PDB Chemical Component 6T3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6T3
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C6 |
C7 |
1.378 |
1.380 |
C6 |
N2 |
1.311 |
1.320 |
C7 |
C2 |
1.390 |
1.401 |
C23 |
C24 |
1.374 |
1.383 |
C23 |
C22 |
1.374 |
1.401 |
C24 |
C25 |
1.398 |
1.387 |
N2 |
C4 |
1.340 |
1.340 |
C2 |
C22 |
1.472 |
1.487 |
C2 |
N3 |
1.349 |
1.333 |
C22 |
C27 |
1.408 |
1.395 |
C25 |
C26 |
1.374 |
1.380 |
C4 |
N3 |
1.333 |
1.314 |
C4 |
N14 |
1.364 |
1.392 |
C35 |
C34 |
1.522 |
1.508 |
C35 |
O30 |
1.434 |
1.433 |
C33 |
C34 |
1.325 |
1.311 |
C33 |
C32 |
1.532 |
1.507 |
C27 |
C26 |
1.393 |
1.380 |
C26 |
C29 |
1.498 |
1.509 |
N14 |
C15 |
1.371 |
1.401 |
C32 |
O31 |
1.433 |
1.427 |
O30 |
C29 |
1.404 |
1.432 |
O31 |
C28 |
1.432 |
1.437 |
C15 |
C16 |
1.376 |
1.383 |
C15 |
C20 |
1.402 |
1.395 |
C16 |
C17 |
1.384 |
1.384 |
C28 |
C17 |
1.514 |
1.515 |
C17 |
C18 |
1.372 |
1.384 |
C20 |
C19 |
1.404 |
1.383 |
C18 |
C19 |
1.370 |
1.394 |
C18 |
O1 |
1.364 |
1.360 |
C12 |
C11 |
1.504 |
1.540 |
C12 |
C13 |
1.525 |
1.547 |
C11 |
N4 |
1.492 |
1.478 |
C14 |
N4 |
1.467 |
1.486 |
C14 |
C13 |
1.518 |
1.549 |
N4 |
C9 |
1.454 |
1.469 |
O1 |
C8 |
1.465 |
1.429 |
C8 |
C9 |
1.493 |
1.531 |
C6 |
H1 |
1.080 |
1.080 |
C7 |
H2 |
1.080 |
1.081 |
N14 |
H3 |
1.000 |
0.970 |
C16 |
H4 |
1.080 |
1.080 |
C19 |
H5 |
1.080 |
1.080 |
C20 |
H6 |
1.079 |
1.080 |
C23 |
H7 |
1.080 |
1.080 |
C24 |
H8 |
1.080 |
1.079 |
C25 |
H9 |
1.080 |
1.080 |
C27 |
H10 |
1.079 |
1.080 |
C28 |
H11 |
1.100 |
1.090 |
C28 |
H12 |
1.100 |
1.091 |
C29 |
H13 |
1.100 |
1.089 |
C29 |
H14 |
1.100 |
1.090 |
C32 |
H15 |
1.100 |
1.090 |
C32 |
H16 |
1.100 |
1.089 |
C33 |
H17 |
1.079 |
1.081 |
C34 |
H18 |
1.080 |
1.080 |
C35 |
H19 |
1.100 |
1.089 |
C35 |
H20 |
1.100 |
1.090 |
C8 |
H21 |
1.100 |
1.090 |
C8 |
H22 |
1.101 |
1.090 |
C9 |
H23 |
1.100 |
1.090 |
C9 |
H24 |
1.100 |
1.090 |
C11 |
H26 |
1.100 |
1.090 |
C11 |
H27 |
1.100 |
1.091 |
C12 |
H28 |
1.100 |
1.089 |
C12 |
H29 |
1.100 |
1.089 |
C13 |
H30 |
1.100 |
1.090 |
C13 |
H31 |
1.100 |
1.090 |
C14 |
H32 |
1.100 |
1.090 |
C14 |
H33 |
1.100 |
1.091 |
Bond Angles for 6T3
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C7 |
C6 |
H1 |
120.3 |
120.3 |
C6 |
C7 |
H2 |
120.3 |
120.7 |
C7 |
C2 |
C22 |
124.6 |
118.6 |
C23 |
C24 |
C25 |
119.9 |
119.9 |
C24 |
C23 |
H7 |
119.3 |
120.0 |
C23 |
C24 |
H8 |
120.1 |
120.0 |
C23 |
C22 |
C27 |
118.4 |
119.5 |
C24 |
C25 |
C26 |
120.2 |
120.4 |
C25 |
C24 |
H8 |
120.0 |
120.1 |
C24 |
C25 |
H9 |
119.9 |
119.8 |
N2 |
C4 |
N14 |
117.7 |
113.8 |
N3 |
C2 |
C22 |
116.6 |
122.7 |
C2 |
C22 |
C27 |
119.3 |
120.3 |
C22 |
C27 |
C26 |
120.8 |
120.0 |
C22 |
C27 |
H10 |
119.6 |
120.1 |
C25 |
C26 |
C29 |
119.3 |
120.6 |
C26 |
C25 |
H9 |
119.9 |
119.8 |
C4 |
N14 |
C15 |
129.8 |
122.9 |
C4 |
N14 |
H3 |
115.1 |
118.5 |
C35 |
C34 |
H18 |
118.8 |
119.9 |
C34 |
C33 |
H17 |
119.8 |
119.5 |
C33 |
C34 |
H18 |
118.8 |
120.2 |
C33 |
C32 |
H15 |
108.9 |
109.4 |
C33 |
C32 |
H16 |
108.9 |
109.2 |
C27 |
C26 |
C29 |
121.3 |
119.1 |
C26 |
C29 |
H13 |
107.6 |
109.6 |
C26 |
C29 |
H14 |
107.6 |
109.6 |
N14 |
C15 |
C16 |
125.0 |
120.9 |
N14 |
C15 |
C20 |
117.0 |
119.2 |
C15 |
N14 |
H3 |
115.1 |
118.6 |
O30 |
C29 |
H13 |
107.6 |
109.6 |
O30 |
C29 |
H14 |
107.6 |
109.8 |
O31 |
C28 |
H11 |
110.3 |
109.9 |
O31 |
C28 |
H12 |
110.3 |
110.0 |
C16 |
C15 |
C20 |
118.0 |
119.9 |
C15 |
C16 |
C17 |
121.6 |
120.2 |
C15 |
C16 |
H4 |
119.2 |
119.9 |
C15 |
C20 |
C19 |
120.0 |
120.0 |
C15 |
C20 |
H6 |
120.0 |
120.0 |
C16 |
C17 |
C18 |
120.4 |
119.8 |
C17 |
C16 |
H4 |
119.2 |
119.9 |
C17 |
C18 |
C19 |
119.7 |
120.4 |
C20 |
C19 |
H5 |
119.9 |
120.3 |
C18 |
C19 |
H5 |
119.8 |
120.2 |
C18 |
O1 |
C8 |
116.4 |
117.0 |
C12 |
C11 |
H26 |
110.9 |
109.9 |
C12 |
C11 |
H27 |
110.9 |
110.1 |
C13 |
C12 |
H28 |
111.0 |
110.3 |
C13 |
C12 |
H29 |
111.0 |
110.3 |
C12 |
C13 |
H30 |
109.6 |
110.7 |
C12 |
C13 |
H31 |
109.6 |
110.7 |
C14 |
C13 |
H30 |
109.7 |
110.7 |
C14 |
C13 |
H31 |
109.6 |
110.8 |
N4 |
C9 |
H23 |
110.6 |
109.5 |
N4 |
C9 |
H24 |
110.6 |
109.5 |
O1 |
C8 |
C9 |
110.7 |
109.5 |
O1 |
C8 |
H21 |
109.1 |
109.5 |
O1 |
C8 |
H22 |
109.2 |
109.5 |
C9 |
C8 |
H21 |
109.2 |
109.5 |
C9 |
C8 |
H22 |
109.2 |
109.5 |
C8 |
C9 |
H23 |
110.5 |
109.4 |
C8 |
C9 |
H24 |
110.6 |
109.5 |
H11 |
C28 |
H12 |
109.5 |
109.9 |
H13 |
C29 |
H14 |
109.4 |
109.6 |
H15 |
C32 |
H16 |
109.5 |
109.3 |
H19 |
C35 |
H20 |
109.4 |
109.5 |
H21 |
C8 |
H22 |
109.5 |
109.5 |
H23 |
C9 |
H24 |
109.5 |
109.5 |
H26 |
C11 |
H27 |
109.5 |
109.9 |
H28 |
C12 |
H29 |
109.5 |
110.4 |
H30 |
C13 |
H31 |
109.5 |
110.7 |
H32 |
C14 |
H33 |
109.4 |
110.7 |
Torsion Angles for 6T3
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C7 |
C2 |
C22 |
181.2 |
182.6 |
C6 |
N2 |
C4 |
N14 |
180.7 |
181.2 |
N3 |
C2 |
C7 |
C22 |
177.2 |
181.9 |
C7 |
C2 |
C22 |
C27 |
178.2 |
198.4 |
C24 |
C23 |
C22 |
C27 |
359.0 |
1.5 |
C23 |
C24 |
C25 |
C26 |
358.7 |
359.1 |
C25 |
C24 |
C23 |
H8 |
180.0 |
180.1 |
C23 |
C24 |
C25 |
H9 |
178.7 |
179.1 |
C2 |
C22 |
C23 |
C27 |
183.6 |
179.0 |
C23 |
C22 |
C27 |
C26 |
1.9 |
358.3 |
C23 |
C22 |
C27 |
H10 |
181.9 |
178.3 |
C25 |
C24 |
C23 |
H7 |
180.7 |
179.9 |
C23 |
C24 |
C25 |
H8 |
180.0 |
179.9 |
C24 |
C25 |
C26 |
C29 |
185.1 |
180.2 |
C26 |
C25 |
C24 |
H9 |
180.0 |
180.0 |
N2 |
C4 |
N14 |
C15 |
182.4 |
113.1 |
N2 |
C4 |
N14 |
H3 |
2.4 |
293.1 |
C23 |
C22 |
C2 |
C27 |
176.4 |
181.0 |
C2 |
C22 |
C27 |
C26 |
178.4 |
179.3 |
C2 |
C22 |
C27 |
H10 |
358.4 |
359.3 |
C7 |
C2 |
N3 |
C22 |
182.6 |
178.0 |
N3 |
C2 |
C22 |
C27 |
1.0 |
16.4 |
C22 |
C27 |
C26 |
C29 |
174.5 |
181.1 |
C26 |
C25 |
C24 |
H8 |
178.7 |
179.1 |
C24 |
C25 |
C26 |
H9 |
180.0 |
180.0 |
C22 |
C27 |
C26 |
C25 |
357.5 |
0.6 |
C27 |
C26 |
C25 |
C29 |
177.1 |
180.4 |
C25 |
C26 |
C29 |
H13 |
71.9 |
6.1 |
C25 |
C26 |
C29 |
H14 |
189.8 |
126.5 |
C4 |
N3 |
C2 |
C22 |
181.6 |
176.3 |
C4 |
N14 |
C15 |
C16 |
337.0 |
36.8 |
C4 |
N14 |
C15 |
C20 |
154.9 |
218.6 |
C15 |
N14 |
C4 |
H3 |
180.0 |
180.0 |
C35 |
C34 |
C33 |
H17 |
0.7 |
358.1 |
C33 |
C34 |
C35 |
H18 |
180.0 |
180.7 |
C35 |
O30 |
C29 |
H13 |
168.7 |
76.4 |
C35 |
O30 |
C29 |
H14 |
50.8 |
316.0 |
C35 |
C34 |
C33 |
H18 |
180.0 |
179.3 |
C34 |
C33 |
C32 |
H15 |
240.6 |
323.7 |
C34 |
C33 |
C32 |
H16 |
359.9 |
204.1 |
H15 |
C32 |
C33 |
H16 |
240.6 |
119.6 |
C22 |
C27 |
C26 |
H10 |
180.0 |
180.0 |
C25 |
C26 |
C27 |
C29 |
183.0 |
179.6 |
C27 |
C26 |
C25 |
H9 |
182.1 |
180.7 |
C27 |
C26 |
C29 |
H13 |
254.9 |
185.7 |
C27 |
C26 |
C29 |
H14 |
12.8 |
306.1 |
C29 |
C26 |
C25 |
H9 |
5.1 |
0.2 |
O30 |
C29 |
C26 |
H13 |
238.9 |
240.2 |
O30 |
C29 |
C26 |
H14 |
121.1 |
119.9 |
H13 |
C29 |
C26 |
H14 |
242.1 |
239.6 |
C4 |
N14 |
C15 |
H3 |
180.0 |
180.0 |
C16 |
C15 |
N14 |
C20 |
182.2 |
178.2 |
N14 |
C15 |
C16 |
C17 |
179.3 |
178.2 |
N14 |
C15 |
C16 |
H4 |
359.3 |
358.1 |
N14 |
C15 |
C20 |
C19 |
180.0 |
180.5 |
N14 |
C15 |
C20 |
H6 |
360.0 |
0.4 |
C32 |
O31 |
C28 |
H11 |
288.1 |
47.6 |
C32 |
O31 |
C28 |
H12 |
49.1 |
286.4 |
C26 |
C29 |
O30 |
H13 |
121.1 |
119.8 |
C26 |
C29 |
O30 |
H14 |
238.9 |
240.2 |
H13 |
C29 |
O30 |
H14 |
117.9 |
120.5 |
H11 |
C28 |
O31 |
H12 |
239.0 |
121.2 |
N14 |
C15 |
C16 |
C20 |
177.8 |
181.8 |
C16 |
C15 |
N14 |
H3 |
157.0 |
216.8 |
C16 |
C15 |
C20 |
C19 |
358.0 |
2.2 |
C16 |
C15 |
C20 |
H6 |
178.0 |
182.2 |
C15 |
C16 |
C17 |
C18 |
359.1 |
2.8 |
C17 |
C16 |
C15 |
H4 |
180.0 |
180.0 |
N14 |
C15 |
C20 |
C16 |
182.0 |
178.2 |
C20 |
C15 |
N14 |
H3 |
334.9 |
38.6 |
C20 |
C15 |
C16 |
C17 |
1.5 |
356.4 |
C20 |
C15 |
C16 |
H4 |
181.5 |
176.3 |
C15 |
C20 |
C19 |
H5 |
182.1 |
180.1 |
C17 |
C16 |
C15 |
C20 |
1.5 |
356.4 |
C15 |
C16 |
C17 |
H4 |
180.0 |
180.0 |
C16 |
C17 |
C18 |
C19 |
0.9 |
359.5 |
C28 |
C17 |
C16 |
H4 |
359.8 |
4.7 |
C18 |
C17 |
C16 |
H4 |
179.1 |
182.8 |
C17 |
C18 |
C19 |
H5 |
178.5 |
179.1 |
C17 |
C18 |
O1 |
C8 |
198.8 |
180.0 |
C15 |
C20 |
C19 |
H6 |
180.0 |
179.9 |
C18 |
C19 |
C20 |
H5 |
180.0 |
179.9 |
C15 |
C20 |
C19 |
C18 |
2.1 |
360.0 |
C20 |
C19 |
C18 |
H5 |
180.0 |
180.1 |
C19 |
C18 |
O1 |
C8 |
16.0 |
0.0 |
C18 |
O1 |
C8 |
C9 |
158.1 |
180.0 |
C18 |
O1 |
C8 |
H21 |
278.3 |
300.0 |
C18 |
O1 |
C8 |
H22 |
37.9 |
60.0 |
H26 |
C11 |
C12 |
H27 |
238.1 |
121.1 |
C13 |
C12 |
C11 |
H26 |
136.7 |
241.8 |
C13 |
C12 |
C11 |
H27 |
258.6 |
120.7 |
C14 |
C13 |
C12 |
H30 |
240.1 |
241.7 |
C14 |
C13 |
C12 |
H31 |
119.9 |
118.5 |
H28 |
C12 |
C13 |
H29 |
122.0 |
122.2 |
H30 |
C13 |
C12 |
H31 |
239.8 |
236.8 |
C11 |
N4 |
C9 |
H23 |
10.9 |
70.0 |
C11 |
N4 |
C9 |
H24 |
132.3 |
310.0 |
C14 |
N4 |
C9 |
H23 |
241.1 |
312.6 |
C14 |
N4 |
C9 |
H24 |
2.5 |
192.6 |
C14 |
C13 |
C12 |
H28 |
207.7 |
263.1 |
C14 |
C13 |
C12 |
H29 |
85.6 |
140.8 |
C12 |
C13 |
C14 |
H30 |
119.9 |
118.3 |
C12 |
C13 |
C14 |
H31 |
240.1 |
241.6 |
H30 |
C13 |
C14 |
H31 |
120.2 |
123.2 |
N4 |
C9 |
C8 |
H21 |
176.5 |
305.0 |
N4 |
C9 |
C8 |
H22 |
56.9 |
185.0 |
C8 |
C9 |
N4 |
H23 |
240.7 |
120.0 |
C8 |
C9 |
N4 |
H24 |
119.3 |
240.0 |
H23 |
C9 |
N4 |
H24 |
238.6 |
120.0 |
C9 |
C8 |
O1 |
H21 |
239.8 |
240.0 |
C9 |
C8 |
O1 |
H22 |
120.2 |
120.0 |
O1 |
C8 |
C9 |
H23 |
177.4 |
185.0 |
O1 |
C8 |
C9 |
H24 |
56.0 |
305.0 |
H21 |
C8 |
O1 |
H22 |
240.4 |
239.9 |
N4 |
C9 |
C8 |
H23 |
119.3 |
240.0 |
N4 |
C9 |
C8 |
H24 |
240.7 |
120.0 |
O1 |
C8 |
C9 |
H21 |
120.2 |
120.0 |
O1 |
C8 |
C9 |
H22 |
239.8 |
240.0 |
H21 |
C8 |
C9 |
H22 |
119.6 |
120.0 |
H23 |
C9 |
C8 |
H24 |
121.4 |
240.0 |
H1 |
C6 |
C7 |
H2 |
359.1 |
359.4 |
H2 |
C7 |
C6 |
H1 |
359.1 |
359.4 |
H2 |
C7 |
C2 |
C22 |
1.2 |
2.6 |
C4 |
N14 |
H3 |
C15 |
180.0 |
180.0 |
H3 |
N14 |
C15 |
C16 |
157.0 |
216.8 |
H3 |
N14 |
C15 |
C20 |
334.9 |
38.6 |
H4 |
C16 |
C15 |
C20 |
181.5 |
176.3 |
C15 |
C16 |
H4 |
C17 |
180.0 |
180.0 |
H4 |
C16 |
C17 |
C18 |
179.1 |
182.8 |
C15 |
C20 |
H6 |
C19 |
180.0 |
180.1 |
H6 |
C20 |
C19 |
H5 |
2.1 |
0.1 |
H7 |
C23 |
C24 |
C25 |
180.7 |
179.9 |
H7 |
C23 |
C24 |
H8 |
0.7 |
359.8 |
H7 |
C23 |
C22 |
C27 |
179.0 |
181.4 |
C23 |
C24 |
H8 |
C25 |
180.0 |
180.1 |
H8 |
C24 |
C23 |
H7 |
0.7 |
359.8 |
H8 |
C24 |
C25 |
C26 |
178.7 |
179.1 |
H8 |
C24 |
C25 |
H9 |
358.7 |
359.2 |
C24 |
C25 |
H9 |
C26 |
180.0 |
180.0 |
H9 |
C25 |
C24 |
H8 |
358.7 |
359.2 |
H9 |
C25 |
C26 |
C29 |
5.1 |
0.2 |
C22 |
C27 |
H10 |
C26 |
180.0 |
180.0 |
H10 |
C27 |
C26 |
C29 |
354.5 |
1.0 |
O31 |
C28 |
H11 |
H12 |
121.5 |
238.8 |
O31 |
C28 |
H12 |
H11 |
238.5 |
121.2 |
C26 |
C29 |
H13 |
H14 |
116.7 |
120.3 |
O30 |
C29 |
H13 |
H14 |
243.3 |
239.5 |
C26 |
C29 |
H14 |
H13 |
243.3 |
239.7 |
O30 |
C29 |
H14 |
H13 |
116.7 |
120.4 |
C33 |
C32 |
H15 |
H16 |
119.0 |
240.5 |
C33 |
C32 |
H16 |
H15 |
241.0 |
119.6 |
H17 |
C33 |
C34 |
H18 |
180.7 |
178.7 |
H17 |
C33 |
C32 |
H15 |
60.6 |
143.9 |
H17 |
C33 |
C32 |
H16 |
179.9 |
24.3 |
H18 |
C34 |
C33 |
H17 |
180.7 |
178.7 |
H19 |
C35 |
C34 |
H18 |
72.0 |
152.9 |
H20 |
C35 |
C34 |
H18 |
191.8 |
32.8 |
O1 |
C8 |
H21 |
C9 |
238.9 |
240.0 |
O1 |
C8 |
H21 |
H22 |
119.4 |
120.0 |
C9 |
C8 |
H21 |
H22 |
240.6 |
240.0 |
H21 |
C8 |
C9 |
H23 |
57.2 |
65.0 |
H21 |
C8 |
C9 |
H24 |
295.9 |
185.0 |
O1 |
C8 |
H22 |
C9 |
121.1 |
120.0 |
O1 |
C8 |
H22 |
H21 |
240.6 |
240.0 |
C9 |
C8 |
H22 |
H21 |
119.4 |
120.0 |
H22 |
C8 |
C9 |
H23 |
297.6 |
305.0 |
H22 |
C8 |
C9 |
H24 |
176.2 |
64.9 |
N4 |
C9 |
H23 |
H24 |
122.1 |
240.0 |
H23 |
C9 |
C8 |
H21 |
57.2 |
65.0 |
H23 |
C9 |
C8 |
H22 |
297.6 |
305.0 |
C8 |
C9 |
H23 |
H24 |
238.0 |
120.0 |
N4 |
C9 |
H24 |
H23 |
238.0 |
120.0 |
H24 |
C9 |
C8 |
H21 |
295.9 |
185.0 |
H24 |
C9 |
C8 |
H22 |
176.2 |
64.9 |
C8 |
C9 |
H24 |
H23 |
122.0 |
240.0 |
C12 |
C11 |
H26 |
H27 |
122.8 |
238.8 |
C12 |
C11 |
H27 |
H26 |
237.3 |
121.1 |
H28 |
C12 |
C11 |
H26 |
255.7 |
0.7 |
H28 |
C12 |
C11 |
H27 |
17.6 |
239.6 |
C13 |
C12 |
H28 |
H29 |
237.1 |
237.9 |
H28 |
C12 |
C13 |
H30 |
327.6 |
21.4 |
H28 |
C12 |
C13 |
H31 |
87.8 |
144.6 |
H29 |
C12 |
C11 |
H26 |
17.8 |
123.0 |
H29 |
C12 |
C11 |
H27 |
139.7 |
1.9 |
C13 |
C12 |
H29 |
H28 |
122.9 |
122.1 |
H29 |
C12 |
C13 |
H30 |
205.6 |
259.2 |
H29 |
C12 |
C13 |
H31 |
325.8 |
22.3 |
H30 |
C13 |
C12 |
H28 |
327.6 |
21.4 |
H30 |
C13 |
C12 |
H29 |
205.6 |
259.2 |
C12 |
C13 |
H30 |
H31 |
120.3 |
123.2 |
C14 |
C13 |
H30 |
H31 |
239.7 |
236.7 |
H31 |
C13 |
C12 |
H28 |
87.8 |
144.6 |
H31 |
C13 |
C12 |
H29 |
325.8 |
22.3 |
C12 |
C13 |
H31 |
H30 |
239.7 |
236.8 |
C14 |
C13 |
H31 |
H30 |
120.3 |
123.3 |
H32 |
C14 |
C13 |
H30 |
155.3 |
85.8 |
H32 |
C14 |
C13 |
H31 |
35.0 |
322.5 |
H33 |
C14 |
C13 |
H30 |
31.3 |
322.7 |
H33 |
C14 |
C13 |
H31 |
271.1 |
199.4 |