PDB Chemical Component 79O
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 79O
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CL1 |
C9 |
1.727 |
1.735 |
C9 |
C8 |
1.395 |
1.382 |
C9 |
C4 |
1.396 |
1.396 |
C8 |
C7 |
1.394 |
1.383 |
C7 |
C6 |
1.393 |
1.384 |
C6 |
C5 |
1.394 |
1.378 |
C5 |
C4 |
1.396 |
1.397 |
C4 |
C3 |
1.423 |
1.477 |
C3 |
N2 |
1.372 |
1.314 |
C3 |
N1 |
1.443 |
1.366 |
N2 |
C10 |
1.376 |
1.339 |
C10 |
C11 |
1.397 |
1.471 |
C10 |
C1 |
1.399 |
1.393 |
C11 |
C12 |
1.387 |
1.393 |
C11 |
C16 |
1.400 |
1.404 |
C12 |
C13 |
1.383 |
1.379 |
C13 |
BR1 |
1.929 |
1.890 |
C13 |
C14 |
1.402 |
1.388 |
C14 |
C15 |
1.378 |
1.378 |
C15 |
C16 |
1.374 |
1.390 |
C16 |
O2 |
1.340 |
1.350 |
O2 |
C1 |
1.368 |
1.349 |
C1 |
C2 |
1.379 |
1.413 |
C2 |
O1 |
1.240 |
1.220 |
C2 |
N1 |
1.467 |
1.350 |
C8 |
H8 |
1.080 |
1.080 |
C7 |
H7 |
1.080 |
1.080 |
C6 |
H6 |
1.080 |
1.080 |
C5 |
H5 |
1.080 |
1.080 |
N1 |
H1 |
1.000 |
0.969 |
C12 |
H12 |
1.080 |
1.080 |
C14 |
H14 |
1.080 |
1.080 |
C15 |
H15 |
1.080 |
1.080 |
Bond Angles for 79O
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CL1 |
C9 |
C8 |
119.3 |
120.1 |
CL1 |
C9 |
C4 |
120.7 |
120.1 |
C8 |
C9 |
C4 |
120.0 |
119.8 |
C9 |
C8 |
C7 |
120.2 |
120.1 |
C9 |
C8 |
H8 |
119.9 |
119.9 |
C9 |
C4 |
C5 |
119.6 |
119.7 |
C9 |
C4 |
C3 |
121.9 |
120.2 |
C8 |
C7 |
C6 |
119.9 |
120.3 |
C7 |
C8 |
H8 |
119.9 |
119.9 |
C8 |
C7 |
H7 |
120.0 |
119.8 |
C7 |
C6 |
C5 |
119.9 |
120.2 |
C6 |
C7 |
H7 |
120.1 |
119.9 |
C7 |
C6 |
H6 |
120.0 |
119.9 |
C6 |
C5 |
C4 |
120.4 |
119.9 |
C5 |
C6 |
H6 |
120.0 |
119.9 |
C6 |
C5 |
H5 |
119.8 |
120.1 |
C5 |
C4 |
C3 |
118.5 |
120.1 |
C4 |
C5 |
H5 |
119.8 |
120.1 |
C4 |
C3 |
N2 |
122.0 |
119.3 |
C4 |
C3 |
N1 |
121.1 |
119.2 |
N2 |
C3 |
N1 |
116.9 |
121.5 |
C3 |
N2 |
C10 |
122.4 |
121.1 |
C3 |
N1 |
C2 |
120.6 |
120.3 |
C3 |
N1 |
H1 |
119.7 |
119.8 |
N2 |
C10 |
C11 |
133.9 |
134.2 |
N2 |
C10 |
C1 |
122.4 |
120.1 |
C11 |
C10 |
C1 |
103.8 |
105.7 |
C10 |
C11 |
C12 |
131.3 |
134.1 |
C10 |
C11 |
C16 |
108.9 |
105.7 |
C10 |
C1 |
O2 |
111.2 |
108.9 |
C10 |
C1 |
C2 |
119.3 |
118.3 |
C12 |
C11 |
C16 |
119.7 |
120.2 |
C11 |
C12 |
C13 |
118.9 |
119.7 |
C11 |
C12 |
H12 |
120.5 |
120.1 |
C11 |
C16 |
C15 |
121.6 |
119.2 |
C11 |
C16 |
O2 |
108.7 |
108.3 |
C12 |
C13 |
BR1 |
119.8 |
119.9 |
C12 |
C13 |
C14 |
120.7 |
120.2 |
C13 |
C12 |
H12 |
120.6 |
120.2 |
BR1 |
C13 |
C14 |
119.5 |
119.9 |
C13 |
C14 |
C15 |
120.5 |
120.6 |
C13 |
C14 |
H14 |
119.7 |
119.6 |
C14 |
C15 |
C16 |
118.6 |
120.1 |
C15 |
C14 |
H14 |
119.7 |
119.7 |
C14 |
C15 |
H15 |
120.7 |
119.9 |
C15 |
C16 |
O2 |
129.7 |
132.5 |
C16 |
C15 |
H15 |
120.7 |
119.9 |
C16 |
O2 |
C1 |
107.5 |
111.4 |
O2 |
C1 |
C2 |
129.6 |
132.8 |
C1 |
C2 |
O1 |
114.9 |
120.7 |
C1 |
C2 |
N1 |
118.5 |
118.7 |
O1 |
C2 |
N1 |
126.6 |
120.7 |
C2 |
N1 |
H1 |
119.7 |
119.8 |
Torsion Angles for 79O
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
C9 |
CL1 |
C4 |
179.8 |
180.3 |
CL1 |
C9 |
C8 |
C7 |
180.1 |
180.0 |
CL1 |
C9 |
C8 |
H8 |
0.1 |
359.9 |
CL1 |
C9 |
C4 |
C5 |
179.8 |
179.7 |
CL1 |
C9 |
C4 |
C3 |
359.9 |
0.0 |
CL1 |
C9 |
C8 |
C4 |
180.2 |
179.7 |
C8 |
C9 |
C4 |
C5 |
0.0 |
359.4 |
C8 |
C9 |
C4 |
C3 |
180.1 |
179.7 |
C9 |
C8 |
C7 |
C6 |
0.1 |
360.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.1 |
C9 |
C8 |
C7 |
H7 |
180.1 |
180.0 |
CL1 |
C9 |
C4 |
C8 |
179.8 |
180.3 |
C4 |
C9 |
C8 |
C7 |
359.9 |
0.3 |
C4 |
C9 |
C8 |
H8 |
179.9 |
180.2 |
C6 |
C5 |
C4 |
C9 |
0.1 |
0.6 |
C5 |
C4 |
C9 |
C3 |
179.9 |
179.7 |
C9 |
C4 |
C5 |
H5 |
180.1 |
180.3 |
C9 |
C4 |
C3 |
N2 |
271.7 |
360.0 |
C9 |
C4 |
C3 |
N1 |
91.9 |
179.7 |
C7 |
C8 |
C9 |
C4 |
359.9 |
0.3 |
C9 |
C8 |
C7 |
H8 |
180.0 |
179.9 |
C8 |
C7 |
C6 |
C5 |
0.0 |
0.1 |
C6 |
C7 |
C8 |
H7 |
180.0 |
179.9 |
C8 |
C7 |
C6 |
H6 |
180.0 |
180.0 |
C6 |
C7 |
C8 |
H8 |
180.1 |
180.0 |
C8 |
C7 |
C6 |
H7 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
C4 |
359.9 |
359.6 |
C5 |
C6 |
C7 |
H6 |
180.0 |
180.1 |
C7 |
C6 |
C5 |
H5 |
179.9 |
179.9 |
C9 |
C4 |
C5 |
C6 |
0.1 |
0.6 |
C5 |
C6 |
C7 |
H7 |
180.1 |
180.0 |
C7 |
C6 |
C5 |
H6 |
180.0 |
179.9 |
C6 |
C5 |
C4 |
C3 |
180.0 |
180.3 |
C4 |
C5 |
C6 |
H5 |
180.0 |
179.7 |
C9 |
C4 |
C5 |
C3 |
180.1 |
180.3 |
C4 |
C5 |
C6 |
H6 |
179.9 |
179.7 |
C6 |
C5 |
C4 |
H5 |
180.0 |
180.3 |
C5 |
C4 |
C3 |
N2 |
91.8 |
180.3 |
C5 |
C4 |
C3 |
N1 |
271.9 |
0.0 |
C9 |
C4 |
C3 |
C5 |
179.9 |
179.7 |
C3 |
C4 |
C5 |
H5 |
360.0 |
0.0 |
N2 |
C3 |
C4 |
N1 |
179.8 |
180.3 |
C4 |
C3 |
N2 |
C10 |
180.3 |
180.0 |
C4 |
C3 |
N1 |
C2 |
180.0 |
179.8 |
C4 |
C3 |
N1 |
H1 |
360.0 |
0.0 |
C4 |
C3 |
N2 |
N1 |
180.2 |
179.7 |
N2 |
C3 |
N1 |
C2 |
0.2 |
359.5 |
N2 |
C3 |
N1 |
H1 |
180.2 |
179.7 |
C3 |
N2 |
C10 |
C11 |
179.4 |
180.0 |
C3 |
N2 |
C10 |
C1 |
359.8 |
-0.0 |
C4 |
C3 |
N1 |
N2 |
179.8 |
180.3 |
N1 |
C3 |
N2 |
C10 |
0.2 |
0.2 |
C1 |
C2 |
N1 |
C3 |
359.5 |
0.5 |
O1 |
C2 |
N1 |
C3 |
180.1 |
180.2 |
C2 |
N1 |
C3 |
H1 |
180.0 |
179.8 |
C10 |
N2 |
C3 |
N1 |
0.2 |
0.2 |
C11 |
C10 |
N2 |
C1 |
179.6 |
180.0 |
N2 |
C10 |
C11 |
C12 |
0.8 |
0.1 |
N2 |
C10 |
C11 |
C16 |
180.6 |
180.0 |
N2 |
C10 |
C1 |
O2 |
179.7 |
180.0 |
N2 |
C10 |
C1 |
C2 |
359.9 |
-0.0 |
N2 |
C10 |
C11 |
C1 |
180.3 |
180.0 |
C11 |
C10 |
C1 |
O2 |
360.0 |
360.0 |
C11 |
C10 |
C1 |
C2 |
180.1 |
180.0 |
C12 |
C11 |
C10 |
C16 |
180.2 |
180.1 |
C10 |
C11 |
C12 |
C13 |
179.9 |
180.0 |
C10 |
C11 |
C12 |
H12 |
359.9 |
359.9 |
C10 |
C11 |
C16 |
C15 |
180.4 |
180.0 |
C10 |
C11 |
C16 |
O2 |
359.5 |
0.0 |
N2 |
C10 |
C1 |
C11 |
179.7 |
180.0 |
C1 |
C10 |
C11 |
C12 |
180.5 |
180.1 |
C1 |
C10 |
C11 |
C16 |
0.3 |
-0.0 |
C16 |
O2 |
C1 |
C10 |
359.8 |
0.1 |
O2 |
C1 |
C10 |
C2 |
179.8 |
180.0 |
C10 |
C1 |
C2 |
O1 |
179.9 |
180.0 |
C10 |
C1 |
C2 |
N1 |
0.5 |
359.8 |
C12 |
C11 |
C10 |
C1 |
180.5 |
180.1 |
C10 |
C11 |
C12 |
C16 |
179.8 |
179.9 |
C12 |
C11 |
C16 |
C15 |
0.3 |
360.0 |
C12 |
C11 |
C16 |
O2 |
179.4 |
180.0 |
C11 |
C12 |
C13 |
BR1 |
179.4 |
180.0 |
C11 |
C12 |
C13 |
C14 |
359.9 |
360.0 |
C13 |
C12 |
C11 |
H12 |
180.0 |
180.1 |
C16 |
C11 |
C10 |
C1 |
0.3 |
-0.0 |
C10 |
C11 |
C16 |
C12 |
180.1 |
180.0 |
C16 |
C11 |
C12 |
C13 |
0.1 |
0.0 |
C16 |
C11 |
C12 |
H12 |
180.1 |
179.9 |
C14 |
C15 |
C16 |
C11 |
359.4 |
0.0 |
C15 |
C16 |
C11 |
O2 |
180.9 |
180.0 |
C11 |
C16 |
C15 |
H15 |
179.4 |
180.0 |
C11 |
C16 |
O2 |
C1 |
0.4 |
359.9 |
C13 |
C12 |
C11 |
C16 |
0.1 |
0.0 |
C11 |
C12 |
C13 |
H12 |
180.0 |
179.9 |
BR1 |
C13 |
C12 |
C14 |
179.6 |
180.0 |
C12 |
C13 |
C14 |
C15 |
359.8 |
0.0 |
C12 |
C13 |
C14 |
H14 |
179.8 |
180.0 |
C12 |
C13 |
BR1 |
C14 |
180.4 |
180.0 |
BR1 |
C13 |
C12 |
H12 |
359.4 |
0.1 |
BR1 |
C13 |
C14 |
C15 |
180.3 |
180.0 |
BR1 |
C13 |
C14 |
H14 |
0.3 |
360.0 |
C12 |
C13 |
C14 |
BR1 |
179.6 |
180.0 |
C14 |
C13 |
C12 |
H12 |
179.9 |
180.1 |
C13 |
C14 |
C15 |
C16 |
0.5 |
360.0 |
C15 |
C14 |
C13 |
H14 |
180.0 |
180.0 |
C13 |
C14 |
C15 |
H15 |
180.5 |
180.0 |
C11 |
C16 |
C15 |
C14 |
359.4 |
0.0 |
C13 |
C14 |
C15 |
H14 |
180.0 |
180.0 |
C14 |
C15 |
C16 |
O2 |
180.5 |
180.0 |
C16 |
C15 |
C14 |
H15 |
180.0 |
180.0 |
C11 |
C16 |
C15 |
O2 |
178.9 |
180.1 |
C16 |
C15 |
C14 |
H14 |
180.5 |
180.0 |
C14 |
C15 |
C16 |
H15 |
180.0 |
180.0 |
C15 |
C16 |
O2 |
C1 |
179.4 |
180.0 |
C10 |
C1 |
O2 |
C16 |
359.8 |
0.1 |
C11 |
C16 |
O2 |
C15 |
181.0 |
179.9 |
O2 |
C16 |
C15 |
H15 |
0.5 |
359.9 |
C16 |
O2 |
C1 |
C2 |
179.5 |
180.0 |
C10 |
C1 |
O2 |
C2 |
180.2 |
180.1 |
O2 |
C1 |
C2 |
O1 |
0.1 |
0.1 |
O2 |
C1 |
C2 |
N1 |
180.7 |
179.8 |
C3 |
N1 |
C2 |
C1 |
359.5 |
0.5 |
C10 |
C1 |
C2 |
O2 |
179.8 |
179.9 |
O1 |
C2 |
C1 |
N1 |
179.5 |
180.2 |
C1 |
C2 |
N1 |
H1 |
179.5 |
180.3 |
C3 |
N1 |
C2 |
O1 |
180.1 |
180.2 |
C1 |
C2 |
O1 |
N1 |
180.6 |
179.8 |
O1 |
C2 |
N1 |
H1 |
0.2 |
0.0 |
C3 |
N1 |
C2 |
H1 |
180.0 |
180.2 |
C1 |
C2 |
N1 |
O1 |
179.4 |
180.2 |
H8 |
C8 |
C9 |
C4 |
179.9 |
180.2 |
C9 |
C8 |
H8 |
C7 |
180.0 |
180.1 |
H8 |
C8 |
C7 |
C6 |
180.1 |
180.0 |
H8 |
C8 |
C7 |
H7 |
0.1 |
0.1 |
C8 |
C7 |
H7 |
C6 |
180.0 |
179.9 |
H7 |
C7 |
C8 |
H8 |
0.1 |
0.1 |
H7 |
C7 |
C6 |
C5 |
180.1 |
180.0 |
H7 |
C7 |
C6 |
H6 |
0.1 |
359.9 |
C7 |
C6 |
H6 |
C5 |
180.0 |
180.1 |
H6 |
C6 |
C7 |
H7 |
0.1 |
359.9 |
H6 |
C6 |
C5 |
C4 |
179.9 |
179.7 |
H6 |
C6 |
C5 |
H5 |
359.9 |
0.0 |
C6 |
C5 |
H5 |
C4 |
180.0 |
179.7 |
H5 |
C5 |
C6 |
H6 |
359.9 |
0.0 |
H5 |
C5 |
C4 |
C3 |
360.0 |
0.0 |
C3 |
N1 |
H1 |
C2 |
180.0 |
179.8 |
H12 |
C12 |
C11 |
C16 |
180.1 |
179.9 |
C11 |
C12 |
H12 |
C13 |
180.0 |
180.1 |
H12 |
C12 |
C13 |
BR1 |
359.4 |
0.1 |
H12 |
C12 |
C13 |
C14 |
179.9 |
180.1 |
C13 |
C14 |
H14 |
C15 |
180.0 |
180.0 |
H14 |
C14 |
C15 |
C16 |
180.5 |
180.0 |
H14 |
C14 |
C15 |
H15 |
0.5 |
0.0 |
C14 |
C15 |
H15 |
C16 |
180.0 |
180.0 |
H15 |
C15 |
C14 |
H14 |
0.5 |
0.0 |
H15 |
C15 |
C16 |
O2 |
0.5 |
359.9 |