PDB Chemical Component 7PA

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7PA

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O1 P2 1.547 1.489
O2 P2 1.530 1.610
O2 HO2 0.950 0.981
C1 C2 1.533 1.522
C1 P1 1.850 1.806
C1 H11 1.100 1.095
C1 H12 1.100 1.096
C2 C3 1.536 1.523
C2 H21 1.100 1.096
C2 H22 1.099 1.096
P1 O3 1.547 1.488
P1 O4 1.531 1.610
P1 O6 1.507 1.610
C3 P2 1.859 1.806
C3 H31 1.100 1.095
C3 H32 1.100 1.094
P2 O5 1.521 1.610
O4 HO4 0.950 0.981
O5 HO5 0.950 0.981
O6 HO6 0.950 0.981

Bond Angles for 7PA

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O1 P2 O2 111.1 116.2
O1 P2 C3 101.8 113.6
O1 P2 O5 111.8 116.2
P2 O2 HO2 109.5 118.1
O2 P2 C3 108.2 102.5
O2 P2 O5 113.1 104.0
C2 C1 P1 132.4 113.8
C2 C1 H11 102.4 111.0
C2 C1 H12 97.1 109.0
C1 C2 C3 113.8 113.3
C1 C2 H21 108.1 108.9
C1 C2 H22 107.1 109.1
P1 C1 H11 102.4 108.6
P1 C1 H12 97.1 107.2
C1 P1 O3 100.9 113.7
C1 P1 O4 109.0 102.5
C1 P1 O6 110.5 102.5
H11 C1 H12 129.9 107.0
C3 C2 H21 108.1 109.1
C3 C2 H22 107.1 108.8
C2 C3 P2 132.0 113.8
C2 C3 H31 102.5 109.0
C2 C3 H32 97.3 110.9
H21 C2 H22 112.9 107.5
O3 P1 O4 110.1 116.2
O3 P1 O6 113.1 116.2
O4 P1 O6 112.6 104.0
P1 O4 HO4 109.5 118.1
P1 O6 HO6 109.5 118.1
P2 C3 H31 102.5 107.2
P2 C3 H32 97.3 108.5
C3 P2 O5 110.3 102.5
H31 C3 H32 129.5 107.1
P2 O5 HO5 109.5 118.1

Torsion Angles for 7PA

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 P2 O2 HO2 307.9 53.3
O2 P2 O1 C3 115.0 118.5
O2 P2 O1 O5 232.6 237.2
C2 C3 P2 O1 318.2 299.9
O1 P2 C3 H31 198.2 60.6
O1 P2 C3 H32 65.0 175.9
C3 P2 O1 O5 117.6 118.6
O1 P2 O5 HO5 308.9 306.9
O1 P2 O2 C3 249.1 235.5
O1 P2 O2 O5 126.6 129.0
C2 C3 P2 O2 201.1 173.8
O2 P2 C3 H31 81.1 294.4
O2 P2 C3 H32 307.8 49.8
C3 P2 O2 O5 237.6 253.5
O2 P2 O5 HO5 75.2 75.9
HO2 O2 P2 C3 58.9 177.8
HO2 O2 P2 O5 181.3 284.3
P1 C1 C2 H11 240.0 237.2
P1 C1 C2 H12 106.4 119.6
C2 C1 P1 O3 318.2 300.0
C2 C1 P1 O4 202.3 173.8
C2 C1 P1 O6 78.1 66.2
H11 C1 C2 H12 226.4 242.4
C3 C2 C1 H21 240.0 121.6
C3 C2 C1 H22 118.1 238.7
C1 C2 C3 P2 131.1 179.6
C1 C2 C3 H31 251.1 60.0
C1 C2 C3 H32 24.4 302.3
H21 C2 C1 H22 238.1 117.1
C2 C1 P1 H11 120.0 124.1
C2 C1 P1 H12 253.6 239.4
P1 C1 C2 C3 139.4 177.3
P1 C1 C2 H21 259.4 55.7
P1 C1 C2 H22 21.3 298.6
H11 C1 P1 H12 133.6 115.3
O3 P1 C1 O4 115.9 126.2
O3 P1 C1 O6 240.0 233.8
O4 P1 C1 O6 124.2 107.6
C1 P1 O4 HO4 237.3 177.8
C1 P1 O6 HO6 294.4 182.3
C2 C1 H11 P1 220.9 234.2
C2 C1 H11 H12 110.4 118.8
H11 C1 C2 C3 259.4 300.1
H11 C1 C2 H21 19.4 178.5
H11 C1 C2 H22 141.3 61.4
P1 C1 H11 H12 249.6 244.6
H11 C1 P1 O3 198.2 175.9
H11 C1 P1 O4 82.3 49.7
H11 C1 P1 O6 318.2 302.1
C2 C1 H12 P1 134.5 123.6
C2 C1 H12 H11 247.3 239.9
H12 C1 C2 C3 33.0 57.7
H12 C1 C2 H21 153.0 296.1
H12 C1 C2 H22 274.9 179.0
P1 C1 H12 H11 112.8 116.3
H12 C1 P1 O3 64.6 60.6
H12 C1 P1 O4 308.7 294.4
H12 C1 P1 O6 184.6 186.8
O1 P2 C3 C2 318.2 299.9
O2 P2 C3 C2 201.1 173.8
C3 C2 C1 P1 139.4 177.3
C3 C2 C1 H11 259.4 300.1
C3 C2 C1 H12 33.0 57.7
C1 C2 C3 H21 120.0 238.5
C1 C2 C3 H22 241.9 121.5
H21 C2 C3 H22 121.9 243.0
P2 C3 C2 H31 240.0 119.6
P2 C3 C2 H32 106.8 237.3
C2 C3 P2 O5 76.9 66.1
H31 C3 C2 H32 226.8 117.7
H21 C2 C1 P1 259.4 55.7
H21 C2 C1 H11 19.4 178.5
H21 C2 C1 H12 153.0 296.1
C1 C2 H21 C3 236.4 124.1
C1 C2 H21 H22 118.2 241.9
C3 C2 H21 H22 241.8 117.8
H21 C2 C3 P2 11.1 301.1
H21 C2 C3 H31 131.1 181.4
H21 C2 C3 H32 264.3 63.8
H22 C2 C1 P1 21.3 298.6
H22 C2 C1 H11 141.3 61.4
H22 C2 C1 H12 274.9 179.0
C1 C2 H22 C3 122.4 236.0
C1 C2 H22 H21 241.2 117.9
C3 C2 H22 H21 118.8 242.0
H22 C2 C3 P2 249.2 58.1
H22 C2 C3 H31 9.2 298.5
H22 C2 C3 H32 142.5 180.8
O3 P1 C1 H11 198.2 175.9
O3 P1 C1 H12 64.6 60.6
C1 P1 O3 O4 245.0 241.4
C1 P1 O3 O6 118.1 118.6
O4 P1 O3 O6 233.1 237.2
O3 P1 O4 HO4 127.4 53.2
O3 P1 O6 HO6 46.7 306.9
O4 P1 C1 H11 82.3 49.7
O4 P1 C1 H12 308.7 294.4
C1 P1 O4 O3 109.8 124.6
C1 P1 O4 O6 237.0 253.6
O3 P1 O4 O6 127.2 129.0
O4 P1 O6 HO6 172.3 75.9
O6 P1 C1 H11 318.2 302.1
O6 P1 C1 H12 184.6 186.8
C1 P1 O6 O3 247.7 235.4
C1 P1 O6 O4 122.1 106.4
O3 P1 O6 O4 234.4 231.0
O6 P1 O4 HO4 0.2 284.2
O1 P2 C3 O2 117.1 126.2
O1 P2 C3 O5 241.3 233.8
C3 P2 O2 HO2 58.9 177.8
O2 P2 C3 O5 124.1 107.6
P2 C3 C2 H21 11.1 301.1
P2 C3 C2 H22 249.2 58.1
C2 C3 P2 H31 120.0 239.3
C2 C3 P2 H32 253.2 124.0
H31 C3 P2 H32 133.3 244.6
C3 P2 O5 HO5 196.5 182.3
H31 C3 C2 H21 131.1 181.4
H31 C3 C2 H22 9.2 298.5
C2 C3 H31 P2 221.2 123.6
C2 C3 H31 H32 110.6 240.0
P2 C3 H31 H32 249.4 116.3
H31 C3 P2 O5 317.0 186.8
H32 C3 C2 H21 264.3 63.8
H32 C3 C2 H22 142.5 180.8
C2 C3 H32 P2 134.2 234.3
C2 C3 H32 H31 247.1 118.8
P2 C3 H32 H31 112.9 244.6
H32 C3 P2 O5 183.7 302.1
O1 P2 O5 O2 233.7 231.0
O1 P2 O5 C3 112.4 124.5
O5 P2 O2 HO2 181.3 284.3
O2 P2 O5 C3 238.7 253.5
O5 P2 C3 H31 317.0 186.8
O5 P2 C3 H32 183.7 302.1
HO4 O4 P1 O6 0.2 284.2