Atom Nomenclature for 73R

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 73R

Atom Name (V3) Atom Name (V2)
C1 C1
C2 C2
C3 C3
C5 C4
C8 C5
C9 C6
C12 C7
C13 C8
C14 C9
C15 C10
C17 C11
C18 C12
CAP C13
N4 N1
N6 N2
N7 N3
N16 N4
O24 O1
C26 C14
C27 C15
C28 C16
C29 C17
C30 C18
C31 C19
C35 C20
C36 C21
C37 C22
N38 N5
C39 C23
C40 C24
C41 C25
C42 C26
F32 F1
F33 F2
F34 F3
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H28 H28
H29 H29
H30 H30
H31 H31
H32 H32
H33 H33
H34 H34
H35 H35
H36 H36
H37 H37