PDB Chemical Component 79X
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 79X
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.397 |
1.397 |
| C1 |
C6 |
1.410 |
1.382 |
| C1 |
H1 |
1.081 |
1.080 |
| C8 |
N1 |
1.371 |
1.379 |
| C3 |
N1 |
1.397 |
1.395 |
| N1 |
C10 |
1.450 |
1.351 |
| O1 |
C6 |
1.385 |
1.360 |
| O1 |
HO1 |
0.950 |
0.967 |
| C7 |
C2 |
1.448 |
1.463 |
| C2 |
C3 |
1.400 |
1.405 |
| C10 |
O2 |
1.285 |
1.216 |
| C3 |
C4 |
1.381 |
1.387 |
| C21 |
O3 |
1.424 |
1.429 |
| O3 |
C14 |
1.376 |
1.358 |
| C5 |
C4 |
1.393 |
1.380 |
| C4 |
H4 |
1.080 |
1.080 |
| C15 |
O4 |
1.375 |
1.360 |
| O4 |
C23 |
1.431 |
1.429 |
| C6 |
C5 |
1.394 |
1.391 |
| C5 |
H5 |
1.080 |
1.080 |
| C7 |
C8 |
1.389 |
1.359 |
| C7 |
H7 |
1.080 |
1.080 |
| C8 |
C12 |
1.377 |
1.477 |
| C11 |
C10 |
1.483 |
1.468 |
| C12 |
C11 |
1.397 |
1.410 |
| C11 |
C16 |
1.386 |
1.394 |
| C13 |
C12 |
1.388 |
1.388 |
| C13 |
C14 |
1.398 |
1.386 |
| C13 |
H13 |
1.080 |
1.080 |
| C14 |
C15 |
1.406 |
1.396 |
| C15 |
C16 |
1.399 |
1.383 |
| C16 |
H16 |
1.080 |
1.079 |
| C21 |
H21 |
1.100 |
1.090 |
| C21 |
H21A |
1.100 |
1.090 |
| C21 |
H21B |
1.100 |
1.090 |
| C23 |
H23 |
1.100 |
1.090 |
| C23 |
H23A |
1.100 |
1.090 |
| C23 |
H23B |
1.100 |
1.090 |
Bond Angles for 79X
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
C6 |
118.3 |
119.6 |
| C2 |
C1 |
H1 |
120.8 |
120.2 |
| C1 |
C2 |
C3 |
120.5 |
119.9 |
| C6 |
C1 |
H1 |
120.9 |
120.2 |
| C1 |
C6 |
O1 |
122.4 |
119.9 |
| C1 |
C6 |
C5 |
119.7 |
120.3 |
| C8 |
N1 |
C10 |
107.4 |
110.1 |
| C3 |
N1 |
C10 |
143.0 |
140.7 |
| N1 |
C10 |
O2 |
130.4 |
125.4 |
| C6 |
O1 |
HO1 |
109.5 |
114.0 |
| O1 |
C6 |
C5 |
117.9 |
119.8 |
| C2 |
C3 |
C4 |
121.6 |
119.7 |
| C3 |
C4 |
H4 |
121.1 |
120.0 |
| O3 |
C14 |
C13 |
120.4 |
119.9 |
| O3 |
C14 |
C15 |
118.8 |
119.8 |
| C5 |
C4 |
H4 |
121.2 |
120.0 |
| C15 |
O4 |
C23 |
119.3 |
117.0 |
| O4 |
C23 |
H23 |
109.5 |
109.5 |
| O4 |
C23 |
H23A |
109.5 |
109.5 |
| O4 |
C23 |
H23B |
109.5 |
109.5 |
| C6 |
C5 |
H5 |
118.9 |
119.7 |
| C8 |
C7 |
H7 |
127.3 |
126.4 |
| C7 |
C8 |
C12 |
139.1 |
142.2 |
| C8 |
C12 |
C11 |
111.4 |
106.2 |
| C12 |
C11 |
C16 |
122.4 |
119.8 |
| C11 |
C16 |
C15 |
117.1 |
119.7 |
| C11 |
C16 |
H16 |
121.4 |
120.2 |
| C14 |
C13 |
H13 |
121.0 |
120.1 |
| C13 |
C14 |
C15 |
120.8 |
120.3 |
| C14 |
C15 |
C16 |
121.0 |
120.4 |
| C15 |
C16 |
H16 |
121.5 |
120.1 |
| H21 |
C21 |
H21A |
109.5 |
109.5 |
| H21 |
C21 |
H21B |
109.4 |
109.5 |
| H21A |
C21 |
H21B |
109.5 |
109.5 |
| H23 |
C23 |
H23A |
109.5 |
109.5 |
| H23 |
C23 |
H23B |
109.4 |
109.5 |
| H23A |
C23 |
H23B |
109.5 |
109.5 |
Torsion Angles for 79X
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C6 |
C1 |
C2 |
H1 |
180.0 |
180.3 |
| C2 |
C1 |
C6 |
O1 |
180.3 |
180.0 |
| C2 |
C1 |
C6 |
C5 |
0.6 |
360.0 |
| C1 |
C2 |
C3 |
C4 |
3.7 |
0.0 |
| C2 |
C1 |
C6 |
H1 |
180.0 |
179.7 |
| C6 |
C1 |
C2 |
C3 |
357.5 |
0.0 |
| C1 |
C6 |
O1 |
HO1 |
180.0 |
90.0 |
| O1 |
C6 |
C1 |
C5 |
179.7 |
180.0 |
| C1 |
C6 |
C5 |
H5 |
180.2 |
180.0 |
| C2 |
C1 |
H1 |
C6 |
180.0 |
180.3 |
| H1 |
C1 |
C2 |
C3 |
177.5 |
179.7 |
| H1 |
C1 |
C6 |
O1 |
0.3 |
0.3 |
| H1 |
C1 |
C6 |
C5 |
180.6 |
180.3 |
| C3 |
N1 |
C8 |
C10 |
166.3 |
180.0 |
| C8 |
N1 |
C10 |
O2 |
180.8 |
180.0 |
| C1 |
C2 |
C3 |
N1 |
175.7 |
180.0 |
| C8 |
N1 |
C3 |
C10 |
202.1 |
180.0 |
| C3 |
N1 |
C10 |
O2 |
23.0 |
0.0 |
| O1 |
C6 |
C1 |
H1 |
0.3 |
0.3 |
| C1 |
C6 |
O1 |
C5 |
180.3 |
180.0 |
| O1 |
C6 |
C5 |
H5 |
0.5 |
360.0 |
| HO1 |
O1 |
C6 |
C5 |
359.7 |
270.0 |
| C7 |
C2 |
C1 |
H1 |
359.4 |
359.8 |
| C3 |
C2 |
C1 |
C6 |
357.5 |
0.0 |
| C3 |
C2 |
C1 |
H1 |
177.5 |
179.7 |
| C2 |
C3 |
N1 |
C10 |
167.7 |
180.0 |
| C2 |
C3 |
C4 |
H4 |
177.1 |
180.0 |
| C4 |
C3 |
N1 |
C10 |
338.8 |
0.0 |
| C5 |
C4 |
C3 |
H4 |
180.0 |
180.0 |
| O3 |
C14 |
C13 |
H13 |
358.5 |
0.0 |
| C13 |
C14 |
O3 |
C15 |
181.0 |
180.0 |
| O3 |
C14 |
C15 |
C16 |
181.0 |
180.0 |
| C1 |
C6 |
C5 |
C4 |
0.2 |
0.0 |
| O1 |
C6 |
C5 |
C4 |
180.5 |
180.0 |
| C3 |
C4 |
C5 |
H4 |
180.0 |
180.0 |
| O3 |
C14 |
C15 |
O4 |
1.1 |
359.9 |
| C15 |
O4 |
C23 |
H23 |
180.0 |
300.0 |
| C15 |
O4 |
C23 |
H23A |
300.0 |
60.0 |
| C15 |
O4 |
C23 |
H23B |
60.0 |
180.0 |
| H23 |
C23 |
O4 |
H23A |
240.0 |
240.0 |
| H23 |
C23 |
O4 |
H23B |
120.0 |
120.0 |
| H23A |
C23 |
O4 |
H23B |
240.0 |
240.0 |
| C5 |
C6 |
C1 |
H1 |
180.6 |
180.3 |
| C1 |
C6 |
C5 |
O1 |
179.7 |
180.0 |
| C5 |
C6 |
O1 |
HO1 |
359.7 |
270.0 |
| C6 |
C5 |
C4 |
H4 |
180.9 |
180.0 |
| H5 |
C5 |
C4 |
H4 |
1.0 |
360.0 |
| C7 |
C8 |
N1 |
C10 |
183.4 |
180.0 |
| C7 |
C8 |
C12 |
C11 |
183.2 |
180.0 |
| H7 |
C7 |
C8 |
C12 |
356.5 |
0.1 |
| C12 |
C8 |
N1 |
C10 |
10.4 |
360.0 |
| C12 |
C8 |
C7 |
H7 |
356.5 |
0.1 |
| C8 |
C12 |
C11 |
C16 |
180.9 |
180.0 |
| C8 |
C12 |
C11 |
C10 |
0.2 |
360.0 |
| C12 |
C11 |
C16 |
C15 |
1.8 |
0.0 |
| C12 |
C11 |
C16 |
H16 |
181.8 |
180.0 |
| C14 |
C15 |
C16 |
C11 |
359.3 |
360.0 |
| C15 |
C16 |
C11 |
H16 |
180.0 |
180.1 |
| O3 |
C14 |
C13 |
C12 |
178.5 |
180.0 |
| C13 |
C12 |
C11 |
C16 |
357.7 |
360.0 |
| O3 |
C14 |
C13 |
C15 |
179.0 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
0.0 |
360.0 |
| H13 |
C13 |
C14 |
C15 |
179.5 |
180.0 |
| O3 |
C14 |
C15 |
C13 |
181.0 |
180.0 |
| C14 |
C15 |
O4 |
C23 |
205.2 |
180.0 |
| C11 |
C16 |
C15 |
C14 |
359.3 |
360.0 |
| C15 |
C14 |
C13 |
H13 |
179.5 |
180.0 |
| C14 |
C15 |
C16 |
H16 |
179.3 |
180.0 |
| C16 |
C15 |
O4 |
C23 |
25.2 |
360.0 |
| C11 |
C16 |
C15 |
H16 |
180.0 |
179.9 |
| C11 |
C16 |
H16 |
C15 |
180.0 |
180.1 |
| H21A |
C21 |
H21 |
H21B |
120.0 |
120.0 |
| H21 |
C21 |
H21A |
H21B |
240.0 |
240.0 |
| H21 |
C21 |
H21B |
H21A |
120.0 |
120.0 |
| O4 |
C23 |
H23 |
H23A |
120.0 |
120.0 |
| O4 |
C23 |
H23 |
H23B |
240.0 |
240.0 |
| H23A |
C23 |
H23 |
H23B |
120.0 |
120.0 |
| O4 |
C23 |
H23A |
H23 |
240.0 |
240.0 |
| O4 |
C23 |
H23A |
H23B |
120.0 |
120.0 |
| H23 |
C23 |
H23A |
H23B |
240.0 |
240.0 |
| O4 |
C23 |
H23B |
H23 |
120.0 |
120.0 |
| O4 |
C23 |
H23B |
H23A |
240.0 |
240.0 |
| H23 |
C23 |
H23B |
H23A |
120.0 |
120.0 |