
119.4 |
119.6 |
| C26 |
C27 |
H24 |
119.9 |
120.2 |
| C15 |
C14 |
H11 |
109.3 |
109.5 |
| C15 |
C14 |
H12 |
109.4 |
109.5 |
| C14 |
C15 |
H13 |
109.4 |
109.5 |
| C14 |
C15 |
H14 |
109.4 |
109.5 |
| N13 |
C12 |
H8 |
109.1 |
109.5 |
| N13 |
C12 |
H9 |
109.1 |
109.5 |
| C12 |
C11 |
H6 |
109.7 |
109.5 |
| C12 |
C11 |
H7 |
109.7 |
109.5 |
| C4 |
C5 |
C6 |
120.5 |
120.0 |
| C5 |
C4 |
H3 |
119.5 |
119.9 |
| C4 |
C5 |
H4 |
119.8 |
120.0 |
| C5 |
C6 |
C7 |
121.8 |
120.0 |
| C6 |
C5 |
H4 |
119.7 |
120.0 |
| C11 |
N10 |
H5 |
118.9 |
120.0 |
| N10 |
C11 |
H6 |
109.7 |
109.5 |
| N10 |
C11 |
H7 |
109.7 |
109.4 |
| C19 |
C20 |
C21 |
120.3 |
119.5 |
| C19 |
C7 |
C23 |
117.4 |
119.3 |
| C20 |
C21 |
C22 |
120.0 |
120.1 |
| C20 |
C21 |
H19 |
120.0 |
120.0 |
| C3 |
C2 |
H2 |
119.9 |
120.0 |
| C6 |
C7 |
C23 |
120.9 |
120.4 |
| C6 |
C1 |
H1 |
119.7 |
120.0 |
| C7 |
C23 |
C22 |
120.5 |
120.7 |
| C7 |
C23 |
C28 |
120.6 |
119.6 |
| C22 |
C21 |
H19 |
120.0 |
119.9 |
| C21 |
C22 |
H20 |
118.7 |
119.5 |
| C2 |
C1 |
H1 |
119.7 |
120.0 |
| C23 |
C22 |
H20 |
118.7 |
119.4 |
| C23 |
C28 |
N29 |
112.0 |
109.5 |
| C23 |
C28 |
H25 |
108.8 |
109.5 |
| C23 |
C28 |
H26 |
108.8 |
109.5 |
| N29 |
C28 |
H25 |
108.8 |
109.5 |
| N29 |
C28 |
H26 |
108.8 |
109.4 |
| C28 |
N29 |
H27 |
109.5 |
111.0 |
| C28 |
N29 |
H28 |
109.4 |
111.0 |
| H6 |
C11 |
H7 |
109.5 |
109.5 |
| H8 |
C12 |
H9 |
109.4 |
109.5 |
| H11 |
C14 |
H12 |
109.5 |
109.6 |
| H13 |
C15 |
H14 |
109.5 |
109.5 |
| H15 |
C17 |
H16 |
109.5 |
109.6 |
| H17 |
C18 |
H18 |
109.5 |
109.5 |
| H25 |
C28 |
H26 |
109.5 |
109.4 |
| H27 |
N29 |
H28 |
109.5 |
111.0 |
Torsion Angles for 7PQ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C17 |
O16 |
C15 |
H13 |
55.6 |
181.4 |
| C17 |
O16 |
C15 |
H14 |
175.5 |
61.2 |
| C18 |
C17 |
O16 |
H15 |
240.1 |
240.1 |
| C18 |
C17 |
O16 |
H16 |
119.9 |
120.0 |
| H15 |
C17 |
O16 |
H16 |
239.9 |
239.9 |
| O16 |
C15 |
C14 |
H11 |
179.0 |
296.9 |
| O16 |
C15 |
C14 |
H12 |
298.8 |
176.8 |
| C14 |
C15 |
O16 |
H13 |
240.0 |
119.9 |
| C14 |
C15 |
O16 |
H14 |
120.1 |
240.1 |
| H13 |
C15 |
O16 |
H14 |
240.1 |
120.1 |
| C26 |
C25 |
C24 |
H21 |
179.3 |
180.0 |
| C27 |
C26 |
C25 |
H23 |
180.0 |
179.9 |
| C25 |
C26 |
C27 |
H24 |
179.7 |
180.0 |
| O16 |
C17 |
C18 |
H15 |
119.9 |
119.9 |
| O16 |
C17 |
C18 |
H16 |
240.1 |
240.1 |
| H15 |
C17 |
C18 |
H16 |
120.1 |
120.2 |
| C18 |
N13 |
C12 |
H8 |
199.9 |
306.5 |
| C18 |
N13 |
C12 |
H9 |
319.3 |
186.4 |
| C27 |
C26 |
C25 |
H22 |
180.7 |
180.0 |
| C25 |
C26 |
C27 |
H23 |
180.0 |
180.1 |
| O16 |
C15 |
C14 |
H13 |
120.0 |
240.1 |
| O16 |
C15 |
C14 |
H14 |
240.0 |
120.0 |
| H11 |
C14 |
C15 |
H12 |
240.1 |
120.2 |
| H13 |
C15 |
C14 |
H14 |
119.9 |
239.9 |
| C14 |
N13 |
C12 |
H8 |
317.9 |
70.0 |
| C14 |
N13 |
C12 |
H9 |
77.3 |
310.0 |
| N13 |
C12 |
C11 |
H6 |
300.7 |
60.0 |
| N13 |
C12 |
C11 |
H7 |
61.0 |
300.0 |
| H8 |
C12 |
N13 |
H9 |
240.6 |
120.1 |
| C12 |
C11 |
N10 |
H5 |
359.7 |
0.0 |
| N10 |
C11 |
C12 |
H6 |
240.1 |
120.0 |
| N10 |
C11 |
C12 |
H7 |
119.9 |
240.0 |
| H6 |
C11 |
C12 |
H7 |
239.7 |
120.0 |
| C27 |
C20 |
C21 |
H19 |
359.9 |
0.1 |
| C4 |
C5 |
C6 |
C7 |
179.3 |
180.0 |
| C6 |
C5 |
C4 |
H4 |
180.0 |
179.7 |
| C4 |
C3 |
C2 |
H2 |
180.0 |
180.1 |
| C6 |
C5 |
C4 |
H3 |
180.1 |
180.0 |
| C4 |
C5 |
C6 |
H4 |
180.0 |
180.3 |
| C5 |
C6 |
C7 |
C23 |
298.2 |
65.0 |
| C5 |
C6 |
C1 |
H1 |
179.6 |
179.7 |
| C12 |
C11 |
N10 |
H6 |
119.9 |
240.0 |
| C12 |
C11 |
N10 |
H7 |
240.2 |
120.0 |
| H6 |
C11 |
N10 |
H7 |
120.3 |
240.0 |
| C20 |
C19 |
C7 |
C23 |
358.7 |
0.3 |
| C19 |
C20 |
C21 |
C22 |
359.5 |
359.9 |
| C19 |
C20 |
C21 |
H19 |
179.5 |
180.0 |
| C6 |
C7 |
C19 |
C23 |
179.8 |
179.7 |
| C19 |
C7 |
C23 |
C22 |
0.5 |
359.4 |
| C19 |
C7 |
C23 |
C28 |
180.1 |
179.7 |
| C22 |
C21 |
C20 |
H19 |
180.0 |
179.9 |
| C20 |
C21 |
C22 |
H20 |
179.7 |
180.0 |
| C8 |
C3 |
C2 |
H2 |
360.0 |
0.1 |
| C3 |
C2 |
C1 |
H1 |
180.3 |
180.0 |
| C7 |
C6 |
C5 |
H4 |
359.3 |
359.7 |
| C19 |
C7 |
C6 |
C23 |
180.2 |
180.3 |
| C7 |
C6 |
C1 |
H1 |
0.5 |
0.3 |
| C6 |
C7 |
C23 |
C22 |
180.7 |
179.8 |
| C6 |
C7 |
C23 |
C28 |
0.3 |
0.1 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.6 |
| C7 |
C23 |
C22 |
H20 |
180.3 |
180.3 |
| C7 |
C23 |
C28 |
N29 |
207.8 |
80.0 |
| C7 |
C23 |
C28 |
H25 |
328.2 |
200.0 |
| C7 |
C23 |
C28 |
H26 |
87.5 |
320.0 |
| C20 |
C21 |
C22 |
H19 |
180.0 |
180.1 |
| C7 |
C23 |
C22 |
C21 |
0.3 |
0.5 |
| C23 |
C22 |
C21 |
H20 |
180.0 |
179.8 |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.4 |
| C7 |
C23 |
C22 |
C28 |
179.6 |
180.3 |
| C23 |
C22 |
C21 |
H19 |
179.7 |
179.7 |
| C21 |
C22 |
C23 |
H20 |
180.0 |
180.2 |
| C7 |
C23 |
C28 |
C22 |
180.4 |
179.7 |
| C28 |
C23 |
C22 |
H20 |
0.7 |
0.1 |
| N29 |
C28 |
C23 |
H25 |
239.6 |
240.0 |
| N29 |
C28 |
C23 |
H26 |
120.4 |
120.0 |
| C23 |
C28 |
N29 |
H27 |
180.0 |
179.9 |
| C23 |
C28 |
N29 |
H28 |
300.0 |
303.9 |
| H25 |
C28 |
C23 |
H26 |
240.7 |
240.0 |
| C23 |
C28 |
N29 |
H25 |
120.4 |
120.0 |
| C23 |
C28 |
N29 |
H26 |
239.6 |
240.0 |
| H25 |
C28 |
N29 |
H26 |
119.2 |
120.0 |
| H27 |
N29 |
C28 |
H28 |
240.0 |
236.0 |
| H2 |
C2 |
C1 |
H1 |
0.3 |
359.9 |
| H3 |
C4 |
C5 |
C6 |
180.1 |
180.0 |
| H3 |
C4 |
C5 |
H4 |
0.1 |
0.3 |
| C4 |
C5 |
H4 |
C6 |
180.0 |
179.7 |
| H4 |
C5 |
C4 |
H3 |
0.1 |
0.3 |
| H4 |
C5 |
C6 |
C7 |
359.3 |
359.7 |
| H5 |
N10 |
C11 |
H6 |
239.8 |
120.1 |
| H5 |
N10 |
C11 |
H7 |
119.5 |
240.0 |
| C12 |
C11 |
H6 |
H7 |
120.4 |
240.0 |
| H6 |
C11 |
N10 |
H5 |
239.8 |
120.1 |
| N10 |
C11 |
H6 |
H7 |
239.5 |
119.9 |
| C12 |
C11 |
H7 |
H6 |
239.6 |
120.0 |
| H7 |
C11 |
N10 |
H5 |
119.5 |
240.0 |
| N10 |
C11 |
H7 |
H6 |
120.5 |
240.0 |
| N13 |
C12 |
H8 |
H9 |
119.2 |
239.9 |
| H8 |
C12 |
C11 |
H6 |
180.4 |
180.0 |
| H8 |
C12 |
C11 |
H7 |
300.7 |
60.0 |
| N13 |
C12 |
H9 |
H8 |
240.8 |
120.1 |
| H9 |
C12 |
C11 |
H6 |
61.0 |
299.9 |
| H9 |
C12 |
C11 |
H7 |
181.3 |
179.9 |
| C15 |
C14 |
H11 |
H12 |
119.8 |
239.9 |
| H11 |
C14 |
C15 |
H13 |
58.9 |
56.9 |
| H11 |
C14 |
C15 |
H14 |
299.0 |
177.0 |
| C15 |
C14 |
H12 |
H11 |
240.2 |
120.1 |
| H12 |
C14 |
C15 |
H13 |
178.8 |
296.7 |
| H12 |
C14 |
C15 |
H14 |
58.9 |
56.8 |
| O16 |
C15 |
H13 |
H14 |
119.9 |
239.9 |
| H13 |
C15 |
C14 |
H11 |
58.9 |
56.9 |
| H13 |
C15 |
C14 |
H12 |
178.8 |
296.7 |
| C14 |
C15 |
H13 |
H14 |
240.1 |
120.1 |
| O16 |
C15 |
H14 |
H13 |
240.1 |
120.1 |
| H14 |
C15 |
C14 |
H11 |
299.0 |
177.0 |
| H14 |
C15 |
C14 |
H12 |
58.9 |
56.8 |
| C14 |
C15 |
H14 |
H13 |
119.9 |
239.9 |
| O16 |
C17 |
H15 |
H16 |
120.2 |
120.1 |
| C18 |
C17 |
H15 |
H16 |
239.8 |
239.8 |
| O16 |
C17 |
H16 |
H15 |
239.8 |
239.9 |
| C18 |
C17 |
H16 |
H15 |
120.2 |
120.2 |
| H17 |
C18 |
C17 |
H15 |
300.5 |
63.3 |
| H17 |
C18 |
C17 |
H16 |
180.3 |
303.1 |
| H18 |
C18 |
C17 |
H15 |
60.1 |
303.2 |
| H18 |
C18 |
C17 |
H16 |
300.0 |
183.0 |
| C20 |
C21 |
H19 |
C22 |
180.0 |
179.9 |
| H19 |
C21 |
C22 |
H20 |
359.7 |
359.9 |
| H20 |
C22 |
C21 |
H19 |
359.7 |
359.9 |
| H22 |
C25 |
C26 |
C27 |
180.7 |
180.0 |
| H22 |
C25 |
C26 |
H23 |
0.7 |
0.1 |
| H22 |
C25 |
C24 |
H21 |
359.3 |
359.9 |
| C25 |
C26 |
H23 |
C27 |
180.0 |
179.9 |
| H23 |
C26 |
C25 |
H22 |
0.7 |
0.1 |
| H23 |
C26 |
C27 |
H24 |
359.7 |
359.9 |
| H24 |
C27 |
C26 |
H23 |
359.7 |
359.9 |
| C23 |
C28 |
H25 |
N29 |
237.7 |
240.0 |
| C23 |
C28 |
H25 |
H26 |
118.9 |
120.0 |
| N29 |
C28 |
H25 |
H26 |
241.2 |
240.0 |
| H25 |
C28 |
N29 |
H27 |
59.6 |
59.9 |
| H25 |
C28 |
N29 |
H28 |
179.6 |
183.9 |
| C23 |
C28 |
H26 |
N29 |
122.3 |
120.0 |
| C23 |
C28 |
H26 |
H25 |
241.1 |
240.0 |
| N29 |
C28 |
H26 |
H25 |
118.8 |
120.0 |
| H26 |
C28 |
N29 |
H27 |
300.4 |
300.0 |
| H26 |
C28 |
N29 |
H28 |
60.4 |
63.9 |
| H27 |
N29 |
C28 |
H25 |
59.6 |
59.9 |
| H27 |
N29 |
C28 |
H26 |
300.4 |
300.0 |
| C28 |
N29 |
H27 |
H28 |
120.0 |
123.9 |
| H28 |
N29 |
C28 |
H25 |
179.6 |
183.9 |
| H28 |
N29 |
C28 |
H26 |
60.4 |
63.9 |
| C28 |
N29 |
H28 |
H27 |
240.0 |
236.1 |