Atom Nomenclature for 7I1

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 7I1

Atom Name (V3) Atom Name (V2)
O2 O2
C14 C14
N1 N1
C15 C15
C16 C16
C25 C25
C24 C24
C23 C23
C22 C22
C21 C21
C20 C20
C19 C19
C18 C18
C17 C17
C2 C2
O O
C3 C3
C13 C13
C1 C1
C C
C7 C7
C6 C6
C5 C5
C4 C4
O1 O1
C8 C8
C12 C12
C11 C11
N N
C10 C10
C9 C9
H1 H1
H151 H151
H152 H152
H17 H17
H24 H24
H23 H23
H22 H22
H21 H21
H19 H19
H18 H18
H4 H4
HC1 HC1
HC2 HC2
HC3 HC3
H6 H6
H5 H5
H8 H8
H121 H121
H122 H122
H91C H91C
H92C H92C
H111 H111
H112 H112
H H
H101 H101
H102 H102