PDB Chemical Component 7HK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 7HK
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C21 |
O3 |
1.447 |
1.452 |
| O1 |
C1 |
1.203 |
1.208 |
| O3 |
C1 |
1.331 |
1.342 |
| C1 |
C2 |
1.503 |
1.508 |
| C2 |
C3 |
1.513 |
1.507 |
| C3 |
C20 |
1.390 |
1.381 |
| C3 |
C4 |
1.387 |
1.383 |
| C20 |
C19 |
1.393 |
1.391 |
| C4 |
C5 |
1.385 |
1.382 |
| O2 |
C18 |
1.232 |
1.216 |
| N4 |
C19 |
1.412 |
1.395 |
| N4 |
C18 |
1.348 |
1.324 |
| C19 |
C6 |
1.400 |
1.390 |
| C18 |
C17 |
1.499 |
1.464 |
| C16 |
C17 |
1.395 |
1.400 |
| C16 |
C15 |
1.381 |
1.374 |
| C5 |
C6 |
1.394 |
1.388 |
| C17 |
C7 |
1.412 |
1.405 |
| C6 |
N1 |
1.408 |
1.400 |
| C15 |
C9 |
1.388 |
1.394 |
| C7 |
N1 |
1.408 |
1.383 |
| C7 |
C8 |
1.393 |
1.385 |
| C9 |
C8 |
1.390 |
1.390 |
| C9 |
N2 |
1.417 |
1.391 |
| N2 |
C10 |
1.416 |
1.392 |
| C11 |
C10 |
1.390 |
1.395 |
| C11 |
C12 |
1.382 |
1.379 |
| C10 |
C14 |
1.389 |
1.395 |
| C12 |
N3 |
1.335 |
1.320 |
| C14 |
C13 |
1.384 |
1.379 |
| N3 |
C13 |
1.339 |
1.319 |
| N4 |
H14 |
1.000 |
0.970 |
| C5 |
H4 |
1.080 |
1.080 |
| C4 |
H3 |
1.080 |
1.080 |
| C20 |
H15 |
1.080 |
1.080 |
| C2 |
H1 |
1.100 |
1.091 |
| C2 |
H2 |
1.100 |
1.090 |
| C21 |
H212 |
1.100 |
1.090 |
| C21 |
H211 |
1.100 |
1.090 |
| C21 |
H213 |
1.099 |
1.089 |
| N1 |
H5 |
1.000 |
0.970 |
| C16 |
H13 |
1.080 |
1.080 |
| C15 |
H12 |
1.080 |
1.080 |
| C8 |
H6 |
1.080 |
1.080 |
| N2 |
H7 |
1.000 |
0.971 |
| C14 |
H11 |
1.080 |
1.081 |
| C13 |
H10 |
1.080 |
1.080 |
| C12 |
H9 |
1.080 |
1.080 |
| C11 |
H8 |
1.080 |
1.080 |
Bond Angles for 7HK
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C1 |
C2 |
H1 |
108.7 |
109.4 |
| C1 |
C2 |
H2 |
108.6 |
109.5 |
| C3 |
C20 |
H15 |
119.4 |
119.9 |
| C3 |
C4 |
H3 |
119.4 |
120.0 |
| C4 |
C5 |
H4 |
119.9 |
119.9 |
| O2 |
C18 |
C17 |
119.5 |
117.0 |
| N4 |
C19 |
C6 |
123.5 |
121.4 |
| C19 |
N4 |
H14 |
112.7 |
116.4 |
| N4 |
C18 |
C17 |
120.3 |
126.0 |
| C19 |
C6 |
N1 |
122.1 |
121.0 |
| C18 |
C17 |
C7 |
125.3 |
120.7 |
| C16 |
C15 |
C9 |
120.3 |
120.4 |
| C15 |
C16 |
H13 |
119.3 |
119.9 |
| C16 |
C15 |
H12 |
119.8 |
119.8 |
| C5 |
C6 |
N1 |
118.2 |
119.1 |
| C17 |
C7 |
N1 |
124.5 |
120.2 |
| C17 |
C7 |
C8 |
119.5 |
119.9 |
| C6 |
N1 |
C7 |
123.3 |
119.2 |
| C6 |
N1 |
H5 |
118.3 |
120.5 |
| C15 |
C9 |
C8 |
119.1 |
120.1 |
| C15 |
C9 |
N2 |
122.2 |
120.0 |
| C9 |
C15 |
H12 |
119.9 |
119.8 |
| N1 |
C7 |
C8 |
116.0 |
119.9 |
| C7 |
N1 |
H5 |
118.4 |
120.3 |
| C7 |
C8 |
C9 |
121.1 |
120.0 |
| C7 |
C8 |
H6 |
119.4 |
120.0 |
| C8 |
C9 |
N2 |
118.7 |
120.0 |
| C9 |
C8 |
H6 |
119.4 |
120.0 |
| C9 |
N2 |
C10 |
129.6 |
120.0 |
| C9 |
N2 |
H7 |
115.2 |
120.0 |
| N2 |
C10 |
C14 |
118.6 |
120.9 |
| C10 |
N2 |
H7 |
115.2 |
120.0 |
| C11 |
C12 |
H9 |
118.1 |
119.6 |
| C10 |
C14 |
C13 |
118.2 |
119.1 |
| C10 |
C14 |
H11 |
120.9 |
120.5 |
| C13 |
C14 |
H11 |
120.9 |
120.4 |
| C14 |
C13 |
H10 |
118.1 |
119.6 |
| N3 |
C13 |
H10 |
118.0 |
119.6 |
| H1 |
C2 |
H2 |
109.4 |
109.5 |
| H212 |
C21 |
H211 |
109.5 |
109.4 |
| H212 |
C21 |
H213 |
109.5 |
109.5 |
| H211 |
C21 |
H213 |
109.5 |
109.5 |
Torsion Angles for 7HK
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C1 |
C2 |
H1 |
259.6 |
240.0 |
| O1 |
C1 |
C2 |
H2 |
18.6 |
120.0 |
| O3 |
C1 |
C2 |
H1 |
79.4 |
60.0 |
| O3 |
C1 |
C2 |
H2 |
198.3 |
300.0 |
| H1 |
C2 |
C1 |
H2 |
241.0 |
120.0 |
| C2 |
C3 |
C20 |
H15 |
5.8 |
359.8 |
| C2 |
C3 |
C4 |
H3 |
354.0 |
1.0 |
| C20 |
C3 |
C4 |
H3 |
177.4 |
180.9 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
180.1 |
| C20 |
C19 |
N4 |
H14 |
331.8 |
320.2 |
| C20 |
C19 |
C6 |
N1 |
169.7 |
183.8 |
| C4 |
C5 |
C6 |
N1 |
189.9 |
177.0 |
| N4 |
C18 |
O2 |
C17 |
179.4 |
180.3 |
| O2 |
C18 |
C17 |
C7 |
209.5 |
219.1 |
| C19 |
N4 |
C18 |
C17 |
7.1 |
1.7 |
| N4 |
C19 |
C6 |
N1 |
348.1 |
4.2 |
| O2 |
C18 |
N4 |
C17 |
180.6 |
179.7 |
| N4 |
C18 |
C17 |
C7 |
30.1 |
38.8 |
| C6 |
C19 |
N4 |
H14 |
153.4 |
139.8 |
| C5 |
C6 |
C19 |
N1 |
187.4 |
178.7 |
| C19 |
C6 |
N1 |
C7 |
55.8 |
61.5 |
| C19 |
C6 |
N1 |
H5 |
235.8 |
241.5 |
| C18 |
C17 |
C7 |
N1 |
345.5 |
354.7 |
| C18 |
C17 |
C7 |
C8 |
166.6 |
176.5 |
| C16 |
C17 |
C7 |
C8 |
355.9 |
357.0 |
| C16 |
C15 |
C9 |
C8 |
357.2 |
358.9 |
| C16 |
C15 |
C9 |
N2 |
175.8 |
178.9 |
| C9 |
C15 |
C16 |
H12 |
180.0 |
180.0 |
| C19 |
C6 |
C5 |
N1 |
172.9 |
181.2 |
| C5 |
C6 |
N1 |
C7 |
228.5 |
242.7 |
| C5 |
C6 |
N1 |
H5 |
48.5 |
62.7 |
| C6 |
N1 |
C7 |
C17 |
319.7 |
300.7 |
| N1 |
C7 |
C17 |
C8 |
179.0 |
178.2 |
| C17 |
C7 |
N1 |
H5 |
139.7 |
120.7 |
| C17 |
C7 |
C8 |
C9 |
1.2 |
2.1 |
| C17 |
C7 |
C8 |
H6 |
181.2 |
182.1 |
| C17 |
C7 |
N1 |
C6 |
319.7 |
300.7 |
| C6 |
N1 |
C7 |
C8 |
138.7 |
118.9 |
| C7 |
N1 |
C6 |
H5 |
180.0 |
180.0 |
| C9 |
C15 |
C16 |
H13 |
179.8 |
180.3 |
| C16 |
C15 |
C9 |
H12 |
180.0 |
180.0 |
| C7 |
C8 |
C9 |
C15 |
2.3 |
359.9 |
| C8 |
C9 |
C15 |
N2 |
181.5 |
180.0 |
| C15 |
C9 |
C8 |
H6 |
182.3 |
179.9 |
| C15 |
C9 |
N2 |
C10 |
331.8 |
329.6 |
| C15 |
C9 |
N2 |
H7 |
151.8 |
149.7 |
| C17 |
C7 |
N1 |
C8 |
181.0 |
181.8 |
| C6 |
N1 |
C7 |
H5 |
180.0 |
180.0 |
| N1 |
C7 |
C8 |
C9 |
182.1 |
183.9 |
| N1 |
C7 |
C8 |
H6 |
2.1 |
3.9 |
| C17 |
C7 |
C8 |
N1 |
179.1 |
178.2 |
| C15 |
C9 |
C8 |
C7 |
2.3 |
359.9 |
| C8 |
C7 |
N1 |
H5 |
318.7 |
298.9 |
| C7 |
C8 |
C9 |
N2 |
183.7 |
179.9 |
| C9 |
C8 |
C7 |
H6 |
180.0 |
180.0 |
| C15 |
C9 |
C8 |
N2 |
178.6 |
180.0 |
| C8 |
C9 |
C15 |
H12 |
177.2 |
178.9 |
| C7 |
C8 |
C9 |
H6 |
180.0 |
180.0 |
| C8 |
C9 |
N2 |
C10 |
150.3 |
149.6 |
| C8 |
C9 |
N2 |
H7 |
330.3 |
329.7 |
| C15 |
C9 |
N2 |
C8 |
181.5 |
180.0 |
| N2 |
C9 |
C15 |
H12 |
355.8 |
358.8 |
| N2 |
C9 |
C8 |
H6 |
3.7 |
359.9 |
| C9 |
N2 |
C10 |
C14 |
161.7 |
150.7 |
| C10 |
N2 |
C9 |
H7 |
180.0 |
179.9 |
| C9 |
N2 |
C10 |
H7 |
180.0 |
180.1 |
| N2 |
C10 |
C14 |
C13 |
183.8 |
180.0 |
| N2 |
C10 |
C14 |
H11 |
3.8 |
0.1 |
| C11 |
C10 |
N2 |
H7 |
163.8 |
150.4 |
| C11 |
C10 |
C14 |
H11 |
181.7 |
180.3 |
| C14 |
C10 |
N2 |
H7 |
341.7 |
330.6 |
| C13 |
C14 |
C10 |
H11 |
180.0 |
179.9 |
| C10 |
C14 |
C13 |
H10 |
180.3 |
180.0 |
| C12 |
N3 |
C13 |
H10 |
178.8 |
180.0 |
| C10 |
C14 |
C13 |
H11 |
180.0 |
180.1 |
| N3 |
C13 |
C14 |
H10 |
180.0 |
180.1 |
| N3 |
C13 |
C14 |
H11 |
180.3 |
180.0 |
| C14 |
C13 |
N3 |
H10 |
180.0 |
179.9 |
| H14 |
N4 |
C19 |
C6 |
153.4 |
139.8 |
| H14 |
N4 |
C18 |
C17 |
187.1 |
181.7 |
| H4 |
C5 |
C6 |
N1 |
9.9 |
356.9 |
| H3 |
C4 |
C5 |
H4 |
360.0 |
0.1 |
| C1 |
C2 |
H1 |
H2 |
118.5 |
240.0 |
| C1 |
C2 |
H2 |
H1 |
241.5 |
120.0 |
| H211 |
C21 |
H212 |
H213 |
120.0 |
120.0 |
| H212 |
C21 |
H211 |
H213 |
240.0 |
240.0 |
| H212 |
C21 |
H213 |
H211 |
120.0 |
120.0 |
| C6 |
N1 |
H5 |
C7 |
180.0 |
180.0 |
| H5 |
N1 |
C7 |
C8 |
318.7 |
298.9 |
| H13 |
C16 |
C15 |
C9 |
179.8 |
180.3 |
| H13 |
C16 |
C15 |
H12 |
359.7 |
0.3 |
| C16 |
C15 |
H12 |
C9 |
180.0 |
180.0 |
| H12 |
C15 |
C16 |
H13 |
359.7 |
0.3 |
| H12 |
C15 |
C9 |
C8 |
177.2 |
178.9 |
| H12 |
C15 |
C9 |
N2 |
355.8 |
358.8 |
| C7 |
C8 |
H6 |
C9 |
180.0 |
180.0 |
| H6 |
C8 |
C9 |
N2 |
3.7 |
359.9 |
| C9 |
N2 |
H7 |
C10 |
180.0 |
179.9 |
| H7 |
N2 |
C10 |
C14 |
341.7 |
330.6 |
| C10 |
C14 |
H11 |
C13 |
180.0 |
179.9 |
| H11 |
C14 |
C13 |
H10 |
0.3 |
360.0 |
| H10 |
C13 |
C14 |
H11 |
0.3 |
360.0 |
| H8 |
C11 |
C12 |
H9 |
2.0 |
0.0 |