PDB Chemical Component 7GP

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 7GP

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.546	1.530
C1	O5	1.483	1.426
C1	N1	1.439	1.464
C1	H1	1.100	1.090
C2	O2	1.454	1.429
C2	C3	1.553	1.533
C2	H2	1.100	1.090
O2	HO2	0.950	0.967
C3	O3	1.440	1.430
C3	C4	1.533	1.533
C3	H3	1.100	1.090
O3	HO3	0.950	0.966
C4	O4	1.429	1.429
C4	C5	1.586	1.530
C4	H4	1.100	1.090
O4	HO4	0.950	0.967
C5	O5	1.456	1.427
C5	C6	1.546	1.530
C5	H5	1.100	1.090
C6	O6	1.444	1.429
C6	H61	1.100	1.090
C6	H62	1.100	1.090
O6	HO6	0.950	0.967
N1	C7	1.345	1.348
N1	HN1	1.000	0.970
C7	O7	1.244	1.214
C7	C8	1.466	1.494
C8	O8	1.240	1.213
C8	O9	1.376	1.346
C9	O9	1.480	1.452
C9	C10	1.550	1.530
C9	H91	1.100	1.090
C9	H92	1.100	1.090
C10	H101	1.100	1.090
C10	H102	1.100	1.091
C10	H103	1.100	1.090

Bond Angles for 7GP

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	111.6	109.8
C2	C1	N1	107.6	109.4
C2	C1	H1	109.5	109.4
C1	C2	O2	109.0	109.6
C1	C2	C3	107.9	109.0
C1	C2	H2	111.2	109.6
O5	C1	N1	110.1	109.4
O5	C1	H1	107.0	109.4
C1	O5	C5	110.9	107.6
N1	C1	H1	111.0	109.4
C1	N1	C7	120.6	120.0
C1	N1	HN1	119.7	120.0
O2	C2	C3	110.7	109.5
O2	C2	H2	108.5	109.6
C2	O2	HO2	109.5	106.8
C3	C2	H2	109.5	109.5
C2	C3	O3	109.0	109.7
C2	C3	C4	108.5	108.6
C2	C3	H3	110.6	109.7
O3	C3	C4	109.8	109.6
O3	C3	H3	109.2	109.6
C3	O3	HO3	109.5	106.8
C4	C3	H3	109.8	109.6
C3	C4	O4	108.0	109.6
C3	C4	C5	108.7	109.0
C3	C4	H4	111.3	109.6
O4	C4	C5	110.4	109.6
O4	C4	H4	109.6	109.5
C4	O4	HO4	109.5	106.8
C5	C4	H4	108.9	109.5
C4	C5	O5	109.7	109.8
C4	C5	C6	111.8	109.4
C4	C5	H5	107.1	109.4
O5	C5	C6	107.4	109.4
O5	C5	H5	111.5	109.4
C6	C5	H5	109.3	109.4
C5	C6	O6	110.0	109.4
C5	C6	H61	109.2	109.4
C5	C6	H62	109.3	109.5
O6	C6	H61	109.2	109.5
O6	C6	H62	109.3	109.5
C6	O6	HO6	109.5	106.8
H61	C6	H62	109.9	109.5
C7	N1	HN1	119.7	120.0
N1	C7	O7	123.2	120.0
N1	C7	C8	118.1	120.0
O7	C7	C8	118.7	120.0
C7	C8	O8	116.3	120.0
C7	C8	O9	118.5	120.0
O8	C8	O9	125.2	120.0
C8	O9	C9	117.5	120.0
O9	C9	C10	108.1	109.4
O9	C9	H91	110.2	109.5
O9	C9	H92	109.9	109.4
C10	C9	H91	110.2	109.5
C10	C9	H92	109.9	109.5
C9	C10	H101	109.5	109.5
C9	C10	H102	109.5	109.5
C9	C10	H103	109.5	109.5
H91	C9	H92	108.4	109.5
H101	C10	H102	109.5	109.5
H101	C10	H103	109.4	109.5
H102	C10	H103	109.5	109.4

Torsion Angles for 7GP

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	N1	239.1	239.9
O5	C1	C2	H1	118.3	120.1
C2	C1	O5	C5	299.3	292.4
N1	C1	C2	H1	239.2	240.2
C2	C1	N1	C7	145.8	144.9
C2	C1	N1	HN1	325.8	324.8
O2	C2	C1	C3	120.3	119.8
O2	C2	C1	H2	240.5	239.7
C1	C2	O2	HO2	9.8	60.5
C3	C2	C1	H2	120.2	119.9
C1	C2	C3	O3	181.2	186.4
C1	C2	C3	C4	300.8	306.2
C1	C2	C3	H3	61.1	66.0
C2	C1	O5	N1	119.5	120.1
C2	C1	O5	H1	240.2	240.0
O5	C1	C2	O2	179.5	181.2
O5	C1	C2	C3	59.2	61.3
O5	C1	C2	H2	299.0	301.5
N1	C1	O5	H1	120.8	119.9
O5	C1	N1	C7	267.7	265.2
O5	C1	N1	HN1	87.7	85.1
C4	C5	O5	C1	59.7	67.6
C1	O5	C5	C6	181.4	187.6
C1	O5	C5	H5	301.2	307.5
C2	C1	N1	O5	238.1	239.7
C2	C1	N1	H1	119.8	119.8
N1	C1	C2	O2	300.4	301.3
N1	C1	C2	C3	180.2	181.4
N1	C1	C2	H2	60.0	61.6
O5	C1	N1	H1	241.7	240.1
N1	C1	O5	C5	179.8	172.3
C7	N1	C1	HN1	180.0	180.1
C1	N1	C7	O7	0.3	359.9
C1	N1	C7	C8	180.8	180.0
C2	C1	H1	O5	121.1	120.3
C2	C1	H1	N1	241.3	240.2
H1	C1	C2	O2	61.2	61.1
H1	C1	C2	C3	300.9	301.3
H1	C1	C2	H2	180.7	181.4
O5	C1	H1	N1	120.2	119.9
H1	C1	O5	C5	59.1	52.4
H1	C1	N1	C7	26.0	25.1
H1	C1	N1	HN1	206.0	205.0
O2	C2	C1	O5	179.5	181.2
O2	C2	C1	N1	300.4	301.3
O2	C2	C1	H1	61.2	61.1
C1	C2	O2	C3	241.5	240.5
C1	C2	O2	H2	121.3	120.3
C3	C2	O2	H2	239.8	239.8
O2	C2	C3	O3	62.0	66.6
O2	C2	C3	C4	181.6	186.4
O2	C2	C3	H3	302.0	306.1
C3	C2	C1	O5	59.2	61.3
C3	C2	C1	N1	180.2	181.4
C3	C2	C1	H1	300.9	301.3
C1	C2	C3	O2	119.2	119.9
C1	C2	C3	H2	238.7	240.1
O2	C2	C3	H2	119.6	120.2
C3	C2	O2	HO2	128.4	180.0
O3	C3	C2	C4	240.5	240.2
O3	C3	C2	H3	120.1	120.4
C2	C3	O3	HO3	206.4	299.2
C4	C3	C2	H3	239.6	240.2
C2	C3	C4	O4	179.6	173.7
C2	C3	C4	C5	59.8	53.7
C2	C3	C4	H4	299.9	293.9
H2	C2	C1	O5	299.0	301.5
H2	C2	C1	N1	60.0	61.6
H2	C2	C1	H1	180.7	181.4
C1	C2	H2	O2	240.1	239.7
C1	C2	H2	C3	119.2	119.5
O2	C2	H2	C3	239.1	239.8
H2	C2	O2	HO2	248.6	300.2
H2	C2	C3	O3	302.5	306.3
H2	C2	C3	C4	62.0	66.1
H2	C2	C3	H3	182.4	185.9
HO2	O2	C2	C3	128.4	180.0
HO2	O2	C2	H2	248.6	300.2
O3	C3	C2	H2	302.5	306.3
C2	C3	O3	C4	118.7	119.2
C2	C3	O3	H3	239.1	239.5
C4	C3	O3	H3	120.4	120.3
O3	C3	C4	O4	298.6	293.6
O3	C3	C4	C5	178.8	173.6
O3	C3	C4	H4	58.9	53.7
C4	C3	C2	H2	62.0	66.1
C2	C3	C4	O3	241.0	240.1
C2	C3	C4	H3	120.9	119.8
O3	C3	C4	H3	239.9	239.7
C4	C3	O3	HO3	87.7	180.0
O4	C4	C3	C5	119.7	120.0
O4	C4	C3	H4	239.7	239.8
C3	C4	O4	HO4	255.9	60.4
C5	C4	C3	H4	119.9	119.9
C3	C4	C5	O5	299.8	298.8
C3	C4	C5	C6	180.7	178.7
C3	C4	C5	H5	61.0	58.9
H3	C3	C2	H2	182.4	185.9
C2	C3	H3	O3	119.9	120.5
C2	C3	H3	C4	240.4	240.8
O3	C3	H3	C4	120.4	120.3
H3	C3	O3	HO3	327.3	59.7
H3	C3	C4	O4	58.7	53.9
H3	C3	C4	C5	298.9	293.9
H3	C3	C4	H4	179.0	174.1
HO3	O3	C3	C4	87.7	180.0
HO3	O3	C3	H3	327.3	59.7
O4	C4	C3	H3	58.7	53.9
C3	C4	O4	C5	241.3	240.4
C3	C4	O4	H4	121.4	120.2
C5	C4	O4	H4	240.0	239.8
O4	C4	C5	O5	181.5	178.8
O4	C4	C5	C6	62.5	58.7
O4	C4	C5	H5	302.7	298.9
C1	O5	C5	C4	59.7	67.6
C5	C4	C3	H3	298.9	293.9
C3	C4	C5	O4	118.2	120.0
C3	C4	C5	H4	238.6	240.1
O4	C4	C5	H4	120.4	120.1
C5	C4	O4	HO4	14.5	180.0
O5	C5	C4	C6	119.1	120.1
O5	C5	C4	H5	238.8	239.9
C6	C5	C4	H5	119.8	119.8
C4	C5	C6	O6	49.5	185.3
C4	C5	C6	H61	289.7	305.3
C4	C5	C6	H62	169.5	65.3
H4	C4	C3	H3	179.0	174.1
C3	C4	H4	O4	240.6	239.7
C3	C4	H4	C5	119.8	119.6
O4	C4	H4	C5	239.1	239.8
H4	C4	O4	HO4	134.5	300.2
H4	C4	C5	O5	61.1	58.7
H4	C4	C5	C6	302.1	298.6
H4	C4	C5	H5	182.3	178.7
HO4	O4	C4	C5	14.5	180.0
HO4	O4	C4	H4	134.5	300.2
C5	O5	C1	N1	179.8	172.3
C5	O5	C1	H1	59.1	52.4
O5	C5	C4	H4	61.1	58.7
C4	C5	O5	C6	238.2	239.9
C4	C5	O5	H5	118.5	120.1
C6	C5	O5	H5	240.2	240.1
O5	C5	C6	O6	289.1	65.0
O5	C5	C6	H61	169.3	185.0
O5	C5	C6	H62	49.1	305.0
C6	C5	C4	H4	302.1	298.6
C4	C5	C6	O5	120.4	120.3
C4	C5	C6	H5	241.6	240.2
O5	C5	C6	H5	121.2	119.9
O6	C6	C5	H61	119.8	240.0
O6	C6	C5	H62	240.0	120.0
C5	C6	O6	HO6	283.5	180.0
H61	C6	C5	H62	120.2	240.0
H5	C5	C4	H4	182.3	178.7
C4	C5	H5	O5	240.0	239.7
C4	C5	H5	C6	121.3	119.8
O5	C5	H5	C6	241.4	240.1
H5	C5	C6	O6	167.9	305.1
H5	C5	C6	H61	48.1	65.1
H5	C5	C6	H62	287.9	185.1
O6	C6	C5	H5	167.9	305.1
C5	C6	O6	H61	240.2	119.9
C5	C6	O6	H62	120.0	240.0
H61	C6	O6	H62	239.8	120.1
H61	C6	C5	H5	48.1	65.1
C5	C6	H61	O6	120.3	240.1
C5	C6	H61	H62	240.1	120.0
O6	C6	H61	H62	119.9	239.9
H61	C6	O6	HO6	43.3	60.1
H62	C6	C5	H5	287.9	185.1
C5	C6	H62	O6	239.6	120.0
C5	C6	H62	H61	119.8	240.0
O6	C6	H62	H61	240.2	120.1
H62	C6	O6	HO6	163.5	300.0
HO6	O6	C6	H61	43.3	60.1
HO6	O6	C6	H62	163.5	300.0
C7	N1	C1	H1	26.0	25.1
C1	N1	C7	HN1	180.0	179.9
O7	C7	N1	C8	179.5	179.9
N1	C7	C8	O8	152.7	359.9
N1	C7	C8	O9	333.2	180.0
HN1	N1	C1	H1	206.0	205.0
C1	N1	HN1	C7	180.0	180.1
HN1	N1	C7	O7	180.2	180.0
HN1	N1	C7	C8	0.7	0.1
O7	C7	N1	HN1	180.2	180.0
N1	C7	O7	C8	180.5	180.1
O7	C7	C8	O8	333.2	180.0
O7	C7	C8	O9	153.7	0.1
C8	C7	N1	HN1	0.7	0.1
N1	C7	C8	O7	179.5	179.9
O8	C8	C7	O9	179.5	179.9
C7	C8	O9	C9	179.4	180.0
C7	C8	O8	O9	180.5	180.1
O8	C8	O9	C9	360.0	0.1
C7	C8	O9	O8	179.4	179.9
C8	O9	C9	C10	99.8	180.0
C8	O9	C9	H91	220.3	60.0
C8	O9	C9	H92	339.8	299.9
C10	C9	O9	H91	239.5	120.0
C10	C9	O9	H92	120.0	240.1
O9	C9	C10	H101	290.3	60.0
O9	C9	C10	H102	170.2	180.0
O9	C9	C10	H103	50.2	300.0
H91	C9	O9	H92	240.5	120.1
O9	C9	C10	H91	120.5	240.0
O9	C9	C10	H92	240.0	119.9
H91	C9	C10	H92	119.5	239.9
H101	C10	C9	H102	120.0	240.0
H101	C10	C9	H103	240.0	120.0
H102	C10	C9	H103	120.0	240.1
O9	C9	H91	C10	240.7	120.0
O9	C9	H91	H92	120.4	240.0
C10	C9	H91	H92	239.6	120.0
H91	C9	C10	H101	169.7	180.0
H91	C9	C10	H102	49.7	300.0
H91	C9	C10	H103	289.7	60.0
O9	C9	H92	C10	118.9	240.1
O9	C9	H92	H91	239.4	120.0
C10	C9	H92	H91	120.6	240.0
H92	C9	C10	H101	50.3	300.1
H92	C9	C10	H102	290.2	60.1
H92	C9	C10	H103	170.2	180.0
H101	C10	C9	H91	169.7	180.0
H101	C10	C9	H92	50.3	300.1
C9	C10	H101	H102	240.0	120.0
C9	C10	H101	H103	120.0	240.0
H102	C10	H101	H103	240.0	120.0
H102	C10	C9	H91	49.7	300.0
H102	C10	C9	H92	290.2	60.1
C9	C10	H102	H101	120.0	240.0
C9	C10	H102	H103	240.0	120.0
H101	C10	H102	H103	120.0	240.0
H103	C10	C9	H91	289.7	60.0
H103	C10	C9	H92	170.2	180.0
C9	C10	H103	H101	240.0	120.0
C9	C10	H103	H102	120.0	240.0
H101	C10	H103	H102	240.0	120.0