Atom Nomenclature for 7AZ

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 7AZ

Atom Name (V3) Atom Name (V2)
C39 C1
C40 C2
C26 C3
C27 C4
C28 C5
C29 C6
C30 C7
C31 C8
C32 C9
C33 C10
C34 C11
C35 C12
O38 O1
C1 C13
C2 C14
C3 C15
C4 C16
C5 C17
C6 C18
C7 C19
C8 C20
C9 C21
C10 C22
C11 C23
C12 C24
C13 C25
C14 C26
C15 C27
C16 C28
C17 C29
C18 C30
C19 C31
C20 C32
C21 C33
C22 C34
C23 C35
C24 C36
C25 C37
O72 O2
P51 P1
O52 O3
O63 O4
C44 C38
C43 C39
P49 P2
O62 O5
O61 O6
O50 O7
C41 C40
C45 C41
C42 C42
O48 O8
O47 O9
P53 P3
O65 O10
O64 O11
O54 O12
O46 O13
P55 P4
O69 O14
O68 O15
O56 O16
P57 P5
O67 O17
O66 O18
O58 O19
P59 P6
O71 O20
O70 O21
O60 O22
O37 O23
O36 O24
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30
H31 H31
H32 H32
H33 H33
H34 H34
H35 H35
H36 H36
H37 H37
H38 H38
H39 H39
H40 H40
H41 H41
H42 H42