PDB Chemical Component 7DG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 7DG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N9 |
C8 |
1.347 |
1.287 |
N9 |
C4 |
1.344 |
1.363 |
C8 |
C7 |
1.398 |
1.516 |
C8 |
H8 |
1.103 |
1.080 |
C7 |
C5 |
1.395 |
1.509 |
C7 |
H71 |
1.116 |
1.089 |
C7 |
H72 |
1.114 |
1.090 |
C5 |
C6 |
1.401 |
1.391 |
C5 |
C4 |
1.397 |
1.390 |
C6 |
O6 |
1.210 |
1.221 |
C6 |
N1 |
1.359 |
1.353 |
N1 |
C2 |
1.362 |
1.359 |
N1 |
HN1 |
1.019 |
0.970 |
C2 |
N2 |
1.345 |
1.369 |
C2 |
N3 |
1.352 |
1.314 |
N2 |
HN21 |
1.020 |
0.970 |
N2 |
HN22 |
1.019 |
0.970 |
N3 |
C4 |
1.354 |
1.345 |
Bond Angles for 7DG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N9 |
C4 |
108.0 |
114.1 |
N9 |
C8 |
C7 |
110.1 |
107.5 |
N9 |
C8 |
H8 |
123.5 |
126.3 |
N9 |
C4 |
C5 |
109.3 |
110.0 |
N9 |
C4 |
N3 |
128.9 |
131.5 |
C7 |
C8 |
H8 |
126.4 |
126.2 |
C8 |
C7 |
C5 |
105.5 |
103.0 |
C8 |
C7 |
H71 |
113.7 |
110.7 |
C8 |
C7 |
H72 |
113.7 |
110.7 |
C5 |
C7 |
H71 |
113.7 |
110.7 |
C5 |
C7 |
H72 |
113.7 |
110.7 |
C7 |
C5 |
C6 |
134.1 |
134.5 |
C7 |
C5 |
C4 |
107.0 |
105.4 |
H71 |
C7 |
H72 |
96.8 |
110.7 |
C6 |
C5 |
C4 |
118.9 |
120.1 |
C5 |
C6 |
O6 |
123.7 |
120.8 |
C5 |
C6 |
N1 |
117.4 |
118.4 |
C5 |
C4 |
N3 |
121.8 |
118.4 |
O6 |
C6 |
N1 |
118.9 |
120.8 |
C6 |
N1 |
C2 |
122.4 |
119.8 |
C6 |
N1 |
HN1 |
118.6 |
120.1 |
C2 |
N1 |
HN1 |
119.0 |
120.1 |
N1 |
C2 |
N2 |
122.2 |
119.0 |
N1 |
C2 |
N3 |
121.0 |
122.0 |
N2 |
C2 |
N3 |
116.8 |
119.0 |
C2 |
N2 |
HN21 |
122.2 |
120.0 |
C2 |
N2 |
HN22 |
107.6 |
120.0 |
C2 |
N3 |
C4 |
118.5 |
121.3 |
HN21 |
N2 |
HN22 |
107.8 |
119.9 |
Torsion Angles for 7DG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N9 |
C4 |
C5 |
0.3 |
-0.0 |
C8 |
N9 |
C4 |
N3 |
180.3 |
180.0 |
C7 |
C8 |
N9 |
H8 |
180.0 |
179.9 |
N9 |
C8 |
C7 |
C5 |
0.3 |
-0.0 |
N9 |
C8 |
C7 |
H71 |
125.5 |
241.6 |
N9 |
C8 |
C7 |
H72 |
235.0 |
118.4 |
C4 |
N9 |
C8 |
C7 |
359.7 |
360.0 |
C4 |
N9 |
C8 |
H8 |
179.6 |
180.1 |
C7 |
C5 |
C4 |
N9 |
359.9 |
-0.0 |
C6 |
C5 |
C4 |
N9 |
179.8 |
180.0 |
C5 |
C4 |
N9 |
N3 |
179.9 |
180.0 |
C2 |
N3 |
C4 |
N9 |
179.7 |
180.0 |
C7 |
C8 |
N9 |
C4 |
359.7 |
-0.0 |
N9 |
C8 |
C7 |
H8 |
180.0 |
180.1 |
C5 |
C7 |
C8 |
H71 |
234.8 |
118.4 |
C5 |
C7 |
C8 |
H72 |
125.3 |
241.6 |
C8 |
C7 |
C5 |
C6 |
180.0 |
179.9 |
C8 |
C7 |
C5 |
C4 |
359.9 |
360.0 |
H71 |
C7 |
C8 |
H72 |
250.5 |
123.2 |
H8 |
C8 |
N9 |
C4 |
179.6 |
180.1 |
N9 |
C8 |
H8 |
C7 |
180.0 |
179.9 |
H8 |
C8 |
C7 |
C5 |
180.3 |
179.9 |
H8 |
C8 |
C7 |
H71 |
305.5 |
61.5 |
H8 |
C8 |
C7 |
H72 |
55.0 |
298.3 |
N9 |
C4 |
C5 |
C7 |
359.9 |
-0.0 |
C5 |
C7 |
C8 |
H8 |
180.3 |
179.9 |
C8 |
C7 |
C5 |
H71 |
125.2 |
241.6 |
C8 |
C7 |
C5 |
H72 |
234.7 |
118.4 |
H71 |
C7 |
C5 |
H72 |
109.5 |
236.8 |
C6 |
C5 |
C7 |
C4 |
180.1 |
179.9 |
C7 |
C5 |
C6 |
O6 |
0.3 |
0.1 |
C7 |
C5 |
C6 |
N1 |
180.3 |
179.8 |
C7 |
C5 |
C4 |
N3 |
179.8 |
180.0 |
H71 |
C7 |
C8 |
H8 |
305.5 |
61.5 |
C8 |
C7 |
H71 |
C5 |
239.2 |
113.6 |
C8 |
C7 |
H71 |
H72 |
119.6 |
236.8 |
C5 |
C7 |
H71 |
H72 |
240.4 |
123.2 |
H71 |
C7 |
C5 |
C6 |
54.8 |
298.4 |
H71 |
C7 |
C5 |
C4 |
234.7 |
118.4 |
H72 |
C7 |
C8 |
H8 |
55.0 |
298.3 |
C8 |
C7 |
H72 |
C5 |
120.8 |
246.4 |
C8 |
C7 |
H72 |
H71 |
240.4 |
123.2 |
C5 |
C7 |
H72 |
H71 |
119.6 |
236.8 |
H72 |
C7 |
C5 |
C6 |
305.3 |
61.5 |
H72 |
C7 |
C5 |
C4 |
125.2 |
241.6 |
N9 |
C4 |
C5 |
C6 |
179.8 |
180.0 |
C6 |
C5 |
C7 |
H71 |
54.8 |
298.4 |
C6 |
C5 |
C7 |
H72 |
305.3 |
61.5 |
C7 |
C5 |
C6 |
C4 |
179.9 |
180.1 |
C6 |
C5 |
C4 |
N3 |
359.7 |
0.0 |
O6 |
C6 |
C5 |
N1 |
180.0 |
180.3 |
C5 |
C6 |
N1 |
C2 |
359.8 |
0.5 |
C5 |
C6 |
N1 |
HN1 |
179.8 |
180.0 |
N9 |
C4 |
C5 |
N3 |
180.1 |
180.0 |
C4 |
C5 |
C7 |
H71 |
234.7 |
118.4 |
C4 |
C5 |
C7 |
H72 |
125.2 |
241.6 |
C7 |
C5 |
C4 |
C6 |
180.1 |
180.0 |
C4 |
C5 |
C6 |
O6 |
180.5 |
180.0 |
C4 |
C5 |
C6 |
N1 |
0.5 |
359.7 |
C2 |
N3 |
C4 |
C5 |
359.8 |
-0.0 |
O6 |
C6 |
C5 |
C4 |
180.5 |
180.0 |
C5 |
C6 |
O6 |
N1 |
180.0 |
179.7 |
O6 |
C6 |
N1 |
C2 |
179.8 |
180.2 |
O6 |
C6 |
N1 |
HN1 |
359.8 |
359.8 |
N1 |
C6 |
C5 |
C4 |
0.5 |
359.7 |
C5 |
C6 |
N1 |
O6 |
180.0 |
180.3 |
C2 |
N1 |
C6 |
HN1 |
180.0 |
180.4 |
C6 |
N1 |
C2 |
N2 |
179.9 |
179.8 |
C6 |
N1 |
C2 |
N3 |
359.7 |
359.6 |
C6 |
N1 |
C2 |
HN1 |
180.0 |
179.6 |
N2 |
C2 |
N1 |
N3 |
180.2 |
180.2 |
N1 |
C2 |
N2 |
HN21 |
180.0 |
179.8 |
N1 |
C2 |
N2 |
HN22 |
54.7 |
359.5 |
N1 |
C2 |
N3 |
C4 |
0.4 |
0.2 |
C6 |
N1 |
HN1 |
C2 |
180.0 |
180.4 |
HN1 |
N1 |
C2 |
N2 |
359.9 |
0.2 |
HN1 |
N1 |
C2 |
N3 |
179.7 |
180.0 |
N2 |
C2 |
N1 |
HN1 |
359.9 |
0.2 |
N1 |
C2 |
N2 |
N3 |
179.8 |
179.8 |
N2 |
C2 |
N3 |
C4 |
180.3 |
180.0 |
HN21 |
N2 |
C2 |
HN22 |
125.3 |
180.3 |
N9 |
C4 |
N3 |
C2 |
179.7 |
180.0 |
C5 |
C4 |
N3 |
C2 |
359.8 |
-0.0 |
N3 |
C2 |
N1 |
HN1 |
179.7 |
180.0 |
N1 |
C2 |
N3 |
N2 |
180.2 |
180.2 |
N3 |
C2 |
N2 |
HN21 |
0.2 |
360.0 |
N3 |
C2 |
N2 |
HN22 |
234.9 |
179.7 |
HN21 |
N2 |
C2 |
N3 |
0.2 |
360.0 |
C2 |
N2 |
HN21 |
HN22 |
234.7 |
179.7 |
HN22 |
N2 |
C2 |
N3 |
234.9 |
179.7 |
C2 |
N2 |
HN22 |
HN21 |
133.5 |
180.3 |
N9 |
C4 |
N3 |
C5 |
179.9 |
180.0 |