Atom Nomenclature for 7LZ

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 7LZ

Atom Name (V3) Atom Name (V2)
C1 C1
C2 C2
C3 C3
C4 C4
C5 C5
C6 C6
C7 C7
O7 O1
C8 C8
C9 C9
O1 O2
O9 O3
C10 C10
C11 C11
C12 C12
C13 C13
O13 O4
C14 C14
C15 C15
C16 C16
C17 C17
C18 C18
C19 C19
O19 O5
C20 C20
C21 C21
O21 O6
C22 C22
C23 C23
C24 C24
C25 C25
C26 C26
C61 C27
C27 C28
C28 C29
C29 C30
C30 C31
C31 C32
H2 H1
H3 H2
H4 H3
H5 H4
H6 H5
H7 H6
H71 H7
H81 H8
H82 H9
H9 H10
H91 H11
H10 H12
H11 H13
H12 H14
H13 H15
H57 H16
H14 H17
H56 H18
H54 H19
H16 H20
H53 H21
H52 H22
H49 H23
H48 H24
H19 H25
H47 H26
H20 H27
H21 H28
H22 H29
H23 H30
H24 H31
H25 H32
H27 H33
H28 H34
H29 H35
H30 H36
H31 H37
H32 H38
H33 H39
H34 H40
H35 H41
H36 H42
H37 H43
H38 H44
H39 H45
H40 H46
H41 H47
H42 H48
H43 H49
H44 H50
H45 H51
H46 H52