PDB Chemical Component 7O2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7O2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C28 C27 1.393 1.383
C28 C29 1.388 1.383
C27 C26 1.381 1.382
C29 C30 1.385 1.382
C26 C25 1.385 1.383
C30 C25 1.402 1.382
C25 C18 1.481 1.507
C18 C17 1.524 1.530
C18 C19 1.483 1.507
C17 C16 1.529 1.531
N43 C42 1.417 1.347
C19 C24 1.394 1.383
C19 C20 1.389 1.382
O32 C31 1.226 1.213
C24 C23 1.379 1.382
C15 C16 1.527 1.530
C15 P12 1.811 1.822
O44 C42 1.221 1.213
C16 C31 1.504 1.507
C20 C21 1.389 1.382
C42 C34 1.500 1.507
C31 N33 1.339 1.347
C23 C22 1.391 1.382
O14 P12 1.503 1.480
C21 C22 1.388 1.383
N33 C34 1.455 1.465
C34 C35 1.543 1.530
P12 O13 1.504 1.610
P12 C1 1.816 1.823
C41 C40 1.397 1.383
C41 C36 1.403 1.382
C40 C39 1.392 1.382
C1 C2 1.524 1.530
C1 N11 1.488 1.469
C35 C36 1.517 1.508
C2 C3 1.533 1.530
C36 C37 1.393 1.382
C39 C38 1.395 1.382
C9 C8 1.391 1.383
C9 C4 1.390 1.382
C3 C4 1.519 1.506
C8 C7 1.384 1.382
C37 C38 1.397 1.382
C4 C5 1.389 1.383
C7 C6 1.397 1.382
C5 C6 1.392 1.382
C1 H1 1.100 1.090
C2 H2 1.100 1.090
C2 H3 1.100 1.090
C3 H4 1.100 1.090
C3 H5 1.100 1.090
C6 H6 1.080 1.080
N11 H7 1.000 1.009
N11 H8 1.000 1.009
C15 H10 1.100 1.091
C15 H11 1.100 1.090
C16 H12 1.100 1.090
C17 H13 1.100 1.090
C17 H14 1.100 1.090
C18 H15 1.100 1.090
C5 H16 1.080 1.080
C7 H17 1.080 1.080
C8 H18 1.080 1.080
C9 H19 1.080 1.080
O13 H20 0.950 0.968
C20 H21 1.080 1.080
C21 H22 1.080 1.080
C22 H23 1.080 1.080
C23 H24 1.080 1.080
C24 H25 1.080 1.081
C26 H26 1.081 1.080
C27 H27 1.080 1.080
C28 H28 1.080 1.080
C29 H29 1.080 1.080
C30 H30 1.080 1.080
N33 H31 1.000 0.970
C34 H32 1.100 1.089
C35 H33 1.100 1.089
C35 H34 1.100 1.090
C37 H35 1.079 1.080
C38 H36 1.080 1.080
C39 H37 1.080 1.080
C40 H38 1.080 1.080
C41 H39 1.080 1.080
N43 H40 1.000 0.971
N43 H41 1.000 0.969

Bond Angles for 7O2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C28 C27 H27 119.4 120.0
C28 C29 C30 117.5 120.0
C29 C28 H28 119.5 120.0
C28 C29 H29 121.2 120.0
C27 C26 H26 120.8 120.0
C30 C29 H29 121.3 120.0
C29 C30 H30 119.2 120.0
C25 C18 H15 109.4 109.5
C18 C17 H13 108.3 109.5
C18 C17 H14 108.3 109.5
C18 C19 C24 122.6 120.0
C18 C19 C20 117.7 120.0
C19 C18 H15 109.3 109.5
C17 C16 C31 111.1 109.4
C17 C16 H12 110.0 109.5
C20 C19 C24 119.7 120.0
C19 C24 C23 120.4 120.0
C19 C24 H25 119.8 120.0
C19 C20 C21 120.6 120.0
C19 C20 H21 119.7 120.0
O32 C31 N33 122.4 120.0
C24 C23 H24 120.3 120.0
C16 C15 P12 112.1 109.5
C15 C16 C31 107.4 109.5
C16 C15 H10 108.8 109.5
C16 C15 H11 108.8 109.5
C15 C16 H12 110.1 109.5
C15 P12 O13 107.2 109.5
P12 C15 H10 108.8 109.5
P12 C15 H11 108.8 109.4
C16 C31 N33 118.0 120.0
C31 C16 H12 110.4 109.5
C20 C21 C22 118.9 120.0
C21 C20 H21 119.7 120.0
C20 C21 H22 120.6 120.0
C42 C34 H32 107.1 109.5
C31 N33 C34 118.7 120.0
C31 N33 H31 120.7 120.0
C23 C22 H23 119.4 120.0
C22 C21 H22 120.5 120.0
C21 C22 H23 119.4 120.1
N33 C34 C35 114.3 109.5
C34 N33 H31 120.7 120.0
N33 C34 H32 107.6 109.4
C34 C35 C36 113.4 109.5
C35 C34 H32 106.6 109.5
C34 C35 H33 108.5 109.5
C34 C35 H34 108.5 109.4
P12 O13 H20 109.5 114.0
P12 C1 H1 106.8 109.5
C41 C40 H38 120.4 120.0
C40 C39 H37 119.9 120.0
C2 C1 N11 110.4 109.5
C1 C2 C3 112.1 109.5
C2 C1 H1 110.2 109.5
C1 C2 H2 108.8 109.5
C1 C2 H3 108.8 109.5
N11 C1 H1 110.7 109.5
C1 N11 H7 109.5 111.0
C1 N11 H8 109.4 111.0
C35 C36 C37 119.4 120.0
C36 C35 H33 108.5 109.5
C36 C35 H34 108.5 109.4
C2 C3 C4 109.0 109.5
C3 C2 H2 108.8 109.5
C3 C2 H3 108.8 109.5
C2 C3 H4 109.6 109.5
C2 C3 H5 109.6 109.5
C36 C37 C38 119.6 120.0
C36 C37 H35 120.2 120.0
C39 C38 H36 119.6 120.0
C9 C8 H18 119.7 120.0
C3 C4 C5 120.6 120.0
C4 C3 H4 109.6 109.5
C4 C3 H5 109.6 109.4
C8 C7 H17 120.7 120.0
C38 C37 H35 120.2 120.0
C37 C38 H36 119.7 120.0
C4 C5 H16 120.0 120.0
C7 C6 H6 119.5 120.0
C5 C6 H6 119.5 120.0
H2 C2 H3 109.5 109.5
H4 C3 H5 109.5 109.5
H7 N11 H8 109.5 110.9
H10 C15 H11 109.5 109.5
H13 C17 H14 109.5 109.5
H33 C35 H34 109.4 109.5
H40 N43 H41 120.1 120.0

Torsion Angles for 7O2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C28 C27 C26 H26 179.6 180.0
C29 C28 C27 H27 179.6 180.0
C30 C29 C28 H29 180.0 179.8
C28 C29 C30 H30 178.7 180.0
C30 C29 C28 H28 181.2 179.7
C28 C29 C30 H29 180.0 180.2
C26 C25 C18 H15 4.7 7.5
C30 C25 C18 H15 183.1 187.2
C25 C18 C17 H13 310.5 66.1
C25 C18 C17 H14 69.2 306.0
C19 C18 C25 H15 244.3 240.0
C18 C17 C16 C31 49.8 65.5
C18 C17 C16 H12 287.3 305.6
H13 C17 C18 H14 241.4 120.0
C25 C18 C19 H15 115.7 120.0
C19 C18 C17 H13 194.5 306.1
C19 C18 C17 H14 313.1 186.1
C20 C19 C18 C24 177.1 180.3
C18 C19 C24 C23 177.5 179.7
C18 C19 C24 H25 357.5 0.0
C18 C19 C20 C21 181.8 180.0
C18 C19 C20 H21 1.8 0.0
C17 C16 C15 P12 128.6 75.0
C15 C16 C17 C31 117.4 120.0
C17 C16 C15 H10 249.0 195.0
C17 C16 C15 H11 8.3 315.0
C15 C16 C17 H12 240.0 240.0
C17 C16 C31 N33 259.5 210.3
C31 C16 C17 H12 122.6 120.0
N43 C42 C34 H32 230.0 60.0
C18 C19 C24 C20 177.0 180.3
C24 C19 C18 H15 171.0 353.2
C24 C19 C20 C21 359.0 0.3
C24 C19 C20 H21 179.0 180.3
C19 C24 C23 H24 180.3 180.3
C18 C19 C20 C24 182.8 179.7
C20 C19 C18 H15 348.1 173.5
C20 C19 C24 C23 0.5 359.5
C20 C19 C24 H25 180.5 179.8
C19 C20 C21 C22 0.6 360.0
C21 C20 C19 H21 180.0 180.0
C19 C20 C21 H22 180.6 180.0
C16 C31 O32 N33 179.1 180.0
O32 C31 C16 H12 202.7 150.3
O32 C31 N33 C34 9.5 4.8
O32 C31 N33 H31 189.5 184.8
C19 C24 C23 H25 180.0 180.3
C24 C23 C22 H23 179.2 179.8
C17 C16 C15 C31 240.2 240.0
C17 C16 C15 H12 120.0 120.0
C16 C15 P12 O13 353.1 65.0
P12 C15 C16 H10 239.6 240.0
P12 C15 C16 H11 120.4 120.0
C15 C16 C31 N33 141.9 90.3
C31 C16 C15 H12 239.7 240.0
H10 C15 C16 H11 240.8 240.0
P12 C15 C16 C31 248.4 195.0
C16 C15 P12 H10 120.4 120.0
C16 C15 P12 H11 239.6 240.0
P12 C15 C16 H12 8.7 315.0
C15 P12 O13 H20 241.1 60.0
C15 P12 C1 H1 68.6 300.0
H10 C15 P12 H11 119.2 120.0
O44 C42 C34 H32 48.6 240.0
C17 C16 C31 H12 237.6 240.0
O32 C31 C16 N33 180.8 180.0
C31 C16 C15 P12 248.4 195.0
C31 C16 C15 H10 8.8 315.0
C31 C16 C15 H11 128.0 75.0
C15 C16 C31 H12 120.1 120.0
C16 C31 N33 C34 190.4 184.8
C16 C31 N33 H31 10.4 4.7
C21 C20 C19 C24 359.0 0.3
C19 C20 C21 H21 180.0 180.0
C22 C21 C20 H22 180.0 180.0
C20 C21 C22 H23 180.3 180.0
C42 C34 N33 H31 100.6 92.8
N33 C34 C42 H32 115.6 119.9
C35 C34 C42 H32 243.0 239.9
C42 C34 C35 H33 50.4 294.8
C42 C34 C35 H34 169.2 54.9
N33 C31 C16 H12 21.9 330.3
C31 N33 C34 C35 154.1 152.8
C34 N33 C31 H31 180.0 180.0
C31 N33 C34 H32 35.9 32.8
C19 C24 C23 C22 0.4 0.5
C23 C22 C21 H22 180.3 180.0
C21 C22 C23 H23 180.0 180.0
O14 P12 C15 H10 104.3 185.0
O14 P12 C15 H11 345.1 65.0
O14 P12 O13 H20 360.0 180.0
O14 P12 C1 H1 315.2 180.0
C22 C21 C20 H21 180.6 180.0
C20 C21 C22 H22 180.0 180.0
C23 C22 C21 H23 180.0 180.0
C42 C34 N33 H32 244.7 240.0
C31 N33 C34 H31 180.0 180.0
N33 C34 C35 C36 53.8 294.8
C35 C34 N33 H32 118.2 120.1
N33 C34 C35 H33 174.4 54.8
N33 C34 C35 H34 293.2 174.9
C42 C34 C35 H32 117.3 120.0
C35 C34 N33 H31 334.0 332.9
N33 C34 C35 H32 241.3 240.0
C34 C35 C36 C37 245.9 95.5
C36 C35 C34 H33 239.4 240.0
C36 C35 C34 H34 120.6 119.9
H33 C35 C34 H34 241.2 239.9
O13 P12 C15 H10 232.7 305.0
O13 P12 C15 H11 113.5 185.0
O13 P12 C1 H1 186.9 60.0
C2 C1 P12 H1 239.0 240.0
P12 C1 C2 H2 295.5 180.0
P12 C1 C2 H3 54.7 300.0
N11 C1 P12 H1 118.2 120.0
P12 C1 N11 H7 180.0 296.1
P12 C1 N11 H8 300.0 60.0
C41 C40 C39 H37 180.3 179.7
C41 C36 C35 H33 304.8 155.1
C41 C36 C35 H34 185.9 35.1
C41 C36 C37 H35 180.1 180.3
C40 C39 C38 H36 180.0 180.0
P12 C1 C2 H1 119.1 120.0
N11 C1 C2 H1 237.4 240.0
C2 C1 N11 H7 57.8 176.1
C2 C1 N11 H8 177.9 300.0
C1 C2 C3 C4 173.5 180.0
C3 C2 C1 H2 239.6 240.0
C3 C2 C1 H3 120.4 120.0
C1 C2 C3 H4 293.5 300.0
C1 C2 C3 H5 53.6 60.0
H2 C2 C1 H3 240.8 240.0
P12 C1 N11 H1 244.4 240.0
N11 C1 C2 C3 293.4 180.0
C2 C1 N11 H1 122.3 120.0
N11 C1 C2 H2 53.8 300.0
N11 C1 C2 H3 173.0 60.0
H7 N11 C1 H8 239.9 236.1
C36 C35 C34 H32 172.5 54.8
C34 C35 C36 H33 120.6 120.1
C34 C35 C36 H34 239.4 240.1
C35 C36 C37 C38 179.5 180.0
C35 C36 C37 H35 359.5 360.0
H33 C35 C36 H34 118.8 120.0
C3 C2 C1 N11 293.4 180.0
C3 C2 C1 H1 56.0 300.0
C1 C2 C3 H2 120.4 120.0
C1 C2 C3 H3 239.6 240.0
C2 C3 C4 C5 211.3 90.0
C4 C3 C2 H4 240.0 240.0
C4 C3 C2 H5 119.9 120.0
H2 C2 C3 H3 119.2 120.0
H4 C3 C2 H5 239.9 240.0
C37 C36 C35 H33 125.4 335.4
C37 C36 C35 H34 6.5 215.4
C38 C37 C36 H35 180.0 180.0
C36 C37 C38 H36 179.8 180.0
C39 C38 C37 H35 179.8 180.0
C37 C38 C39 H36 180.0 180.0
C9 C8 C7 H17 179.5 180.0
C9 C4 C3 H4 269.5 150.0
C9 C4 C3 H5 149.4 30.0
C9 C4 C5 H16 181.3 180.0
C4 C3 C2 H2 53.2 60.0
C4 C3 C2 H3 293.9 300.0
C2 C3 C4 H4 119.9 120.0
C2 C3 C4 H5 240.1 240.0
C3 C4 C5 H16 359.5 360.0
H4 C3 C4 H5 120.2 120.0
C8 C7 C6 H6 180.5 180.0
C36 C37 C38 H35 180.0 180.0
C39 C38 C37 H36 180.0 180.0
C5 C4 C3 H4 91.4 330.0
C5 C4 C3 H5 331.2 210.0
C4 C5 C6 H6 179.2 180.0
C5 C6 C7 H6 180.0 179.7
C3 C4 C5 C6 179.5 179.9
C7 C6 C5 H6 180.0 180.3
C2 C1 H1 N11 237.6 240.0
H1 C1 C2 C3 56.0 300.0
H1 C1 C2 H2 176.4 60.0
H1 C1 C2 H3 295.6 180.0
H1 C1 N11 H7 295.6 56.1
H1 C1 N11 H8 55.6 180.0
H2 C2 C1 N11 53.8 300.0
C1 C2 H2 C3 237.6 240.0
H2 C2 C1 H1 176.4 60.0
C1 C2 H2 H3 118.8 120.0
H2 C2 C3 C4 53.2 60.0
C3 C2 H2 H3 241.2 240.0
H2 C2 C3 H4 173.1 180.0
H2 C2 C3 H5 293.2 300.0
H3 C2 C1 N11 173.0 60.0
C1 C2 H3 C3 122.4 120.0
H3 C2 C1 H1 295.6 180.0
C1 C2 H3 H2 241.2 240.0
H3 C2 C3 C4 293.9 300.0
C3 C2 H3 H2 118.8 120.0
H3 C2 C3 H4 53.9 60.0
H3 C2 C3 H5 174.0 180.0
C2 C3 H4 C4 240.4 240.0
H4 C3 C2 H2 173.1 180.0
H4 C3 C2 H3 53.9 60.0
C2 C3 H4 H5 120.2 120.0
H4 C3 C4 C5 91.4 330.0
C4 C3 H4 H5 239.8 240.0
C2 C3 H5 C4 119.6 120.0
H5 C3 C2 H2 293.2 300.0
H5 C3 C2 H3 174.0 180.0
C2 C3 H5 H4 239.8 240.0
H5 C3 C4 C5 331.2 210.0
C4 C3 H5 H4 120.3 120.0
H7 N11 C1 H1 295.6 56.1
C1 N11 H7 H8 120.0 123.9
H8 N11 C1 H1 55.6 180.0
C1 N11 H8 H7 239.9 236.1
C16 C15 H10 P12 237.6 240.0
H10 C15 C16 C31 8.8 315.0
C16 C15 H10 H11 118.8 120.0
H10 C15 C16 H12 129.0 75.0
H10 C15 P12 O13 232.7 305.0
P12 C15 H10 H11 241.2 240.0
C16 C15 H11 P12 122.4 120.0
H11 C15 C16 C31 128.0 75.0
C16 C15 H11 H10 241.2 240.0
H11 C15 C16 H12 248.3 195.0
H11 C15 P12 O13 113.5 185.0
P12 C15 H11 H10 118.8 120.0
C17 C16 H12 C31 123.0 119.9
H12 C16 C15 P12 8.7 315.0
C15 C16 H12 C31 241.6 240.0
H12 C16 C15 H10 129.0 75.0
H12 C16 C15 H11 248.3 195.0
H12 C16 C31 N33 21.9 330.3
C18 C17 H13 H14 117.9 240.0
H13 C17 C16 C31 289.1 185.5
H13 C17 C16 H12 166.6 65.5
C18 C17 H14 H13 242.1 120.0
H14 C17 C16 C31 170.5 305.5
H14 C17 C16 H12 48.0 185.5
H15 C18 C17 H13 71.2 186.0
H15 C18 C17 H14 189.9 66.0
H15 C18 C19 C24 171.0 353.2
H15 C18 C19 C20 348.1 173.5
H16 C5 C6 H6 359.2 360.0
H17 C7 C6 H6 0.5 0.0
H18 C8 C7 H17 359.5 360.0
H19 C9 C8 H18 1.0 360.0
H21 C20 C19 C24 179.0 180.3
C19 C20 H21 C21 180.0 180.0
H21 C20 C21 C22 180.6 180.0
H21 C20 C21 H22 0.6 360.0
C20 C21 H22 C22 180.0 180.0
H22 C21 C20 H21 0.6 360.0
H22 C21 C22 H23 0.3 360.0
H23 C22 C21 H22 0.3 360.0
H24 C23 C22 H23 359.2 0.0
C19 C24 H25 C23 180.0 179.7
H25 C24 C23 H24 0.3 360.0
H27 C27 C26 H26 359.6 359.9
H28 C28 C27 H27 359.6 0.0
H28 C28 C29 C30 181.2 179.7
H28 C28 C29 H29 1.2 359.9
C28 C29 H29 C30 180.0 179.8
H29 C29 C28 H28 1.2 359.9
H29 C29 C30 H30 358.7 359.8
H30 C30 C29 H29 358.7 359.8
C31 N33 H31 C34 180.0 180.0
H31 N33 C34 C35 334.0 332.9
H31 N33 C34 H32 215.9 212.8
N33 C34 H32 C35 123.1 120.0
H32 C34 N33 H31 215.9 212.8
H32 C34 C35 C36 172.5 54.8
H32 C34 C35 H33 293.1 174.8
H32 C34 C35 H34 51.9 294.9
C34 C35 H33 C36 236.4 240.0
H33 C35 C34 H32 293.1 174.8
C34 C35 H33 H34 118.2 120.0
H33 C35 C36 C37 125.4 335.4
C36 C35 H33 H34 241.8 240.1
C34 C35 H34 C36 123.6 119.9
H34 C35 C34 H32 51.9 294.9
C34 C35 H34 H33 241.8 239.9
H34 C35 C36 C37 6.5 215.4
C36 C35 H34 H33 118.2 120.0
C36 C37 H35 C38 180.0 180.0
H35 C37 C38 H36 359.8 360.0
H36 C38 C37 H35 359.8 360.0
H37 C39 C38 H36 360.0 0.0
H38 C40 C39 H37 0.3 360.0
H39 C41 C40 H38 359.6 359.8