PDB Chemical Component 762
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 762
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.417 |
1.401 |
C1 |
C6 |
1.388 |
1.391 |
C1 |
C7 |
1.406 |
1.478 |
C2 |
CL2 |
1.793 |
1.736 |
C2 |
C3 |
1.414 |
1.377 |
C3 |
C4 |
1.382 |
1.389 |
C3 |
HC3 |
1.082 |
1.080 |
C4 |
C5 |
1.347 |
1.408 |
C4 |
N3 |
1.298 |
1.380 |
C5 |
C6 |
1.395 |
1.395 |
C5 |
N4 |
1.328 |
1.357 |
C6 |
HC6 |
1.079 |
1.080 |
C7 |
N1 |
1.319 |
1.332 |
C7 |
N2 |
1.309 |
1.332 |
N1 |
HH11 |
1.010 |
0.970 |
N1 |
HH12 |
0.995 |
0.970 |
N2 |
HH21 |
1.005 |
0.970 |
N2 |
HH22 |
0.993 |
0.970 |
N3 |
C8 |
1.308 |
1.370 |
N3 |
HN3 |
0.994 |
0.970 |
N4 |
C8 |
1.328 |
1.310 |
C8 |
C1' |
1.394 |
1.477 |
C1' |
C2' |
1.395 |
1.396 |
C1' |
C6' |
1.414 |
1.398 |
C2' |
C3' |
1.398 |
1.380 |
C2' |
HC2' |
1.079 |
1.080 |
C3' |
C4' |
1.385 |
1.382 |
C3' |
HC3' |
1.082 |
1.081 |
C4' |
C5' |
1.399 |
1.393 |
C4' |
HC4' |
1.081 |
1.079 |
C5' |
C6' |
1.406 |
1.397 |
C5' |
C1B |
1.398 |
1.484 |
C6' |
O6' |
1.388 |
1.357 |
C1B |
C2B |
1.401 |
1.393 |
C1B |
C6B |
1.392 |
1.394 |
C2B |
C3B |
1.402 |
1.381 |
C2B |
H2B |
1.082 |
1.080 |
C3B |
C4B |
1.382 |
1.383 |
C3B |
H3B |
1.081 |
1.080 |
C4B |
C5B |
1.383 |
1.382 |
C4B |
H4B |
1.081 |
1.081 |
C5B |
C6B |
1.395 |
1.380 |
C5B |
H5B |
1.081 |
1.080 |
C6B |
H6B |
1.081 |
1.080 |
Bond Angles for 762
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
119.5 |
120.2 |
C2 |
C1 |
C7 |
121.3 |
119.9 |
C1 |
C2 |
CL2 |
122.6 |
119.9 |
C1 |
C2 |
C3 |
119.6 |
120.3 |
C6 |
C1 |
C7 |
119.1 |
119.9 |
C1 |
C6 |
C5 |
119.5 |
119.7 |
C1 |
C6 |
HC6 |
120.3 |
120.2 |
C1 |
C7 |
N1 |
122.5 |
120.0 |
C1 |
C7 |
N2 |
116.1 |
120.0 |
CL2 |
C2 |
C3 |
117.7 |
119.8 |
C2 |
C3 |
C4 |
118.3 |
120.0 |
C2 |
C3 |
HC3 |
121.5 |
120.0 |
C4 |
C3 |
HC3 |
120.3 |
120.0 |
C3 |
C4 |
C5 |
122.2 |
120.2 |
C3 |
C4 |
N3 |
133.1 |
133.7 |
C5 |
C4 |
N3 |
104.7 |
106.2 |
C4 |
C5 |
C6 |
120.8 |
119.6 |
C4 |
C5 |
N4 |
113.1 |
107.2 |
C4 |
N3 |
C8 |
108.3 |
107.3 |
C4 |
N3 |
HN3 |
130.1 |
126.3 |
C6 |
C5 |
N4 |
126.1 |
133.2 |
C5 |
C6 |
HC6 |
120.2 |
120.2 |
C5 |
N4 |
C8 |
101.1 |
109.6 |
N1 |
C7 |
N2 |
121.4 |
120.0 |
C7 |
N1 |
HH11 |
119.6 |
120.0 |
C7 |
N1 |
HH12 |
123.9 |
120.0 |
C7 |
N2 |
HH21 |
118.3 |
120.0 |
C7 |
N2 |
HH22 |
125.8 |
120.0 |
HH11 |
N1 |
HH12 |
116.5 |
119.9 |
HH21 |
N2 |
HH22 |
115.9 |
120.0 |
C8 |
N3 |
HN3 |
121.7 |
126.4 |
N3 |
C8 |
N4 |
112.9 |
109.8 |
N3 |
C8 |
C1' |
122.7 |
125.1 |
N4 |
C8 |
C1' |
124.2 |
125.1 |
C8 |
C1' |
C2' |
120.2 |
120.1 |
C8 |
C1' |
C6' |
120.4 |
120.1 |
C2' |
C1' |
C6' |
119.4 |
119.8 |
C1' |
C2' |
C3' |
120.2 |
120.1 |
C1' |
C2' |
HC2' |
120.5 |
119.9 |
C1' |
C6' |
C5' |
120.0 |
119.6 |
C1' |
C6' |
O6' |
119.8 |
120.2 |
C3' |
C2' |
HC2' |
119.3 |
119.9 |
C2' |
C3' |
C4' |
120.4 |
120.4 |
C2' |
C3' |
HC3' |
120.3 |
119.7 |
C4' |
C3' |
HC3' |
119.3 |
119.8 |
C3' |
C4' |
C5' |
120.5 |
120.2 |
C3' |
C4' |
HC4' |
119.1 |
119.9 |
C5' |
C4' |
HC4' |
120.4 |
119.9 |
C4' |
C5' |
C6' |
119.4 |
119.9 |
C4' |
C5' |
C1B |
119.2 |
120.0 |
C6' |
C5' |
C1B |
121.4 |
120.1 |
C5' |
C6' |
O6' |
120.2 |
120.2 |
C5' |
C1B |
C2B |
120.1 |
120.1 |
C5' |
C1B |
C6B |
121.1 |
120.1 |
C2B |
C1B |
C6B |
118.7 |
119.8 |
C1B |
C2B |
C3B |
120.4 |
119.9 |
C1B |
C2B |
H2B |
120.1 |
120.1 |
C1B |
C6B |
C5B |
120.4 |
119.9 |
C1B |
C6B |
H6B |
120.1 |
120.1 |
C3B |
C2B |
H2B |
119.4 |
120.0 |
C2B |
C3B |
C4B |
120.1 |
120.1 |
C2B |
C3B |
H3B |
120.2 |
119.9 |
C4B |
C3B |
H3B |
119.7 |
120.0 |
C3B |
C4B |
C5B |
119.7 |
120.3 |
C3B |
C4B |
H4B |
120.1 |
119.8 |
C5B |
C4B |
H4B |
120.2 |
119.9 |
C4B |
C5B |
C6B |
120.7 |
120.1 |
C4B |
C5B |
H5B |
119.5 |
120.0 |
C6B |
C5B |
H5B |
119.8 |
119.9 |
C5B |
C6B |
H6B |
119.5 |
120.0 |
Torsion Angles for 762
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C7 |
178.8 |
179.7 |
C2 |
C1 |
C6 |
C5 |
359.9 |
0.3 |
C2 |
C1 |
C6 |
HC6 |
179.5 |
180.2 |
C2 |
C1 |
C7 |
N1 |
202.3 |
56.1 |
C2 |
C1 |
C7 |
N2 |
23.7 |
236.1 |
CL2 |
C2 |
C1 |
C3 |
181.9 |
180.5 |
C1 |
C2 |
C3 |
C4 |
359.8 |
0.6 |
C1 |
C2 |
C3 |
HC3 |
179.8 |
180.3 |
C2 |
C1 |
C6 |
C7 |
181.2 |
180.3 |
C6 |
C1 |
C2 |
CL2 |
182.1 |
180.0 |
C6 |
C1 |
C2 |
C3 |
0.3 |
359.4 |
C6 |
C1 |
C7 |
N1 |
23.5 |
236.4 |
C6 |
C1 |
C7 |
N2 |
205.0 |
56.4 |
C4 |
C5 |
C6 |
C1 |
359.8 |
359.9 |
C1 |
C6 |
C5 |
N4 |
180.7 |
180.0 |
C5 |
C6 |
C1 |
HC6 |
180.4 |
180.1 |
C2 |
C1 |
C7 |
C6 |
178.8 |
179.7 |
C7 |
C1 |
C2 |
CL2 |
3.4 |
0.2 |
C7 |
C1 |
C2 |
C3 |
181.5 |
179.7 |
C7 |
C1 |
C6 |
C5 |
178.7 |
180.0 |
C7 |
C1 |
C6 |
HC6 |
358.3 |
359.9 |
N1 |
C7 |
C1 |
N2 |
178.6 |
180.0 |
C1 |
C7 |
N1 |
HH11 |
357.6 |
185.3 |
C1 |
C7 |
N1 |
HH12 |
178.7 |
5.2 |
C1 |
C7 |
N2 |
HH21 |
0.8 |
360.0 |
C1 |
C7 |
N2 |
HH22 |
179.0 |
179.7 |
CL2 |
C2 |
C1 |
C6 |
182.1 |
180.0 |
CL2 |
C2 |
C1 |
C7 |
3.4 |
0.2 |
C1 |
C2 |
CL2 |
C3 |
178.2 |
179.5 |
CL2 |
C2 |
C3 |
C4 |
178.0 |
180.1 |
CL2 |
C2 |
C3 |
HC3 |
358.0 |
359.7 |
C3 |
C2 |
C1 |
C6 |
0.3 |
359.4 |
C3 |
C2 |
C1 |
C7 |
181.5 |
179.7 |
C1 |
C2 |
C3 |
CL2 |
181.8 |
180.5 |
C4 |
C3 |
C2 |
HC3 |
180.0 |
180.4 |
C2 |
C3 |
C4 |
C5 |
360.0 |
359.6 |
C2 |
C3 |
C4 |
N3 |
179.2 |
179.8 |
C2 |
C3 |
C4 |
HC3 |
180.0 |
179.6 |
C5 |
C4 |
C3 |
N3 |
180.8 |
179.8 |
C3 |
C4 |
C5 |
C6 |
0.2 |
0.1 |
C3 |
C4 |
C5 |
N4 |
179.5 |
180.1 |
C3 |
C4 |
N3 |
C8 |
180.6 |
179.9 |
C3 |
C4 |
N3 |
HN3 |
359.8 |
359.9 |
C2 |
C3 |
HC3 |
C4 |
180.0 |
180.4 |
HC3 |
C3 |
C4 |
C5 |
179.9 |
180.0 |
HC3 |
C3 |
C4 |
N3 |
359.1 |
0.1 |
C1 |
C6 |
C5 |
C4 |
359.8 |
359.9 |
C5 |
C4 |
C3 |
HC3 |
179.9 |
180.0 |
C3 |
C4 |
C5 |
N3 |
179.4 |
180.1 |
C5 |
C4 |
N3 |
C8 |
359.9 |
0.1 |
C5 |
C4 |
N3 |
HN3 |
179.1 |
180.0 |
C6 |
C5 |
C4 |
N4 |
180.8 |
180.1 |
C4 |
C5 |
C6 |
HC6 |
180.2 |
180.0 |
C4 |
C5 |
N4 |
C8 |
0.0 |
0.0 |
N3 |
C4 |
C3 |
HC3 |
359.1 |
0.1 |
C3 |
C4 |
N3 |
C5 |
180.7 |
179.9 |
N3 |
C4 |
C5 |
C6 |
180.8 |
180.0 |
N3 |
C4 |
C5 |
N4 |
0.0 |
360.0 |
C8 |
N3 |
C4 |
HN3 |
180.8 |
180.0 |
C4 |
N3 |
C8 |
N4 |
0.1 |
360.0 |
C4 |
N3 |
C8 |
C1' |
185.1 |
180.0 |
C5 |
C6 |
C1 |
C7 |
178.7 |
180.0 |
C1 |
C6 |
C5 |
HC6 |
179.6 |
179.9 |
C6 |
C5 |
C4 |
N3 |
180.8 |
180.0 |
C4 |
C5 |
C6 |
N4 |
179.1 |
179.9 |
C6 |
C5 |
N4 |
C8 |
179.2 |
179.9 |
N4 |
C5 |
C4 |
N3 |
0.0 |
360.0 |
C4 |
C5 |
N4 |
C6 |
180.8 |
180.1 |
N4 |
C5 |
C6 |
HC6 |
1.1 |
0.1 |
N3 |
C8 |
N4 |
C5 |
359.9 |
0.0 |
C5 |
N4 |
C8 |
C1' |
174.9 |
179.9 |
HC6 |
C6 |
C1 |
C7 |
358.3 |
359.9 |
C1 |
C6 |
HC6 |
C5 |
180.4 |
180.1 |
HC6 |
C6 |
C5 |
N4 |
1.1 |
0.1 |
C1 |
C7 |
N1 |
N2 |
181.5 |
180.0 |
N1 |
C7 |
N2 |
HH21 |
182.2 |
179.9 |
N1 |
C7 |
N2 |
HH22 |
0.4 |
359.7 |
HH11 |
N1 |
C7 |
HH12 |
178.9 |
180.1 |
C1 |
C7 |
N2 |
N1 |
178.6 |
180.0 |
N2 |
C7 |
N1 |
HH11 |
176.1 |
5.3 |
N2 |
C7 |
N1 |
HH12 |
357.2 |
185.3 |
HH21 |
N2 |
C7 |
HH22 |
181.8 |
180.3 |
HH11 |
N1 |
C7 |
N2 |
176.1 |
5.3 |
C7 |
N1 |
HH11 |
HH12 |
181.0 |
179.9 |
HH12 |
N1 |
C7 |
N2 |
357.2 |
185.3 |
C7 |
N1 |
HH12 |
HH11 |
179.0 |
180.1 |
C7 |
N2 |
HH21 |
HH22 |
178.3 |
179.7 |
C7 |
N2 |
HH22 |
HH21 |
181.8 |
180.3 |
C4 |
N3 |
C8 |
HN3 |
179.3 |
180.0 |
C5 |
N4 |
C8 |
N3 |
359.9 |
0.0 |
N4 |
C8 |
N3 |
C1' |
175.0 |
179.9 |
N3 |
C8 |
C1' |
C2' |
162.2 |
320.2 |
N3 |
C8 |
C1' |
C6' |
342.3 |
140.0 |
C4 |
N3 |
HN3 |
C8 |
180.9 |
180.0 |
HN3 |
N3 |
C8 |
N4 |
180.8 |
180.0 |
HN3 |
N3 |
C8 |
C1' |
5.8 |
0.1 |
N4 |
C8 |
N3 |
HN3 |
180.8 |
180.0 |
N3 |
C8 |
N4 |
C1' |
185.1 |
180.1 |
N4 |
C8 |
C1' |
C2' |
347.7 |
140.3 |
N4 |
C8 |
C1' |
C6' |
167.8 |
320.1 |
C1' |
C8 |
N3 |
HN3 |
5.8 |
0.1 |
N3 |
C8 |
C1' |
N4 |
174.4 |
179.9 |
C2' |
C1' |
C8 |
C6' |
179.9 |
180.2 |
C8 |
C1' |
C2' |
C3' |
180.2 |
180.0 |
C8 |
C1' |
C2' |
HC2' |
0.2 |
0.0 |
C8 |
C1' |
C6' |
C5' |
179.8 |
179.7 |
C8 |
C1' |
C6' |
O6' |
360.0 |
0.3 |
C8 |
C1' |
C2' |
C6' |
180.1 |
179.8 |
C2' |
C1' |
C6' |
C5' |
359.9 |
359.5 |
C2' |
C1' |
C6' |
O6' |
180.1 |
180.1 |
C3' |
C2' |
C1' |
HC2' |
180.0 |
180.0 |
C1' |
C2' |
C3' |
C4' |
359.9 |
360.0 |
C1' |
C2' |
C3' |
HC3' |
179.7 |
180.0 |
C8 |
C1' |
C6' |
C2' |
179.9 |
180.2 |
C6' |
C1' |
C2' |
C3' |
0.1 |
0.2 |
C6' |
C1' |
C2' |
HC2' |
180.1 |
180.2 |
C4' |
C5' |
C6' |
C1' |
0.0 |
0.6 |
C1' |
C6' |
C5' |
C1B |
179.4 |
180.3 |
C5' |
C6' |
C1' |
O6' |
179.8 |
179.4 |
C3' |
C2' |
C1' |
C6' |
0.1 |
0.2 |
C1' |
C2' |
C3' |
HC2' |
180.0 |
180.0 |
C4' |
C3' |
C2' |
HC3' |
180.2 |
180.0 |
C2' |
C3' |
C4' |
C5' |
0.0 |
0.1 |
C2' |
C3' |
C4' |
HC4' |
179.7 |
180.0 |
HC2' |
C2' |
C1' |
C6' |
180.1 |
180.2 |
C1' |
C2' |
HC2' |
C3' |
180.0 |
180.0 |
HC2' |
C2' |
C3' |
C4' |
179.9 |
180.0 |
HC2' |
C2' |
C3' |
HC3' |
359.7 |
360.0 |
C4' |
C3' |
C2' |
HC2' |
179.9 |
180.0 |
C2' |
C3' |
C4' |
HC3' |
179.8 |
180.0 |
C5' |
C4' |
C3' |
HC4' |
180.4 |
180.1 |
C3' |
C4' |
C5' |
C6' |
0.0 |
359.7 |
C3' |
C4' |
C5' |
C1B |
180.6 |
180.0 |
HC3' |
C3' |
C2' |
HC2' |
359.7 |
360.0 |
C2' |
C3' |
HC3' |
C4' |
180.2 |
180.0 |
HC3' |
C3' |
C4' |
C5' |
180.2 |
180.1 |
HC3' |
C3' |
C4' |
HC4' |
359.9 |
360.0 |
C1' |
C6' |
C5' |
C4' |
0.0 |
0.6 |
C5' |
C4' |
C3' |
HC3' |
180.2 |
180.1 |
C3' |
C4' |
C5' |
HC4' |
179.6 |
179.9 |
C6' |
C5' |
C4' |
C1B |
179.4 |
179.7 |
C4' |
C5' |
C6' |
O6' |
179.9 |
180.0 |
C4' |
C5' |
C1B |
C2B |
47.6 |
310.0 |
C4' |
C5' |
C1B |
C6B |
227.6 |
129.7 |
HC4' |
C4' |
C3' |
HC3' |
359.9 |
360.0 |
C3' |
C4' |
HC4' |
C5' |
180.4 |
180.1 |
HC4' |
C4' |
C5' |
C6' |
180.4 |
179.7 |
HC4' |
C4' |
C5' |
C1B |
1.0 |
0.0 |
C1' |
C6' |
C5' |
O6' |
180.2 |
180.6 |
C6' |
C5' |
C4' |
HC4' |
180.4 |
179.7 |
C4' |
C5' |
C6' |
C1B |
180.6 |
180.3 |
C6' |
C5' |
C1B |
C2B |
228.1 |
130.3 |
C6' |
C5' |
C1B |
C6B |
48.2 |
310.0 |
C1B |
C5' |
C4' |
HC4' |
1.0 |
0.0 |
C4' |
C5' |
C1B |
C6' |
179.4 |
179.7 |
C1B |
C5' |
C6' |
O6' |
359.3 |
359.7 |
C2B |
C1B |
C5' |
C6B |
180.0 |
180.2 |
C5' |
C1B |
C2B |
C3B |
180.0 |
180.0 |
C5' |
C1B |
C2B |
H2B |
359.9 |
0.0 |
C5' |
C1B |
C6B |
C5B |
180.0 |
179.7 |
C5' |
C1B |
C6B |
H6B |
359.9 |
0.2 |
C1' |
C6' |
O6' |
C5' |
179.8 |
179.4 |
O6' |
C6' |
C5' |
C1B |
359.3 |
359.7 |
C5' |
C1B |
C2B |
C6B |
180.0 |
179.8 |
C2B |
C1B |
C6B |
C5B |
0.0 |
359.4 |
C2B |
C1B |
C6B |
H6B |
180.0 |
180.0 |
C3B |
C2B |
C1B |
H2B |
180.1 |
180.0 |
C1B |
C2B |
C3B |
C4B |
360.0 |
360.0 |
C1B |
C2B |
C3B |
H3B |
179.8 |
180.0 |
C5' |
C1B |
C6B |
C2B |
180.0 |
180.2 |
C6B |
C1B |
C2B |
C3B |
360.0 |
0.3 |
C6B |
C1B |
C2B |
H2B |
179.9 |
180.2 |
C4B |
C5B |
C6B |
C1B |
360.0 |
0.6 |
C1B |
C6B |
C5B |
H5B |
179.6 |
180.3 |
C5B |
C6B |
C1B |
H6B |
180.1 |
179.4 |
C3B |
C2B |
C1B |
C6B |
360.0 |
0.3 |
C1B |
C2B |
C3B |
H2B |
179.9 |
180.0 |
C4B |
C3B |
C2B |
H3B |
180.2 |
180.0 |
C2B |
C3B |
C4B |
C5B |
0.0 |
0.0 |
C2B |
C3B |
C4B |
H4B |
180.0 |
180.0 |
H2B |
C2B |
C1B |
C6B |
179.9 |
180.2 |
C1B |
C2B |
H2B |
C3B |
180.1 |
180.0 |
H2B |
C2B |
C3B |
C4B |
180.1 |
180.0 |
H2B |
C2B |
C3B |
H3B |
360.0 |
0.0 |
C4B |
C3B |
C2B |
H2B |
180.1 |
180.0 |
C2B |
C3B |
C4B |
H3B |
179.8 |
180.0 |
C5B |
C4B |
C3B |
H4B |
180.0 |
180.0 |
C3B |
C4B |
C5B |
C6B |
0.0 |
359.7 |
C3B |
C4B |
C5B |
H5B |
180.3 |
179.9 |
H3B |
C3B |
C2B |
H2B |
360.0 |
0.0 |
C2B |
C3B |
H3B |
C4B |
180.2 |
180.0 |
H3B |
C3B |
C4B |
C5B |
180.2 |
180.1 |
H3B |
C3B |
C4B |
H4B |
0.2 |
0.0 |
C1B |
C6B |
C5B |
C4B |
360.0 |
0.6 |
C5B |
C4B |
C3B |
H3B |
180.2 |
180.1 |
C3B |
C4B |
C5B |
H4B |
180.0 |
180.0 |
C6B |
C5B |
C4B |
H5B |
179.7 |
179.7 |
C4B |
C5B |
C6B |
H6B |
180.0 |
180.0 |
H4B |
C4B |
C3B |
H3B |
0.2 |
0.0 |
C3B |
C4B |
H4B |
C5B |
180.0 |
180.0 |
H4B |
C4B |
C5B |
C6B |
180.0 |
179.7 |
H4B |
C4B |
C5B |
H5B |
0.3 |
360.0 |
C1B |
C6B |
C5B |
H6B |
179.9 |
180.6 |
C6B |
C5B |
C4B |
H4B |
180.0 |
179.7 |
C4B |
C5B |
C6B |
H5B |
180.3 |
180.3 |
H5B |
C5B |
C4B |
H4B |
0.3 |
360.0 |
C4B |
C5B |
H5B |
C6B |
179.7 |
179.7 |
H5B |
C5B |
C6B |
H6B |
359.7 |
359.8 |
C1B |
C6B |
H6B |
C5B |
180.1 |
179.4 |
H6B |
C6B |
C5B |
H5B |
359.7 |
359.8 |