PDB Chemical Component 780

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 780

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.424 1.400
C1 C6 1.424 1.391
C1 C7 1.426 1.477
C2 C3 1.402 1.365
C2 HC2 1.073 1.080
C3 C4 1.360 1.391
C3 HC3 1.076 1.080
C4 C5 1.334 1.408
C4 N3 1.292 1.379
C5 C6 1.399 1.395
C5 N4 1.325 1.357
C6 HC6 1.081 1.080
C7 N1 1.320 1.333
C7 N2 1.310 1.332
N1 HH11 1.011 0.970
N1 HH12 0.994 0.971
N2 HH21 1.010 0.970
N2 HH22 0.995 0.970
N3 C8 1.291 1.369
N3 HN3 0.990 0.970
N4 C8 1.324 1.311
C8 C1' 1.420 1.478
C1' C2' 1.396 1.397
C1' C6' 1.431 1.398
C2' C3' 1.385 1.380
C2' HC2' 1.081 1.080
C3' C4' 1.373 1.382
C3' HC3' 1.080 1.080
C4' C5' 1.391 1.393
C4' HC4' 1.081 1.080
C5' C6' 1.424 1.397
C5' C1B 1.410 1.484
C6' O6' 1.387 1.357
C1B C2B 1.407 1.394
C1B C6B 1.402 1.393
C2B C3B 1.401 1.380
C2B H2B 1.080 1.080
C3B C4B 1.388 1.383
C3B H3B 1.079 1.079
C4B C5B 1.389 1.384
C4B H4B 1.080 1.080
C5B C6B 1.391 1.381
C5B H5B 1.081 1.080
C6B H6B 1.082 1.080

Bond Angles for 780

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 116.4 120.2
C2 C1 C7 120.9 119.9
C1 C2 C3 123.4 120.5
C1 C2 HC2 119.9 119.7
C6 C1 C7 122.7 119.9
C1 C6 C5 118.0 119.6
C1 C6 HC6 121.2 120.2
C1 C7 N1 121.4 120.0
C1 C7 N2 118.2 120.0
C3 C2 HC2 116.7 119.8
C2 C3 C4 116.6 120.1
C2 C3 HC3 122.4 119.9
C4 C3 HC3 121.0 119.9
C3 C4 C5 122.9 120.1
C3 C4 N3 130.0 133.7
C5 C4 N3 107.2 106.2
C4 C5 C6 122.8 119.5
C4 C5 N4 112.2 107.2
C4 N3 C8 105.1 107.3
C4 N3 HN3 131.6 126.3
C6 C5 N4 125.0 133.3
C5 C6 HC6 120.8 120.2
C5 N4 C8 99.6 109.5
N1 C7 N2 120.4 120.0
C7 N1 HH11 117.6 120.0
C7 N1 HH12 126.5 120.0
C7 N2 HH21 119.7 120.0
C7 N2 HH22 123.2 120.0
HH11 N1 HH12 115.9 120.1
HH21 N2 HH22 117.1 120.0
C8 N3 HN3 123.2 126.4
N3 C8 N4 115.9 109.9
N3 C8 C1' 121.6 125.1
N4 C8 C1' 122.3 125.0
C8 C1' C2' 120.4 120.1
C8 C1' C6' 122.8 120.1
C2' C1' C6' 116.8 119.8
C1' C2' C3' 121.4 120.1
C1' C2' HC2' 119.9 119.9
C1' C6' C5' 122.0 119.6
C1' C6' O6' 118.9 120.2
C3' C2' HC2' 118.8 120.0
C2' C3' C4' 120.9 120.4
C2' C3' HC3' 119.7 119.8
C4' C3' HC3' 119.4 119.8
C3' C4' C5' 121.6 120.2
C3' C4' HC4' 118.6 119.9
C5' C4' HC4' 119.8 119.9
C4' C5' C6' 117.2 119.9
C4' C5' C1B 118.9 120.1
C6' C5' C1B 123.9 120.1
C5' C6' O6' 119.1 120.2
C5' C1B C2B 122.9 120.1
C5' C1B C6B 120.8 120.1
C2B C1B C6B 116.3 119.8
C1B C2B C3B 122.0 119.8
C1B C2B H2B 119.0 120.0
C1B C6B C5B 122.1 119.8
C1B C6B H6B 119.3 120.1
C3B C2B H2B 119.0 120.1
C2B C3B C4B 120.0 120.2
C2B C3B H3B 120.4 119.9
C4B C3B H3B 119.6 119.9
C3B C4B C5B 119.2 120.2
C3B C4B H4B 120.5 119.9
C5B C4B H4B 120.3 119.9
C4B C5B C6B 120.5 120.1
C4B C5B H5B 120.1 119.9
C6B C5B H5B 119.4 120.0
C5B C6B H6B 118.6 120.0

Torsion Angles for 780

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C7 180.1 180.3
C2 C1 C6 C5 359.8 359.4
C2 C1 C6 HC6 179.9 179.6
C2 C1 C7 N1 175.6 180.0
C2 C1 C7 N2 355.4 0.0
C3 C2 C1 HC2 180.5 180.1
C1 C2 C3 C4 0.1 360.0
C1 C2 C3 HC3 180.1 180.0
C2 C1 C6 C7 179.9 179.7
C6 C1 C2 C3 0.1 0.3
C6 C1 C2 HC2 179.6 180.3
C6 C1 C7 N1 355.4 359.8
C6 C1 C7 N2 175.3 179.7
C4 C5 C6 C1 0.0 0.5
C1 C6 C5 N4 179.4 180.2
C5 C6 C1 HC6 180.0 179.8
C2 C1 C7 C6 180.1 180.3
C7 C1 C2 C3 180.0 180.0
C7 C1 C2 HC2 359.5 360.0
C7 C1 C6 C5 180.0 179.7
C7 C1 C6 HC6 0.0 359.9
N1 C7 C1 N2 180.1 180.0
C1 C7 N1 HH11 357.8 359.9
C1 C7 N1 HH12 179.4 180.0
C1 C7 N2 HH21 359.1 180.0
C1 C7 N2 HH22 178.0 359.7
C3 C2 C1 C6 0.1 0.3
C3 C2 C1 C7 180.0 180.0
C1 C2 C3 HC2 179.5 179.9
C4 C3 C2 HC3 180.0 180.0
C2 C3 C4 C5 359.8 360.0
C2 C3 C4 N3 180.6 180.0
HC2 C2 C1 C6 179.6 180.3
HC2 C2 C1 C7 359.5 360.0
C1 C2 HC2 C3 180.5 180.1
HC2 C2 C3 C4 180.6 180.0
HC2 C2 C3 HC3 0.6 0.1
C4 C3 C2 HC2 180.6 180.0
C2 C3 C4 HC3 180.0 180.0
C5 C4 C3 N3 179.2 180.0
C3 C4 C5 C6 0.2 359.8
C3 C4 C5 N4 180.7 180.0
C3 C4 N3 C8 179.2 180.0
C3 C4 N3 HN3 360.0 0.1
HC3 C3 C2 HC2 0.6 0.1
C2 C3 HC3 C4 180.0 180.0
HC3 C3 C4 C5 179.8 179.9
HC3 C3 C4 N3 0.6 360.0
C1 C6 C5 C4 0.0 0.5
C5 C4 C3 HC3 179.8 179.9
C3 C4 C5 N3 180.7 180.0
C5 C4 N3 C8 360.0 0.0
C5 C4 N3 HN3 180.7 180.1
C6 C5 C4 N4 179.5 179.8
C4 C5 C6 HC6 180.0 180.3
C4 C5 N4 C8 360.0 0.0
N3 C4 C3 HC3 0.6 360.0
C3 C4 N3 C5 179.3 180.0
N3 C4 C5 C6 179.5 179.8
N3 C4 C5 N4 0.0 360.0
C8 N3 C4 HN3 179.3 179.9
C4 N3 C8 N4 0.0 360.0
C4 N3 C8 C1' 175.2 180.0
C5 C6 C1 C7 180.0 179.7
C1 C6 C5 HC6 180.0 180.2
C6 C5 C4 N3 179.5 179.8
C4 C5 C6 N4 180.6 180.3
C6 C5 N4 C8 180.5 180.3
N4 C5 C4 N3 0.0 360.0
C4 C5 N4 C6 179.5 179.7
N4 C5 C6 HC6 359.4 0.0
N3 C8 N4 C5 0.0 0.0
C5 N4 C8 C1' 184.9 180.0
HC6 C6 C1 C7 0.0 359.9
C1 C6 HC6 C5 179.9 179.8
HC6 C6 C5 N4 359.4 0.0
C1 C7 N1 N2 179.9 180.0
N1 C7 N2 HH21 179.0 0.0
N1 C7 N2 HH22 357.8 179.7
HH11 N1 C7 HH12 178.4 179.9
C1 C7 N2 N1 180.1 180.0
N2 C7 N1 HH11 177.9 180.0
N2 C7 N1 HH12 359.5 0.0
HH21 N2 C7 HH22 181.2 180.4
HH11 N1 C7 N2 177.9 180.0
C7 N1 HH11 HH12 181.4 180.1
HH12 N1 C7 N2 359.5 0.0
C7 N1 HH12 HH11 178.4 179.9
C7 N2 HH21 HH22 178.9 179.6
C7 N2 HH22 HH21 181.1 180.4
C4 N3 C8 HN3 180.7 180.1
C5 N4 C8 N3 0.0 0.0
N4 C8 N3 C1' 184.8 180.0
N3 C8 C1' C2' 190.0 40.0
N3 C8 C1' C6' 10.0 219.7
C4 N3 HN3 C8 179.1 179.9
HN3 N3 C8 N4 179.3 179.9
HN3 N3 C8 C1' 354.5 359.9
N4 C8 N3 HN3 179.3 179.9
N3 C8 N4 C1' 175.2 180.0
N4 C8 C1' C2' 4.9 220.0
N4 C8 C1' C6' 184.9 39.8
C1' C8 N3 HN3 354.5 359.9
N3 C8 C1' N4 185.1 180.0
C2' C1' C8 C6' 180.0 180.2
C8 C1' C2' C3' 179.9 180.1
C8 C1' C2' HC2' 0.0 0.0
C8 C1' C6' C5' 180.1 179.7
C8 C1' C6' O6' 0.3 0.2
C8 C1' C2' C6' 180.0 179.8
C2' C1' C6' C5' 0.1 359.5
C2' C1' C6' O6' 180.4 180.0
C3' C2' C1' HC2' 179.9 180.1
C1' C2' C3' C4' 0.1 360.0
C1' C2' C3' HC3' 180.0 180.0
C8 C1' C6' C2' 180.0 180.2
C6' C1' C2' C3' 359.9 0.3
C6' C1' C2' HC2' 180.0 180.2
C4' C5' C6' C1' 359.8 0.4
C1' C6' C5' C1B 179.6 180.3
C5' C6' C1' O6' 179.8 179.6
C3' C2' C1' C6' 359.9 0.3
C1' C2' C3' HC2' 180.1 179.9
C4' C3' C2' HC3' 180.1 179.9
C2' C3' C4' C5' 359.9 360.0
C2' C3' C4' HC4' 179.9 180.1
HC2' C2' C1' C6' 180.0 180.2
C1' C2' HC2' C3' 179.9 180.1
HC2' C2' C3' C4' 180.0 180.0
HC2' C2' C3' HC3' 359.9 0.1
C4' C3' C2' HC2' 180.0 180.0
C2' C3' C4' HC3' 179.9 180.1
C5' C4' C3' HC4' 180.0 179.9
C3' C4' C5' C6' 0.2 359.8
C3' C4' C5' C1B 180.3 180.0
HC3' C3' C2' HC2' 359.9 0.1
C2' C3' HC3' C4' 180.1 179.9
HC3' C3' C4' C5' 179.9 179.9
HC3' C3' C4' HC4' 360.0 360.0
C1' C6' C5' C4' 359.8 0.4
C5' C4' C3' HC3' 179.9 179.9
C3' C4' C5' HC4' 180.0 180.1
C6' C5' C4' C1B 179.9 179.9
C4' C5' C6' O6' 179.6 180.0
C4' C5' C1B C2B 121.9 310.1
C4' C5' C1B C6B 302.0 129.8
HC4' C4' C3' HC3' 360.0 360.0
C3' C4' HC4' C5' 180.0 179.9
HC4' C4' C5' C6' 180.2 179.8
HC4' C4' C5' C1B 0.3 359.9
C1' C6' C5' O6' 180.2 180.4
C6' C5' C4' HC4' 180.2 179.8
C4' C5' C6' C1B 180.1 180.1
C6' C5' C1B C2B 302.0 130.2
C6' C5' C1B C6B 122.2 309.9
C1B C5' C4' HC4' 0.3 359.9
C4' C5' C1B C6' 179.9 179.9
C1B C5' C6' O6' 359.4 359.8
C2B C1B C5' C6B 179.9 180.3
C5' C1B C2B C3B 180.0 180.0
C5' C1B C2B H2B 0.0 360.0
C5' C1B C6B C5B 179.9 179.7
C5' C1B C6B H6B 0.1 0.3
C1' C6' O6' C5' 179.8 179.6
O6' C6' C5' C1B 359.4 359.8
C5' C1B C2B C6B 180.1 179.7
C2B C1B C6B C5B 0.1 359.4
C2B C1B C6B H6B 180.2 180.0
C3B C2B C1B H2B 180.0 180.0
C1B C2B C3B C4B 0.1 0.0
C1B C2B C3B H3B 179.9 180.0
C5' C1B C6B C2B 179.9 180.3
C6B C1B C2B C3B 359.9 0.3
C6B C1B C2B H2B 179.9 180.2
C4B C5B C6B C1B 360.0 0.7
C1B C6B C5B H5B 179.9 180.3
C5B C6B C1B H6B 179.8 179.4
C3B C2B C1B C6B 359.9 0.3
C1B C2B C3B H2B 180.0 180.0
C4B C3B C2B H3B 180.2 180.0
C2B C3B C4B C5B 360.0 0.0
C2B C3B C4B H4B 180.0 180.0
H2B C2B C1B C6B 179.9 180.2
C1B C2B H2B C3B 180.0 180.0
H2B C2B C3B C4B 180.1 180.0
H2B C2B C3B H3B 359.9 0.1
C4B C3B C2B H2B 180.1 180.0
C2B C3B C4B H3B 179.8 180.0
C5B C4B C3B H4B 180.0 180.1
C3B C4B C5B C6B 360.0 359.6
C3B C4B C5B H5B 180.0 179.9
H3B C3B C2B H2B 359.9 0.1
C2B C3B H3B C4B 180.2 180.0
H3B C3B C4B C5B 180.2 180.0
H3B C3B C4B H4B 0.2 360.0
C1B C6B C5B C4B 360.0 0.7
C5B C4B C3B H3B 180.2 180.0
C3B C4B C5B H4B 180.0 179.9
C6B C5B C4B H5B 180.0 179.7
C4B C5B C6B H6B 179.8 180.0
H4B C4B C3B H3B 0.2 360.0
C3B C4B H4B C5B 180.0 180.1
H4B C4B C5B C6B 180.0 179.7
H4B C4B C5B H5B 0.0 0.0
C1B C6B C5B H6B 180.2 180.6
C6B C5B C4B H4B 180.0 179.7
C4B C5B C6B H5B 180.0 180.3
H5B C5B C4B H4B 0.0 0.0
C4B C5B H5B C6B 180.0 179.7
H5B C5B C6B H6B 359.8 359.7
C1B C6B H6B C5B 179.8 179.4
H6B C6B C5B H5B 359.8 359.7