PDB Chemical Component 6T2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6T2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O2 |
C26 |
1.357 |
1.444 |
O2 |
C24 |
1.622 |
1.442 |
C26 |
C23 |
1.465 |
1.540 |
C24 |
C23 |
1.539 |
1.541 |
C23 |
C5 |
1.529 |
1.530 |
C23 |
C27 |
1.524 |
1.530 |
C5 |
O1 |
1.441 |
1.429 |
N80 |
C50 |
1.472 |
1.469 |
O1 |
C13 |
1.387 |
1.360 |
C40 |
C50 |
1.536 |
1.532 |
C40 |
C30 |
1.478 |
1.530 |
C13 |
C18 |
1.375 |
1.391 |
C13 |
C12 |
1.402 |
1.381 |
C18 |
C19 |
1.378 |
1.378 |
C50 |
C60 |
1.546 |
1.531 |
C12 |
C10 |
1.390 |
1.396 |
C19 |
C9 |
1.370 |
1.387 |
C30 |
N4 |
1.486 |
1.469 |
C10 |
C9 |
1.380 |
1.405 |
C10 |
N2 |
1.379 |
1.359 |
C60 |
C70 |
1.522 |
1.531 |
C9 |
N1 |
1.377 |
1.385 |
N4 |
C70 |
1.505 |
1.469 |
N4 |
C11 |
1.403 |
1.394 |
N2 |
C1 |
1.335 |
1.300 |
N1 |
C1 |
1.371 |
1.363 |
N1 |
C2 |
1.393 |
1.395 |
N3 |
C2 |
1.322 |
1.315 |
N3 |
C7 |
1.369 |
1.336 |
C11 |
C7 |
1.431 |
1.411 |
C11 |
C14 |
1.357 |
1.379 |
C2 |
C3 |
1.411 |
1.401 |
C7 |
C6 |
1.404 |
1.416 |
C14 |
C15 |
1.398 |
1.391 |
C3 |
C4 |
1.366 |
1.362 |
C6 |
C4 |
1.399 |
1.410 |
C6 |
C16 |
1.417 |
1.404 |
C15 |
C16 |
1.370 |
1.362 |
C1 |
H1 |
1.080 |
1.080 |
C3 |
H2 |
1.080 |
1.080 |
C4 |
H3 |
1.080 |
1.080 |
C5 |
H4 |
1.100 |
1.090 |
C5 |
H5 |
1.100 |
1.089 |
C12 |
H6 |
1.080 |
1.080 |
C14 |
H7 |
1.081 |
1.080 |
C15 |
H8 |
1.080 |
1.080 |
C30 |
H9 |
1.100 |
1.091 |
C30 |
H10 |
1.100 |
1.090 |
C40 |
H11 |
1.100 |
1.090 |
C40 |
H12 |
1.100 |
1.090 |
C50 |
H13 |
1.100 |
1.089 |
N80 |
H14 |
1.000 |
1.009 |
N80 |
H15 |
1.000 |
1.009 |
C60 |
H17 |
1.099 |
1.090 |
C60 |
H18 |
1.100 |
1.090 |
C70 |
H19 |
1.100 |
1.091 |
C70 |
H20 |
1.100 |
1.089 |
C16 |
H21 |
1.080 |
1.080 |
C19 |
H22 |
1.080 |
1.080 |
C18 |
H23 |
1.080 |
1.080 |
C27 |
H24 |
1.100 |
1.090 |
C27 |
H25 |
1.100 |
1.091 |
C27 |
H26 |
1.100 |
1.090 |
C24 |
H27 |
1.100 |
1.090 |
C24 |
H28 |
1.100 |
1.090 |
C26 |
H29 |
1.100 |
1.090 |
C26 |
H30 |
1.100 |
1.090 |
Bond Angles for 6T2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2 |
C26 |
H29 |
113.5 |
113.8 |
O2 |
C26 |
H30 |
113.5 |
113.8 |
O2 |
C24 |
H27 |
116.1 |
113.9 |
O2 |
C24 |
H28 |
116.1 |
114.0 |
C23 |
C5 |
H4 |
110.6 |
109.5 |
C23 |
C5 |
H5 |
110.6 |
109.5 |
C23 |
C27 |
H24 |
109.5 |
109.5 |
C23 |
C27 |
H25 |
109.5 |
109.5 |
C23 |
C27 |
H26 |
109.5 |
109.5 |
C5 |
O1 |
C13 |
115.8 |
117.0 |
O1 |
C5 |
H4 |
110.5 |
109.5 |
O1 |
C5 |
H5 |
110.5 |
109.5 |
N80 |
C50 |
C60 |
110.3 |
109.5 |
N80 |
C50 |
H13 |
109.5 |
109.6 |
C40 |
C50 |
C60 |
108.4 |
109.2 |
C50 |
C40 |
H11 |
109.2 |
109.5 |
C50 |
C40 |
H12 |
109.2 |
109.5 |
C40 |
C50 |
H13 |
108.7 |
109.6 |
C40 |
C30 |
N4 |
112.6 |
109.5 |
C40 |
C30 |
H9 |
108.7 |
109.5 |
C40 |
C30 |
H10 |
108.7 |
109.5 |
C13 |
C18 |
C19 |
122.2 |
120.4 |
C13 |
C18 |
H23 |
118.9 |
119.8 |
C13 |
C12 |
H6 |
121.7 |
120.1 |
C18 |
C19 |
H22 |
121.1 |
120.1 |
C50 |
C60 |
C70 |
112.7 |
109.2 |
C60 |
C50 |
H13 |
108.5 |
109.5 |
C50 |
C60 |
H17 |
108.7 |
109.5 |
C50 |
C60 |
H18 |
108.6 |
109.5 |
C12 |
C10 |
N2 |
128.3 |
133.5 |
C30 |
N4 |
C70 |
110.7 |
111.2 |
N4 |
C30 |
H9 |
108.7 |
109.4 |
N4 |
C30 |
H10 |
108.7 |
109.4 |
C10 |
C9 |
N1 |
106.8 |
106.0 |
C70 |
C60 |
H17 |
108.6 |
109.5 |
C70 |
C60 |
H18 |
108.7 |
109.5 |
C60 |
C70 |
H19 |
109.3 |
109.4 |
C60 |
C70 |
H20 |
109.3 |
109.5 |
N4 |
C70 |
H19 |
109.3 |
109.4 |
N4 |
C70 |
H20 |
109.3 |
109.5 |
N2 |
C1 |
H1 |
124.1 |
124.9 |
N1 |
C1 |
H1 |
124.1 |
124.9 |
C11 |
C14 |
C15 |
123.4 |
120.8 |
C11 |
C14 |
H7 |
118.3 |
119.6 |
C2 |
C3 |
C4 |
118.0 |
119.9 |
C2 |
C3 |
H2 |
121.0 |
120.0 |
C7 |
C6 |
C16 |
119.8 |
119.7 |
C14 |
C15 |
C16 |
118.1 |
121.0 |
C15 |
C14 |
H7 |
118.3 |
119.6 |
C14 |
C15 |
H8 |
120.9 |
119.5 |
C4 |
C3 |
H2 |
121.0 |
120.1 |
C3 |
C4 |
H3 |
119.9 |
120.9 |
C6 |
C4 |
H3 |
119.9 |
120.8 |
C6 |
C16 |
C15 |
121.1 |
119.9 |
C6 |
C16 |
H21 |
119.5 |
120.0 |
C16 |
C15 |
H8 |
120.9 |
119.5 |
C15 |
C16 |
H21 |
119.5 |
120.1 |
H4 |
C5 |
H5 |
109.5 |
109.5 |
H9 |
C30 |
H10 |
109.4 |
109.5 |
H11 |
C40 |
H12 |
109.5 |
109.6 |
H14 |
N80 |
H15 |
109.4 |
111.0 |
H17 |
C60 |
H18 |
109.5 |
109.6 |
H19 |
C70 |
H20 |
109.5 |
109.5 |
H24 |
C27 |
H25 |
109.5 |
109.5 |
H24 |
C27 |
H26 |
109.5 |
109.5 |
H25 |
C27 |
H26 |
109.4 |
109.5 |
H27 |
C24 |
H28 |
109.5 |
113.0 |
H29 |
C26 |
H30 |
109.5 |
113.2 |
Torsion Angles for 6T2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C26 |
O2 |
C24 |
H27 |
114.5 |
269.9 |
C26 |
O2 |
C24 |
H28 |
245.4 |
138.2 |
H29 |
C26 |
O2 |
H30 |
234.2 |
131.7 |
H27 |
C24 |
O2 |
H28 |
229.1 |
131.7 |
C26 |
C23 |
C5 |
H4 |
178.7 |
321.5 |
C26 |
C23 |
C5 |
H5 |
300.1 |
201.5 |
C26 |
C23 |
C27 |
H24 |
180.0 |
278.5 |
C26 |
C23 |
C27 |
H25 |
300.0 |
38.5 |
C26 |
C23 |
C27 |
H26 |
60.0 |
158.5 |
C24 |
C23 |
C5 |
H4 |
284.6 |
57.9 |
C24 |
C23 |
C5 |
H5 |
46.0 |
297.9 |
C24 |
C23 |
C27 |
H24 |
79.8 |
182.2 |
C24 |
C23 |
C27 |
H25 |
199.8 |
302.1 |
C24 |
C23 |
C27 |
H26 |
319.7 |
62.1 |
O1 |
C5 |
C23 |
H4 |
240.7 |
120.0 |
O1 |
C5 |
C23 |
H5 |
119.3 |
240.0 |
H4 |
C5 |
C23 |
H5 |
238.6 |
120.0 |
C27 |
C23 |
C5 |
H4 |
46.3 |
189.7 |
C27 |
C23 |
C5 |
H5 |
167.7 |
69.6 |
H24 |
C27 |
C23 |
H25 |
240.0 |
240.0 |
H24 |
C27 |
C23 |
H26 |
120.0 |
120.0 |
H25 |
C27 |
C23 |
H26 |
240.0 |
240.0 |
C23 |
C5 |
O1 |
H4 |
119.3 |
240.0 |
C23 |
C5 |
O1 |
H5 |
240.7 |
120.0 |
H4 |
C5 |
O1 |
H5 |
121.4 |
240.0 |
C40 |
C50 |
N80 |
C60 |
239.6 |
240.4 |
N80 |
C50 |
C40 |
H11 |
297.2 |
57.6 |
N80 |
C50 |
C40 |
H12 |
56.9 |
297.5 |
C40 |
C50 |
N80 |
H13 |
120.2 |
120.2 |
N80 |
C50 |
C60 |
C70 |
183.4 |
182.5 |
C60 |
C50 |
N80 |
H13 |
240.6 |
239.8 |
N80 |
C50 |
C60 |
H17 |
303.8 |
302.3 |
N80 |
C50 |
C60 |
H18 |
62.9 |
62.5 |
C13 |
O1 |
C5 |
H4 |
50.9 |
300.0 |
C13 |
O1 |
C5 |
H5 |
289.5 |
60.0 |
O1 |
C13 |
C18 |
H23 |
2.2 |
360.0 |
O1 |
C13 |
C12 |
H6 |
357.2 |
0.0 |
N80 |
C50 |
C40 |
C60 |
121.5 |
119.8 |
N80 |
C50 |
C40 |
H13 |
239.3 |
239.8 |
C50 |
C40 |
C30 |
N4 |
300.3 |
300.8 |
C50 |
C40 |
C30 |
H9 |
60.8 |
60.8 |
C50 |
C40 |
C30 |
H10 |
179.8 |
180.8 |
C40 |
C50 |
C60 |
C70 |
305.5 |
302.3 |
C60 |
C50 |
C40 |
H13 |
117.8 |
119.9 |
C40 |
C50 |
C60 |
H17 |
66.0 |
62.2 |
C40 |
C50 |
C60 |
H18 |
185.0 |
182.4 |
H11 |
C40 |
C50 |
H12 |
240.3 |
120.1 |
C40 |
C30 |
N4 |
C70 |
59.3 |
61.7 |
N4 |
C30 |
C40 |
H9 |
239.5 |
240.0 |
N4 |
C30 |
C40 |
H10 |
120.5 |
120.0 |
H9 |
C30 |
C40 |
H10 |
241.0 |
240.0 |
C5 |
O1 |
C13 |
C18 |
6.7 |
359.9 |
C18 |
C13 |
C12 |
H6 |
176.7 |
180.0 |
C13 |
C18 |
C19 |
H22 |
180.5 |
179.9 |
C5 |
O1 |
C13 |
C12 |
186.1 |
179.9 |
C13 |
C12 |
C10 |
N2 |
180.6 |
180.0 |
C13 |
C18 |
C19 |
H23 |
180.0 |
179.9 |
N80 |
C50 |
C60 |
H13 |
120.0 |
120.2 |
C60 |
C50 |
C40 |
H11 |
175.8 |
297.7 |
C60 |
C50 |
C40 |
H12 |
295.4 |
177.6 |
C40 |
C50 |
C60 |
H13 |
242.1 |
240.0 |
C70 |
C60 |
C50 |
H17 |
239.6 |
240.1 |
C70 |
C60 |
C50 |
H18 |
120.5 |
119.9 |
C50 |
C60 |
C70 |
H19 |
174.9 |
179.2 |
C50 |
C60 |
C70 |
H20 |
294.8 |
299.2 |
H17 |
C60 |
C50 |
H18 |
240.9 |
239.8 |
C12 |
C10 |
C9 |
N1 |
181.6 |
180.0 |
C40 |
C30 |
N4 |
H9 |
120.5 |
120.0 |
C40 |
C30 |
N4 |
H10 |
239.5 |
240.0 |
C30 |
N4 |
C70 |
H19 |
184.6 |
178.3 |
C30 |
N4 |
C70 |
H20 |
64.7 |
58.3 |
H9 |
C30 |
N4 |
H10 |
119.0 |
119.9 |
N2 |
C10 |
C9 |
N1 |
1.8 |
0.0 |
C10 |
N2 |
C1 |
H1 |
181.7 |
180.0 |
C70 |
C60 |
C50 |
H13 |
63.4 |
62.3 |
C50 |
C60 |
C70 |
H17 |
120.5 |
119.9 |
C50 |
C60 |
C70 |
H18 |
239.5 |
240.1 |
C30 |
N4 |
C70 |
C60 |
304.6 |
298.3 |
N4 |
C70 |
C60 |
H19 |
239.9 |
240.0 |
N4 |
C70 |
C60 |
H20 |
120.1 |
120.1 |
H17 |
C60 |
C70 |
H18 |
119.1 |
120.2 |
H19 |
C70 |
C60 |
H20 |
240.1 |
240.0 |
C9 |
N1 |
C1 |
H1 |
179.4 |
180.0 |
C70 |
N4 |
C30 |
H9 |
298.8 |
301.7 |
C70 |
N4 |
C30 |
H10 |
179.8 |
181.8 |
N4 |
C70 |
C60 |
H17 |
294.4 |
299.3 |
N4 |
C70 |
C60 |
H18 |
175.3 |
179.2 |
C60 |
C70 |
N4 |
H19 |
120.1 |
120.0 |
C60 |
C70 |
N4 |
H20 |
239.9 |
239.9 |
H19 |
C70 |
N4 |
H20 |
119.8 |
120.0 |
N4 |
C11 |
C14 |
H7 |
1.5 |
0.0 |
N1 |
C1 |
N2 |
H1 |
180.0 |
179.7 |
N2 |
C1 |
N1 |
H1 |
180.0 |
180.3 |
C2 |
N1 |
C1 |
H1 |
7.0 |
0.0 |
N1 |
C2 |
C3 |
H2 |
358.5 |
359.7 |
N3 |
C2 |
C3 |
H2 |
185.8 |
179.9 |
N3 |
C7 |
C6 |
C16 |
180.5 |
180.0 |
C11 |
C7 |
C6 |
C16 |
1.8 |
360.0 |
C11 |
C14 |
C15 |
C16 |
357.0 |
360.0 |
C15 |
C14 |
C11 |
H7 |
180.0 |
180.0 |
C11 |
C14 |
C15 |
H8 |
176.9 |
180.0 |
C4 |
C3 |
C2 |
H2 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
H3 |
175.1 |
180.0 |
C7 |
C6 |
C4 |
H3 |
182.4 |
180.0 |
C7 |
C6 |
C16 |
C15 |
358.4 |
0.0 |
C7 |
C6 |
C16 |
H21 |
178.4 |
180.0 |
C11 |
C14 |
C15 |
H7 |
180.0 |
180.0 |
C6 |
C16 |
C15 |
C14 |
2.1 |
0.0 |
C16 |
C15 |
C14 |
H8 |
180.0 |
179.9 |
C14 |
C15 |
C16 |
H21 |
182.1 |
180.0 |
C2 |
C3 |
C4 |
H2 |
180.0 |
180.0 |
C6 |
C4 |
C3 |
H3 |
180.0 |
179.9 |
C6 |
C4 |
C3 |
H2 |
175.0 |
180.0 |
C3 |
C4 |
C6 |
H3 |
180.0 |
180.1 |
C14 |
C15 |
C16 |
C6 |
2.1 |
0.0 |
C16 |
C6 |
C4 |
H3 |
1.5 |
0.0 |
C6 |
C16 |
C15 |
H8 |
182.1 |
180.0 |
C15 |
C16 |
C6 |
H21 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
H7 |
177.0 |
180.0 |
C14 |
C15 |
C16 |
H8 |
180.0 |
180.1 |
C6 |
C16 |
C15 |
H21 |
180.0 |
180.0 |
C2 |
C3 |
H2 |
C4 |
180.0 |
180.0 |
H2 |
C3 |
C4 |
H3 |
355.1 |
0.1 |
H3 |
C4 |
C3 |
H2 |
355.1 |
0.1 |
C23 |
C5 |
H4 |
H5 |
122.0 |
240.0 |
H4 |
C5 |
O1 |
C13 |
50.9 |
300.0 |
O1 |
C5 |
H4 |
H5 |
238.0 |
120.0 |
C23 |
C5 |
H5 |
H4 |
238.0 |
120.0 |
H5 |
C5 |
O1 |
C13 |
289.5 |
60.0 |
O1 |
C5 |
H5 |
H4 |
122.0 |
240.0 |
H6 |
C12 |
C10 |
N2 |
0.6 |
360.0 |
C11 |
C14 |
H7 |
C15 |
180.0 |
180.0 |
H7 |
C14 |
C15 |
C16 |
177.0 |
180.0 |
H7 |
C14 |
C15 |
H8 |
357.0 |
0.0 |
C14 |
C15 |
H8 |
C16 |
180.0 |
179.9 |
H8 |
C15 |
C14 |
H7 |
357.0 |
0.0 |
H8 |
C15 |
C16 |
H21 |
2.1 |
360.0 |
C40 |
C30 |
H9 |
N4 |
237.2 |
239.9 |
C40 |
C30 |
H9 |
H10 |
118.6 |
120.0 |
H9 |
C30 |
N4 |
C70 |
298.8 |
301.7 |
N4 |
C30 |
H9 |
H10 |
241.4 |
240.1 |
C40 |
C30 |
H10 |
N4 |
122.8 |
120.1 |
C40 |
C30 |
H10 |
H9 |
241.4 |
240.0 |
H10 |
C30 |
N4 |
C70 |
179.8 |
181.8 |
N4 |
C30 |
H10 |
H9 |
118.6 |
119.9 |
H11 |
C40 |
C50 |
C60 |
175.8 |
297.7 |
C50 |
C40 |
H11 |
H12 |
119.5 |
239.9 |
H11 |
C40 |
C50 |
H13 |
58.0 |
177.8 |
H11 |
C40 |
C30 |
N4 |
180.2 |
60.8 |
H11 |
C40 |
C30 |
H9 |
300.7 |
180.7 |
H11 |
C40 |
C30 |
H10 |
59.7 |
300.7 |
H12 |
C40 |
C50 |
C60 |
295.4 |
177.6 |
C50 |
C40 |
H12 |
H11 |
240.5 |
120.1 |
H12 |
C40 |
C50 |
H13 |
177.7 |
57.7 |
H12 |
C40 |
C30 |
N4 |
60.5 |
180.9 |
H12 |
C40 |
C30 |
H9 |
180.9 |
300.9 |
H12 |
C40 |
C30 |
H10 |
300.0 |
60.9 |
N80 |
C50 |
H13 |
C60 |
239.6 |
239.9 |
C40 |
C50 |
H13 |
C60 |
117.7 |
119.7 |
H13 |
C50 |
C40 |
H11 |
58.0 |
177.8 |
H13 |
C50 |
C40 |
H12 |
177.7 |
57.7 |
H13 |
C50 |
C60 |
C70 |
63.4 |
62.3 |
H13 |
C50 |
C60 |
H17 |
183.8 |
182.1 |
H13 |
C50 |
C60 |
H18 |
302.9 |
302.3 |
H14 |
N80 |
C50 |
C60 |
300.4 |
299.6 |
H14 |
N80 |
C50 |
H13 |
59.8 |
59.8 |
H15 |
N80 |
C50 |
C60 |
60.4 |
63.6 |
H15 |
N80 |
C50 |
H13 |
179.7 |
183.8 |
C50 |
C60 |
H17 |
C70 |
237.1 |
240.3 |
H17 |
C60 |
C50 |
H13 |
183.8 |
182.1 |
C50 |
C60 |
H17 |
H18 |
118.5 |
120.2 |
C70 |
C60 |
H17 |
H18 |
241.4 |
239.9 |
H17 |
C60 |
C70 |
H19 |
54.4 |
59.3 |
H17 |
C60 |
C70 |
H20 |
174.3 |
179.3 |
C50 |
C60 |
H18 |
C70 |
122.9 |
119.7 |
H18 |
C60 |
C50 |
H13 |
302.9 |
302.3 |
C50 |
C60 |
H18 |
H17 |
241.4 |
239.8 |
C70 |
C60 |
H18 |
H17 |
118.5 |
120.1 |
H18 |
C60 |
C70 |
H19 |
295.4 |
299.1 |
H18 |
C60 |
C70 |
H20 |
55.2 |
59.1 |
H19 |
C70 |
C60 |
H17 |
54.4 |
59.3 |
H19 |
C70 |
C60 |
H18 |
295.4 |
299.1 |
C60 |
C70 |
H19 |
H20 |
119.8 |
120.0 |
N4 |
C70 |
H19 |
H20 |
240.3 |
240.0 |
H20 |
C70 |
C60 |
H17 |
174.3 |
179.3 |
H20 |
C70 |
C60 |
H18 |
55.2 |
59.1 |
C60 |
C70 |
H20 |
H19 |
240.2 |
240.0 |
N4 |
C70 |
H20 |
H19 |
119.7 |
119.9 |
C6 |
C16 |
H21 |
C15 |
180.0 |
180.0 |
H21 |
C16 |
C15 |
H8 |
2.1 |
360.0 |
C13 |
C18 |
H23 |
C19 |
180.0 |
180.1 |
H23 |
C18 |
C19 |
H22 |
0.5 |
360.0 |
C23 |
C27 |
H24 |
H25 |
120.0 |
120.0 |
C23 |
C27 |
H24 |
H26 |
240.0 |
240.0 |
H25 |
C27 |
H24 |
H26 |
120.0 |
120.0 |
C23 |
C27 |
H25 |
H24 |
240.0 |
240.0 |
C23 |
C27 |
H25 |
H26 |
120.0 |
120.0 |
H24 |
C27 |
H25 |
H26 |
240.0 |
240.0 |
C23 |
C27 |
H26 |
H24 |
120.0 |
120.0 |
C23 |
C27 |
H26 |
H25 |
240.0 |
240.0 |
H24 |
C27 |
H26 |
H25 |
120.0 |
120.0 |
O2 |
C24 |
H27 |
H28 |
133.9 |
227.8 |
O2 |
C24 |
H28 |
H27 |
226.1 |
132.1 |
O2 |
C26 |
H29 |
H30 |
127.9 |
228.0 |
O2 |
C26 |
H30 |
H29 |
232.1 |
132.0 |