PDB Chemical Component 7GK
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 7GK
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
NAT |
CAS |
1.476 |
1.469 |
NAT |
CAU |
1.477 |
1.470 |
CAS |
CAR |
1.520 |
1.530 |
CAU |
CAV |
1.521 |
1.531 |
CAR |
NAQ |
1.468 |
1.470 |
CAV |
NAQ |
1.468 |
1.470 |
NAQ |
CAN |
1.338 |
1.395 |
CAN |
CAO |
1.390 |
1.391 |
CAN |
CAM |
1.389 |
1.391 |
CAO |
CAP |
1.390 |
1.378 |
CAM |
CAL |
1.390 |
1.377 |
CAP |
CAJ |
1.390 |
1.396 |
CAL |
CAJ |
1.390 |
1.397 |
CAJ |
CAH |
1.329 |
1.478 |
CAH |
CAI |
1.326 |
1.357 |
CAH |
NAG |
1.324 |
1.377 |
CAI |
CAE |
1.332 |
1.412 |
NAG |
CAF |
1.330 |
1.377 |
CAE |
CAF |
1.338 |
1.410 |
CAE |
CAD |
1.333 |
1.413 |
CAF |
NAC |
1.341 |
1.325 |
NAW |
CAK |
1.133 |
1.136 |
CAK |
CAD |
1.427 |
1.431 |
CAD |
CAA |
1.388 |
1.398 |
NAC |
CAB |
1.396 |
1.317 |
CAA |
CAB |
1.385 |
1.383 |
CAR |
H1 |
1.100 |
1.090 |
CAR |
H2 |
1.100 |
1.090 |
CAS |
H3 |
1.100 |
1.090 |
CAS |
H4 |
1.100 |
1.091 |
NAT |
H5 |
1.000 |
1.010 |
CAU |
H7 |
1.100 |
1.090 |
CAU |
H8 |
1.100 |
1.090 |
CAV |
H9 |
1.100 |
1.090 |
CAV |
H10 |
1.100 |
1.090 |
CAO |
H11 |
1.079 |
1.080 |
CAP |
H12 |
1.080 |
1.080 |
CAM |
H13 |
1.080 |
1.080 |
CAL |
H14 |
1.080 |
1.081 |
CAI |
H15 |
1.080 |
1.080 |
CAA |
H16 |
1.080 |
1.079 |
CAB |
H17 |
1.080 |
1.080 |
NAG |
H18 |
1.000 |
0.970 |
Bond Angles for 7GK
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAT |
CAS |
H3 |
108.6 |
109.5 |
NAT |
CAS |
H4 |
108.5 |
109.5 |
NAT |
CAU |
CAV |
113.0 |
109.4 |
CAU |
NAT |
H5 |
110.7 |
111.0 |
NAT |
CAU |
H7 |
108.6 |
109.5 |
NAT |
CAU |
H8 |
108.6 |
109.5 |
CAS |
CAR |
NAQ |
109.7 |
109.4 |
CAS |
CAR |
H1 |
109.4 |
109.5 |
CAS |
CAR |
H2 |
109.4 |
109.5 |
CAU |
CAV |
NAQ |
109.7 |
109.3 |
CAV |
CAU |
H7 |
108.6 |
109.5 |
CAV |
CAU |
H8 |
108.6 |
109.5 |
CAU |
CAV |
H9 |
109.4 |
109.5 |
CAU |
CAV |
H10 |
109.4 |
109.5 |
CAR |
NAQ |
CAV |
111.7 |
110.9 |
CAR |
NAQ |
CAN |
122.9 |
111.0 |
NAQ |
CAR |
H1 |
109.4 |
109.5 |
NAQ |
CAR |
H2 |
109.4 |
109.5 |
CAV |
NAQ |
CAN |
122.8 |
111.0 |
NAQ |
CAV |
H9 |
109.4 |
109.5 |
NAQ |
CAV |
H10 |
109.4 |
109.5 |
NAQ |
CAN |
CAO |
120.1 |
119.9 |
NAQ |
CAN |
CAM |
119.9 |
120.0 |
CAO |
CAN |
CAM |
120.0 |
120.1 |
CAN |
CAO |
CAP |
120.0 |
120.1 |
CAN |
CAO |
H11 |
120.0 |
119.9 |
CAN |
CAM |
CAL |
120.0 |
120.1 |
CAN |
CAM |
H13 |
120.0 |
119.9 |
CAO |
CAP |
CAJ |
120.0 |
119.9 |
CAP |
CAO |
H11 |
120.0 |
120.0 |
CAO |
CAP |
H12 |
120.0 |
120.0 |
CAM |
CAL |
CAJ |
120.0 |
119.9 |
CAL |
CAM |
H13 |
120.0 |
120.0 |
CAM |
CAL |
H14 |
120.0 |
120.0 |
CAP |
CAJ |
CAL |
120.0 |
119.8 |
CAP |
CAJ |
CAH |
120.3 |
120.1 |
CAJ |
CAP |
H12 |
120.0 |
120.1 |
CAL |
CAJ |
CAH |
119.8 |
120.1 |
CAJ |
CAL |
H14 |
120.0 |
120.0 |
CAJ |
CAH |
CAI |
125.2 |
125.4 |
CAJ |
CAH |
NAG |
124.7 |
125.3 |
CAI |
CAH |
NAG |
110.0 |
109.3 |
CAH |
CAI |
CAE |
106.7 |
107.7 |
CAH |
CAI |
H15 |
126.6 |
126.2 |
CAH |
NAG |
CAF |
106.8 |
108.9 |
CAH |
NAG |
H18 |
126.6 |
125.5 |
CAI |
CAE |
CAF |
108.2 |
107.1 |
CAI |
CAE |
CAD |
130.8 |
133.8 |
CAE |
CAI |
H15 |
126.6 |
126.1 |
CAD |
CAE |
CAF |
121.1 |
119.1 |
CAE |
CAF |
NAC |
121.0 |
120.1 |
CAE |
CAD |
CAA |
120.5 |
117.7 |
CAK |
CAD |
CAA |
119.6 |
121.2 |
CAD |
CAA |
CAB |
118.8 |
119.3 |
CAD |
CAA |
H16 |
120.6 |
120.3 |
NAC |
CAB |
H17 |
120.9 |
119.1 |
CAB |
CAA |
H16 |
120.6 |
120.4 |
CAA |
CAB |
H17 |
120.8 |
119.1 |
H1 |
CAR |
H2 |
109.5 |
109.5 |
H3 |
CAS |
H4 |
109.5 |
109.5 |
H7 |
CAU |
H8 |
109.5 |
109.5 |
H9 |
CAV |
H10 |
109.5 |
109.5 |
Torsion Angles for 7GK
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
NAT |
CAS |
CAR |
NAQ |
59.4 |
58.4 |
NAT |
CAS |
CAR |
H1 |
179.4 |
178.4 |
NAT |
CAS |
CAR |
H2 |
299.4 |
298.4 |
H3 |
CAS |
NAT |
H4 |
241.0 |
120.0 |
CAU |
NAT |
CAS |
H3 |
59.8 |
180.7 |
CAU |
NAT |
CAS |
H4 |
178.7 |
60.7 |
NAT |
CAU |
CAV |
NAQ |
300.6 |
301.6 |
CAV |
CAU |
NAT |
H7 |
239.5 |
240.1 |
CAV |
CAU |
NAT |
H8 |
120.6 |
120.0 |
NAT |
CAU |
CAV |
H9 |
60.6 |
61.6 |
NAT |
CAU |
CAV |
H10 |
180.6 |
181.6 |
H7 |
CAU |
NAT |
H8 |
241.1 |
239.9 |
CAS |
CAR |
NAQ |
CAV |
306.1 |
300.7 |
CAS |
CAR |
NAQ |
CAN |
143.8 |
176.9 |
NAQ |
CAR |
CAS |
H1 |
240.0 |
240.0 |
NAQ |
CAR |
CAS |
H2 |
120.0 |
120.0 |
H1 |
CAR |
CAS |
H2 |
240.1 |
239.9 |
CAV |
CAU |
NAT |
H5 |
301.6 |
295.5 |
NAT |
CAU |
CAV |
H7 |
120.5 |
120.0 |
NAT |
CAU |
CAV |
H8 |
239.5 |
240.0 |
CAR |
NAQ |
CAV |
CAU |
53.9 |
59.3 |
CAU |
CAV |
NAQ |
CAN |
216.3 |
183.2 |
NAQ |
CAV |
CAU |
H9 |
240.0 |
240.0 |
NAQ |
CAV |
CAU |
H10 |
120.0 |
120.0 |
H7 |
CAU |
CAV |
H8 |
119.0 |
120.1 |
H9 |
CAV |
CAU |
H10 |
240.1 |
239.9 |
CAS |
CAR |
NAQ |
H1 |
120.0 |
120.0 |
CAS |
CAR |
NAQ |
H2 |
240.0 |
240.0 |
CAU |
CAV |
NAQ |
CAR |
53.9 |
59.3 |
CAV |
NAQ |
CAR |
CAN |
162.4 |
123.8 |
CAR |
NAQ |
CAV |
H9 |
293.9 |
299.4 |
CAR |
NAQ |
CAV |
H10 |
174.0 |
179.3 |
CAR |
NAQ |
CAN |
CAO |
340.4 |
180.0 |
CAR |
NAQ |
CAN |
CAM |
160.4 |
359.7 |
H1 |
CAR |
NAQ |
H2 |
119.9 |
120.0 |
NAQ |
CAV |
CAU |
H7 |
180.1 |
181.6 |
NAQ |
CAV |
CAU |
H8 |
61.1 |
61.6 |
CAU |
CAV |
NAQ |
H9 |
120.0 |
120.0 |
CAU |
CAV |
NAQ |
H10 |
240.0 |
240.1 |
CAR |
NAQ |
CAV |
CAN |
197.6 |
236.2 |
CAV |
NAQ |
CAR |
H1 |
186.1 |
180.7 |
CAV |
NAQ |
CAR |
H2 |
66.2 |
60.7 |
CAV |
NAQ |
CAN |
CAO |
180.0 |
56.3 |
CAV |
NAQ |
CAN |
CAM |
0.0 |
235.9 |
H9 |
CAV |
NAQ |
H10 |
119.9 |
120.1 |
CAR |
NAQ |
CAN |
CAV |
160.4 |
123.8 |
CAN |
NAQ |
CAR |
H1 |
23.7 |
56.9 |
CAN |
NAQ |
CAR |
H2 |
263.8 |
296.9 |
CAN |
NAQ |
CAV |
H9 |
96.3 |
63.2 |
CAN |
NAQ |
CAV |
H10 |
336.3 |
303.1 |
CAO |
CAN |
NAQ |
CAM |
180.0 |
180.3 |
NAQ |
CAN |
CAO |
CAP |
180.1 |
180.0 |
NAQ |
CAN |
CAO |
H11 |
0.1 |
359.9 |
NAQ |
CAN |
CAM |
CAL |
180.0 |
180.1 |
NAQ |
CAN |
CAM |
H13 |
360.0 |
0.0 |
NAQ |
CAN |
CAO |
CAM |
180.0 |
179.7 |
CAO |
CAN |
CAM |
CAL |
0.0 |
359.7 |
CAO |
CAN |
CAM |
H13 |
180.0 |
179.7 |
CAN |
CAO |
CAP |
CAJ |
359.9 |
360.0 |
CAP |
CAO |
CAN |
H11 |
180.0 |
180.0 |
CAN |
CAO |
CAP |
H12 |
180.0 |
180.0 |
NAQ |
CAN |
CAM |
CAO |
180.0 |
180.3 |
CAM |
CAN |
CAO |
CAP |
0.1 |
0.3 |
CAM |
CAN |
CAO |
H11 |
180.0 |
180.3 |
CAN |
CAM |
CAL |
CAJ |
359.9 |
360.0 |
CAL |
CAM |
CAN |
H13 |
180.0 |
180.0 |
CAN |
CAM |
CAL |
H14 |
179.9 |
180.0 |
CAP |
CAO |
CAN |
CAM |
0.1 |
0.3 |
CAN |
CAO |
CAP |
H11 |
180.0 |
180.0 |
CAO |
CAP |
CAJ |
CAL |
360.0 |
359.7 |
CAO |
CAP |
CAJ |
CAH |
180.0 |
180.0 |
CAJ |
CAP |
CAO |
H12 |
180.0 |
180.0 |
CAN |
CAM |
CAL |
H13 |
180.0 |
180.0 |
CAP |
CAJ |
CAL |
CAM |
0.1 |
0.3 |
CAM |
CAL |
CAJ |
CAH |
180.1 |
180.1 |
CAJ |
CAL |
CAM |
H14 |
180.0 |
180.0 |
CAJ |
CAP |
CAO |
H11 |
180.0 |
180.0 |
CAO |
CAP |
CAJ |
H12 |
180.0 |
180.0 |
CAM |
CAL |
CAJ |
CAP |
0.1 |
0.3 |
CAL |
CAJ |
CAP |
CAH |
179.9 |
179.8 |
CAP |
CAJ |
CAL |
H14 |
180.1 |
180.3 |
CAP |
CAJ |
CAH |
CAI |
358.5 |
180.0 |
CAP |
CAJ |
CAH |
NAG |
179.4 |
359.7 |
CAJ |
CAL |
CAM |
H13 |
179.9 |
180.0 |
CAM |
CAL |
CAJ |
H14 |
180.0 |
180.0 |
CAP |
CAJ |
CAL |
CAH |
180.1 |
180.2 |
CAL |
CAJ |
CAP |
H12 |
179.9 |
179.7 |
CAL |
CAJ |
CAH |
CAI |
178.5 |
0.2 |
CAL |
CAJ |
CAH |
NAG |
359.5 |
179.9 |
CAP |
CAJ |
CAH |
CAL |
179.9 |
179.8 |
CAH |
CAJ |
CAP |
H12 |
360.0 |
360.0 |
CAH |
CAJ |
CAL |
H14 |
0.1 |
0.1 |
CAI |
CAH |
CAJ |
NAG |
179.0 |
180.3 |
CAJ |
CAH |
CAI |
CAE |
180.5 |
180.0 |
CAJ |
CAH |
CAI |
H15 |
0.5 |
0.0 |
CAJ |
CAH |
NAG |
CAF |
179.6 |
179.8 |
CAJ |
CAH |
NAG |
H18 |
359.6 |
0.0 |
CAJ |
CAH |
CAI |
NAG |
180.8 |
179.8 |
CAI |
CAH |
NAG |
CAF |
0.4 |
359.6 |
CAI |
CAH |
NAG |
H18 |
180.4 |
179.8 |
CAH |
CAI |
CAE |
CAF |
0.2 |
360.0 |
CAH |
CAI |
CAE |
CAD |
180.2 |
180.0 |
CAE |
CAI |
CAH |
H15 |
180.0 |
180.0 |
CAJ |
CAH |
NAG |
CAI |
179.2 |
180.2 |
NAG |
CAH |
CAI |
CAE |
359.6 |
0.3 |
NAG |
CAH |
CAI |
H15 |
179.6 |
180.3 |
CAE |
CAI |
CAH |
NAG |
359.6 |
0.3 |
CAH |
CAI |
CAE |
H15 |
180.0 |
180.0 |
CAD |
CAE |
CAI |
CAF |
180.1 |
180.1 |
CAI |
CAE |
CAF |
NAC |
180.0 |
179.9 |
CAI |
CAE |
CAD |
CAA |
180.0 |
180.0 |
CAH |
NAG |
CAF |
H18 |
180.0 |
180.2 |
CAH |
NAG |
CAF |
CAE |
359.7 |
0.4 |
CAI |
CAE |
CAF |
CAD |
180.1 |
180.1 |
CAF |
CAE |
CAI |
H15 |
180.2 |
179.9 |
CAF |
CAE |
CAD |
CAA |
0.1 |
0.1 |
CAI |
CAE |
CAD |
CAF |
179.9 |
179.9 |
CAD |
CAE |
CAI |
H15 |
0.2 |
0.0 |
CAD |
CAE |
CAF |
NAC |
359.9 |
359.9 |
CAK |
CAD |
CAE |
CAA |
179.9 |
180.0 |
CAE |
CAD |
CAA |
CAB |
359.9 |
359.9 |
CAE |
CAD |
CAA |
H16 |
179.9 |
180.0 |
CAH |
NAG |
CAF |
NAC |
179.8 |
180.2 |
CAF |
NAC |
CAB |
H17 |
179.9 |
179.9 |
NAW |
CAK |
CAD |
CAA |
13.6 |
78.4 |
CAK |
CAD |
CAE |
CAF |
180.0 |
180.1 |
CAE |
CAD |
CAK |
CAA |
180.1 |
180.0 |
CAK |
CAD |
CAA |
CAB |
180.0 |
180.0 |
CAK |
CAD |
CAA |
H16 |
360.0 |
360.0 |
CAA |
CAD |
CAE |
CAF |
0.1 |
0.1 |
CAB |
CAA |
CAD |
H16 |
180.0 |
180.0 |
CAD |
CAA |
CAB |
H17 |
180.1 |
180.0 |
CAE |
CAF |
NAC |
CAB |
0.1 |
0.1 |
NAC |
CAB |
CAA |
H16 |
180.1 |
180.0 |
CAA |
CAB |
NAC |
H17 |
180.0 |
180.0 |
CAD |
CAA |
CAB |
H16 |
180.0 |
180.0 |
NAC |
CAB |
CAA |
H17 |
180.0 |
180.0 |
CAS |
CAR |
H1 |
NAQ |
239.8 |
240.1 |
CAS |
CAR |
H1 |
H2 |
119.9 |
120.1 |
H1 |
CAR |
NAQ |
CAV |
186.1 |
180.7 |
H1 |
CAR |
NAQ |
CAN |
23.7 |
56.9 |
NAQ |
CAR |
H1 |
H2 |
240.1 |
240.0 |
CAS |
CAR |
H2 |
NAQ |
120.2 |
119.9 |
CAS |
CAR |
H2 |
H1 |
240.1 |
239.9 |
H2 |
CAR |
NAQ |
CAV |
66.2 |
60.7 |
H2 |
CAR |
NAQ |
CAN |
263.8 |
296.9 |
NAQ |
CAR |
H2 |
H1 |
119.9 |
120.0 |
NAT |
CAS |
H3 |
H4 |
118.4 |
240.0 |
H3 |
CAS |
CAR |
NAQ |
298.9 |
178.4 |
H3 |
CAS |
CAR |
H1 |
58.9 |
298.3 |
H3 |
CAS |
CAR |
H2 |
178.8 |
58.4 |
NAT |
CAS |
H4 |
H3 |
241.6 |
120.0 |
H4 |
CAS |
CAR |
NAQ |
179.9 |
298.4 |
H4 |
CAS |
CAR |
H1 |
299.9 |
58.4 |
H4 |
CAS |
CAR |
H2 |
59.9 |
178.4 |
H5 |
NAT |
CAS |
H3 |
178.9 |
304.5 |
H5 |
NAT |
CAS |
H4 |
297.9 |
184.5 |
H5 |
NAT |
CAU |
CAV |
301.6 |
295.5 |
H5 |
NAT |
CAU |
H7 |
62.1 |
55.4 |
H5 |
NAT |
CAU |
H8 |
181.0 |
175.5 |
NAT |
CAU |
H7 |
CAV |
236.8 |
240.1 |
H7 |
CAU |
NAT |
H5 |
62.1 |
55.4 |
NAT |
CAU |
H7 |
H8 |
118.4 |
120.1 |
H7 |
CAU |
CAV |
NAQ |
180.1 |
181.6 |
CAV |
CAU |
H7 |
H8 |
241.6 |
240.0 |
H7 |
CAU |
CAV |
H9 |
300.1 |
301.6 |
H7 |
CAU |
CAV |
H10 |
60.1 |
61.7 |
NAT |
CAU |
H8 |
CAV |
123.3 |
119.9 |
H8 |
CAU |
NAT |
H5 |
181.0 |
175.5 |
NAT |
CAU |
H8 |
H7 |
241.6 |
239.9 |
H8 |
CAU |
CAV |
NAQ |
61.1 |
61.6 |
CAV |
CAU |
H8 |
H7 |
118.4 |
120.0 |
H8 |
CAU |
CAV |
H9 |
181.2 |
181.6 |
H8 |
CAU |
CAV |
H10 |
301.1 |
301.6 |
CAU |
CAV |
H9 |
NAQ |
239.8 |
240.1 |
H9 |
CAV |
CAU |
H7 |
300.1 |
301.6 |
H9 |
CAV |
CAU |
H8 |
181.2 |
181.6 |
CAU |
CAV |
H9 |
H10 |
119.9 |
120.0 |
H9 |
CAV |
NAQ |
CAN |
96.3 |
63.2 |
NAQ |
CAV |
H9 |
H10 |
240.1 |
239.9 |
CAU |
CAV |
H10 |
NAQ |
120.2 |
119.8 |
H10 |
CAV |
CAU |
H7 |
60.1 |
61.7 |
H10 |
CAV |
CAU |
H8 |
301.1 |
301.6 |
CAU |
CAV |
H10 |
H9 |
240.1 |
240.0 |
H10 |
CAV |
NAQ |
CAN |
336.3 |
303.1 |
NAQ |
CAV |
H10 |
H9 |
119.9 |
120.1 |
H11 |
CAO |
CAN |
CAM |
180.0 |
180.3 |
CAN |
CAO |
H11 |
CAP |
180.0 |
180.0 |
H11 |
CAO |
CAP |
CAJ |
180.0 |
180.0 |
H11 |
CAO |
CAP |
H12 |
360.0 |
360.0 |
CAO |
CAP |
H12 |
CAJ |
180.0 |
180.0 |
H12 |
CAP |
CAO |
H11 |
360.0 |
360.0 |
H12 |
CAP |
CAJ |
CAL |
179.9 |
179.7 |
H12 |
CAP |
CAJ |
CAH |
360.0 |
360.0 |
CAN |
CAM |
H13 |
CAL |
180.0 |
180.0 |
H13 |
CAM |
CAL |
CAJ |
179.9 |
180.0 |
H13 |
CAM |
CAL |
H14 |
359.9 |
360.0 |
CAM |
CAL |
H14 |
CAJ |
180.0 |
180.0 |
H14 |
CAL |
CAM |
H13 |
359.9 |
360.0 |
H14 |
CAL |
CAJ |
CAH |
0.1 |
0.1 |
H15 |
CAI |
CAH |
NAG |
179.6 |
180.3 |
CAH |
CAI |
H15 |
CAE |
180.0 |
180.0 |
H15 |
CAI |
CAE |
CAF |
180.2 |
179.9 |
H15 |
CAI |
CAE |
CAD |
0.2 |
0.0 |
CAD |
CAA |
H16 |
CAB |
180.0 |
180.0 |
H16 |
CAA |
CAB |
H17 |
0.1 |
0.0 |
H17 |
CAB |
CAA |
H16 |
0.1 |
0.0 |
CAH |
NAG |
H18 |
CAF |
180.0 |
179.8 |