Atom Nomenclature for 7CQ

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 7CQ

Atom Name (V3) Atom Name (V2)
N12 N1
C13 C1
C15 C2
C17 C3
C20 C4
C22 C5
C24 C6
O01 O1
S02 S1
C03 C7
C04 C8
O05 O2
C06 C9
C07 C10
C08 C11
C09 C12
BR1 BR1
C11 C13
C14 C14
N16 N2
C18 C15
C19 C16
O21 O3
C23 C17
O25 O4
H172 H2
H171 H3
H221 H4
H241 H5
H061 H7
H062 H8
H063 H9
H071 H10
H081 H11
H111 H12
H141 H13
H182 H14
H181 H15
H191 H16
H192 H17
H231 H18
H121 H20