PDB Chemical Component 6VW
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6VW
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O27 |
C26 |
1.403 |
1.429 |
| C18 |
C19 |
1.540 |
1.551 |
| C18 |
C17 |
1.529 |
1.517 |
| C19 |
C13 |
1.546 |
1.526 |
| C27 |
C17 |
1.540 |
1.530 |
| C17 |
C26 |
1.538 |
1.526 |
| C17 |
C16 |
1.545 |
1.552 |
| C26 |
C25 |
1.546 |
1.550 |
| C5 |
C6 |
1.525 |
1.528 |
| C5 |
C4 |
1.531 |
1.518 |
| C6 |
C1 |
1.514 |
1.516 |
| C13 |
C4 |
1.554 |
1.534 |
| C13 |
C12 |
1.551 |
1.536 |
| C4 |
C3 |
1.523 |
1.498 |
| C25 |
C24 |
1.550 |
1.553 |
| C16 |
C12 |
1.529 |
1.518 |
| C16 |
C24 |
1.539 |
1.534 |
| C12 |
C11 |
1.528 |
1.532 |
| C1 |
O1 |
1.194 |
1.213 |
| C1 |
C2 |
1.479 |
1.467 |
| C3 |
C2 |
1.330 |
1.332 |
| C3 |
C10 |
1.509 |
1.518 |
| C11 |
C10 |
1.529 |
1.531 |
| C6 |
H1 |
1.100 |
1.090 |
| C6 |
H2 |
1.100 |
1.091 |
| C2 |
H3 |
1.080 |
1.080 |
| C4 |
H5 |
1.100 |
1.089 |
| C5 |
H6 |
1.100 |
1.090 |
| C5 |
H7 |
1.100 |
1.090 |
| C10 |
H9 |
1.100 |
1.090 |
| C10 |
H10 |
1.100 |
1.090 |
| C11 |
H11 |
1.100 |
1.090 |
| C11 |
H12 |
1.100 |
1.090 |
| C12 |
H13 |
1.100 |
1.089 |
| C13 |
H14 |
1.100 |
1.089 |
| C16 |
H15 |
1.100 |
1.090 |
| C18 |
H16 |
1.100 |
1.091 |
| C18 |
H17 |
1.100 |
1.089 |
| C19 |
H18 |
1.100 |
1.090 |
| C19 |
H19 |
1.100 |
1.090 |
| C24 |
H20 |
1.100 |
1.090 |
| C24 |
H21 |
1.101 |
1.089 |
| C25 |
H22 |
1.100 |
1.090 |
| C25 |
H23 |
1.100 |
1.090 |
| C26 |
H24 |
1.100 |
1.090 |
| C27 |
H25 |
1.100 |
1.090 |
| C27 |
H26 |
1.100 |
1.091 |
| C27 |
H27 |
1.100 |
1.090 |
| O27 |
H28 |
0.950 |
0.966 |
Bond Angles for 6VW
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O27 |
C26 |
H24 |
110.0 |
110.4 |
| C19 |
C18 |
H16 |
109.1 |
109.9 |
| C19 |
C18 |
H17 |
109.1 |
109.9 |
| C18 |
C19 |
H18 |
108.1 |
109.0 |
| C18 |
C19 |
H19 |
108.1 |
109.0 |
| C18 |
C17 |
C26 |
115.8 |
116.5 |
| C19 |
C13 |
H14 |
106.9 |
108.6 |
| C17 |
C26 |
C25 |
103.8 |
105.3 |
| C17 |
C26 |
H24 |
108.1 |
110.3 |
| C17 |
C16 |
C24 |
104.0 |
101.6 |
| C17 |
C16 |
H15 |
105.8 |
111.3 |
| C26 |
C25 |
H22 |
110.4 |
110.0 |
| C26 |
C25 |
H23 |
110.4 |
110.1 |
| C5 |
C6 |
C1 |
111.4 |
107.4 |
| C5 |
C6 |
H1 |
109.0 |
109.9 |
| C5 |
C6 |
H2 |
109.0 |
110.0 |
| C5 |
C4 |
C3 |
108.8 |
114.0 |
| C5 |
C4 |
H5 |
107.6 |
107.4 |
| C6 |
C1 |
O1 |
122.7 |
121.7 |
| C6 |
C1 |
C2 |
116.1 |
116.5 |
| C1 |
C6 |
H1 |
109.0 |
109.9 |
| C1 |
C6 |
H2 |
109.0 |
109.9 |
| C13 |
C4 |
H5 |
107.3 |
108.0 |
| C13 |
C12 |
H13 |
108.1 |
110.0 |
| C4 |
C3 |
C10 |
116.3 |
118.7 |
| C3 |
C4 |
H5 |
107.6 |
108.0 |
| C25 |
C24 |
H20 |
110.8 |
110.7 |
| C25 |
C24 |
H21 |
110.8 |
110.9 |
| C16 |
C12 |
H13 |
108.3 |
110.0 |
| C24 |
C16 |
H15 |
105.9 |
110.4 |
| C16 |
C24 |
H20 |
110.8 |
110.7 |
| C16 |
C24 |
H21 |
110.8 |
110.7 |
| C12 |
C11 |
H11 |
108.9 |
109.5 |
| C12 |
C11 |
H12 |
108.9 |
109.6 |
| C1 |
C2 |
H3 |
118.3 |
119.9 |
| C3 |
C2 |
H3 |
118.3 |
120.0 |
| C3 |
C10 |
H9 |
108.7 |
109.6 |
| C3 |
C10 |
H10 |
108.7 |
109.6 |
| C11 |
C10 |
H9 |
108.7 |
109.6 |
| C11 |
C10 |
H10 |
108.7 |
109.7 |
| H1 |
C6 |
H2 |
109.4 |
109.8 |
| H6 |
C5 |
H7 |
109.5 |
109.0 |
| H9 |
C10 |
H10 |
109.4 |
109.6 |
| H11 |
C11 |
H12 |
109.5 |
109.6 |
| H16 |
C18 |
H17 |
109.5 |
110.0 |
| H18 |
C19 |
H19 |
109.5 |
108.9 |
| H20 |
C24 |
H21 |
109.5 |
110.6 |
| H22 |
C25 |
H23 |
109.4 |
110.1 |
| H25 |
C27 |
H26 |
109.5 |
109.5 |
| H25 |
C27 |
H27 |
109.5 |
109.5 |
| H26 |
C27 |
H27 |
109.5 |
109.5 |
Torsion Angles for 6VW
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C17 |
C26 |
O27 |
H24 |
239.1 |
238.0 |
| O27 |
C26 |
C25 |
H22 |
269.1 |
3.2 |
| O27 |
C26 |
C25 |
H23 |
30.3 |
241.7 |
| C19 |
C18 |
C17 |
C26 |
166.3 |
180.3 |
| C18 |
C19 |
C13 |
H14 |
289.2 |
293.2 |
| H16 |
C18 |
C19 |
H17 |
240.5 |
121.2 |
| H18 |
C19 |
C18 |
H19 |
241.6 |
118.8 |
| C18 |
C17 |
C26 |
C25 |
199.5 |
213.7 |
| C18 |
C17 |
C26 |
H24 |
314.1 |
332.7 |
| C18 |
C17 |
C16 |
C24 |
168.3 |
167.8 |
| C18 |
C17 |
C16 |
H15 |
57.0 |
50.3 |
| C19 |
C13 |
C4 |
H5 |
296.1 |
301.9 |
| C19 |
C13 |
C12 |
H13 |
73.0 |
63.9 |
| C27 |
C17 |
C26 |
H24 |
189.4 |
206.8 |
| C27 |
C17 |
C16 |
H15 |
179.6 |
169.7 |
| O27 |
C26 |
C17 |
H24 |
121.9 |
122.1 |
| C26 |
C17 |
C16 |
C24 |
47.2 |
44.3 |
| C26 |
C17 |
C16 |
H15 |
295.9 |
286.8 |
| C17 |
C26 |
C25 |
H22 |
146.0 |
244.3 |
| C17 |
C26 |
C25 |
H23 |
267.2 |
122.8 |
| C17 |
C16 |
C12 |
H13 |
295.4 |
303.7 |
| C24 |
C16 |
C17 |
H15 |
111.3 |
117.5 |
| C17 |
C16 |
C24 |
H20 |
209.5 |
76.8 |
| C17 |
C16 |
C24 |
H21 |
87.8 |
199.9 |
| C17 |
C26 |
C25 |
H24 |
114.6 |
118.9 |
| C26 |
C25 |
C24 |
H20 |
122.0 |
265.6 |
| C26 |
C25 |
C24 |
H21 |
243.8 |
142.4 |
| H22 |
C25 |
C26 |
H23 |
238.8 |
121.5 |
| C5 |
C6 |
C1 |
O1 |
206.1 |
229.3 |
| C5 |
C6 |
C1 |
C2 |
26.5 |
49.2 |
| C1 |
C6 |
C5 |
H1 |
239.7 |
240.5 |
| C1 |
C6 |
C5 |
H2 |
120.3 |
119.5 |
| H1 |
C6 |
C5 |
H2 |
240.6 |
239.0 |
| C4 |
C5 |
C6 |
C1 |
302.8 |
302.0 |
| C4 |
C5 |
C6 |
H1 |
63.1 |
61.5 |
| C4 |
C5 |
C6 |
H2 |
182.5 |
182.5 |
| C13 |
C4 |
C5 |
H5 |
241.6 |
243.1 |
| C5 |
C4 |
C3 |
C10 |
171.6 |
171.6 |
| C3 |
C4 |
C5 |
H5 |
116.3 |
119.7 |
| C5 |
C6 |
C1 |
H1 |
120.3 |
119.5 |
| C5 |
C6 |
C1 |
H2 |
239.7 |
240.4 |
| C6 |
C1 |
C2 |
H3 |
184.6 |
159.2 |
| H1 |
C6 |
C1 |
H2 |
119.4 |
120.9 |
| C5 |
C4 |
C13 |
H5 |
118.5 |
116.5 |
| C3 |
C4 |
C13 |
H5 |
242.1 |
242.4 |
| C12 |
C13 |
C4 |
H5 |
63.5 |
64.5 |
| C16 |
C12 |
C13 |
H13 |
241.7 |
239.9 |
| C13 |
C12 |
C11 |
H11 |
58.5 |
174.9 |
| C13 |
C12 |
C11 |
H12 |
177.9 |
54.8 |
| C5 |
C4 |
C3 |
H5 |
243.7 |
240.7 |
| C13 |
C4 |
C3 |
H5 |
117.7 |
117.6 |
| C4 |
C3 |
C2 |
H3 |
175.3 |
179.4 |
| C4 |
C3 |
C10 |
H9 |
77.1 |
70.3 |
| C4 |
C3 |
C10 |
H10 |
196.1 |
190.7 |
| C17 |
C26 |
C25 |
C24 |
26.6 |
3.5 |
| C25 |
C24 |
C16 |
H15 |
79.9 |
76.6 |
| C16 |
C24 |
C25 |
H20 |
240.9 |
118.4 |
| C16 |
C24 |
C25 |
H21 |
119.1 |
241.5 |
| H20 |
C24 |
C25 |
H21 |
238.2 |
123.2 |
| C13 |
C12 |
C16 |
H13 |
118.2 |
120.1 |
| C16 |
C12 |
C11 |
H11 |
295.8 |
56.7 |
| C16 |
C12 |
C11 |
H12 |
55.1 |
296.5 |
| C17 |
C16 |
C24 |
H15 |
248.7 |
241.9 |
| C25 |
C24 |
C16 |
H20 |
119.1 |
241.6 |
| C25 |
C24 |
C16 |
H21 |
240.9 |
118.5 |
| C24 |
C16 |
C12 |
H13 |
59.8 |
56.2 |
| H20 |
C24 |
C16 |
H21 |
121.7 |
236.9 |
| C12 |
C11 |
C10 |
H9 |
290.9 |
295.5 |
| C12 |
C11 |
C10 |
H10 |
171.9 |
175.1 |
| H11 |
C11 |
C12 |
H12 |
240.6 |
120.2 |
| C6 |
C1 |
O1 |
C2 |
180.5 |
180.0 |
| O1 |
C1 |
C6 |
H1 |
85.7 |
109.8 |
| O1 |
C1 |
C6 |
H2 |
326.3 |
348.8 |
| O1 |
C1 |
C2 |
H3 |
5.0 |
339.2 |
| C6 |
C1 |
C2 |
O1 |
179.5 |
180.0 |
| C2 |
C1 |
C6 |
H1 |
266.2 |
289.7 |
| C2 |
C1 |
C6 |
H2 |
146.8 |
168.8 |
| C3 |
C2 |
C1 |
H3 |
180.0 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
180.0 |
| C10 |
C3 |
C4 |
H5 |
287.9 |
290.9 |
| C10 |
C3 |
C2 |
H3 |
337.3 |
358.3 |
| C11 |
C10 |
C3 |
H9 |
239.5 |
240.2 |
| C11 |
C10 |
C3 |
H10 |
120.5 |
119.9 |
| H9 |
C10 |
C3 |
H10 |
241.0 |
239.6 |
| C3 |
C10 |
C11 |
H9 |
120.5 |
119.8 |
| C3 |
C10 |
C11 |
H10 |
239.5 |
240.2 |
| H9 |
C10 |
C11 |
H10 |
119.0 |
120.4 |
| C5 |
C6 |
H1 |
C1 |
238.2 |
242.0 |
| C5 |
C6 |
H1 |
H2 |
119.1 |
121.1 |
| H1 |
C6 |
C1 |
O1 |
85.7 |
109.8 |
| H1 |
C6 |
C1 |
C2 |
266.2 |
289.7 |
| C1 |
C6 |
H1 |
H2 |
240.9 |
239.0 |
| C5 |
C6 |
H2 |
C1 |
121.8 |
118.0 |
| C5 |
C6 |
H2 |
H1 |
240.9 |
239.0 |
| H2 |
C6 |
C1 |
O1 |
326.3 |
348.8 |
| H2 |
C6 |
C1 |
C2 |
146.8 |
168.8 |
| C1 |
C6 |
H2 |
H1 |
119.1 |
121.0 |
| C5 |
C4 |
H5 |
C3 |
117.1 |
123.4 |
| H5 |
C4 |
C3 |
C10 |
287.9 |
290.9 |
| H6 |
C5 |
C6 |
C1 |
63.0 |
62.6 |
| H6 |
C5 |
C6 |
H1 |
183.3 |
182.0 |
| H6 |
C5 |
C6 |
H2 |
302.7 |
303.1 |
| H6 |
C5 |
C4 |
C3 |
295.7 |
279.1 |
| H6 |
C5 |
C4 |
H5 |
179.3 |
159.5 |
| H7 |
C5 |
C6 |
C1 |
182.7 |
181.4 |
| H7 |
C5 |
C6 |
H1 |
303.0 |
300.9 |
| H7 |
C5 |
C6 |
H2 |
62.4 |
61.9 |
| H7 |
C5 |
C4 |
C3 |
176.0 |
160.3 |
| H7 |
C5 |
C4 |
H5 |
59.7 |
40.6 |
| C3 |
C10 |
H9 |
H10 |
118.6 |
120.3 |
| C11 |
C10 |
H9 |
H10 |
241.5 |
239.6 |
| C3 |
C10 |
H10 |
H9 |
241.4 |
239.7 |
| C11 |
C10 |
H10 |
H9 |
118.5 |
120.4 |
| C12 |
C11 |
H11 |
H12 |
119.0 |
239.8 |
| H11 |
C11 |
C10 |
H9 |
170.6 |
55.4 |
| H11 |
C11 |
C10 |
H10 |
51.6 |
294.9 |
| C12 |
C11 |
H12 |
H11 |
241.0 |
120.1 |
| H12 |
C11 |
C10 |
H9 |
51.3 |
175.5 |
| H12 |
C11 |
C10 |
H10 |
292.3 |
55.1 |
| H13 |
C12 |
C11 |
H11 |
175.6 |
295.6 |
| H13 |
C12 |
C11 |
H12 |
294.9 |
175.4 |
| H14 |
C13 |
C4 |
H5 |
178.5 |
183.5 |
| H14 |
C13 |
C12 |
H13 |
190.5 |
184.0 |
| C17 |
C16 |
H15 |
C24 |
110.0 |
112.1 |
| H15 |
C16 |
C12 |
H13 |
179.0 |
182.4 |
| H15 |
C16 |
C24 |
H20 |
320.8 |
195.0 |
| H15 |
C16 |
C24 |
H21 |
199.1 |
318.0 |
| C19 |
C18 |
H16 |
H17 |
119.3 |
238.9 |
| H16 |
C18 |
C19 |
H18 |
188.6 |
62.8 |
| H16 |
C18 |
C19 |
H19 |
307.0 |
304.0 |
| H16 |
C18 |
C17 |
C26 |
46.1 |
299.5 |
| C19 |
C18 |
H17 |
H16 |
240.7 |
121.1 |
| H17 |
C18 |
C19 |
H18 |
308.1 |
301.6 |
| H17 |
C18 |
C19 |
H19 |
66.6 |
182.8 |
| H17 |
C18 |
C17 |
C26 |
286.5 |
60.9 |
| H18 |
C19 |
C18 |
H16 |
188.6 |
62.8 |
| H18 |
C19 |
C18 |
H17 |
308.1 |
301.6 |
| C18 |
C19 |
H18 |
H19 |
117.6 |
241.1 |
| H18 |
C19 |
C13 |
H14 |
168.4 |
53.6 |
| H19 |
C19 |
C18 |
H16 |
307.0 |
304.0 |
| H19 |
C19 |
C18 |
H17 |
66.6 |
182.8 |
| C18 |
C19 |
H19 |
H18 |
242.4 |
118.9 |
| H19 |
C19 |
C13 |
H14 |
49.9 |
172.5 |
| C25 |
C24 |
H20 |
H21 |
122.6 |
236.7 |
| H20 |
C24 |
C16 |
H15 |
320.8 |
195.0 |
| C16 |
C24 |
H20 |
H21 |
237.5 |
123.1 |
| C25 |
C24 |
H21 |
H20 |
237.4 |
123.3 |
| H21 |
C24 |
C16 |
H15 |
199.1 |
318.0 |
| C16 |
C24 |
H21 |
H20 |
122.5 |
236.9 |
| C26 |
C25 |
H22 |
H23 |
121.8 |
238.5 |
| H22 |
C25 |
C24 |
H20 |
2.6 |
24.7 |
| H22 |
C25 |
C24 |
H21 |
124.4 |
261.5 |
| C26 |
C25 |
H23 |
H22 |
238.2 |
121.5 |
| H23 |
C25 |
C24 |
H20 |
241.4 |
146.3 |
| H23 |
C25 |
C24 |
H21 |
3.2 |
23.1 |
| C17 |
C26 |
H24 |
C25 |
248.2 |
244.1 |
| H24 |
C26 |
C25 |
H22 |
31.4 |
125.3 |
| H24 |
C26 |
C25 |
H23 |
152.6 |
3.8 |
| H26 |
C27 |
H25 |
H27 |
120.0 |
120.0 |
| H25 |
C27 |
H26 |
H27 |
240.0 |
239.9 |
| H25 |
C27 |
H27 |
H26 |
120.0 |
120.1 |
| H28 |
O27 |
C26 |
H24 |
300.8 |
302.1 |