PDB Chemical Component 6S3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6S3
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
CAY |
NAV |
1.471 |
1.469 |
CAU |
NAV |
1.469 |
1.469 |
CAU |
CAT |
1.520 |
1.530 |
NAV |
CAW |
1.469 |
1.470 |
CAW |
CAX |
1.520 |
1.531 |
CAT |
NAS |
1.480 |
1.470 |
NAS |
CAX |
1.480 |
1.470 |
NAS |
CAP |
1.340 |
1.394 |
CAQ |
CAP |
1.390 |
1.390 |
CAQ |
CAR |
1.390 |
1.378 |
CAP |
CAO |
1.390 |
1.391 |
CAR |
CAM |
1.390 |
1.397 |
CAL |
NAG |
1.480 |
1.465 |
CAO |
CAN |
1.390 |
1.378 |
CAM |
CAN |
1.390 |
1.396 |
CAM |
CAH |
1.480 |
1.477 |
NAG |
CAH |
1.326 |
1.377 |
NAG |
CAF |
1.330 |
1.377 |
CAH |
CAI |
1.327 |
1.358 |
CAF |
NAC |
1.342 |
1.321 |
CAF |
CAE |
1.338 |
1.413 |
NAC |
CAB |
1.340 |
1.327 |
CAI |
CAE |
1.332 |
1.415 |
NAZ |
CAJ |
1.329 |
1.348 |
CAE |
CAD |
1.331 |
1.402 |
CAB |
CAJ |
1.500 |
1.478 |
CAB |
CAA |
1.387 |
1.398 |
CAJ |
OBA |
1.230 |
1.216 |
CAD |
CAA |
1.388 |
1.371 |
CAD |
CLAK |
1.725 |
1.736 |
CAT |
H1 |
1.100 |
1.090 |
CAT |
H2 |
1.100 |
1.089 |
CAU |
H3 |
1.100 |
1.091 |
CAU |
H4 |
1.100 |
1.090 |
CAY |
H6 |
1.100 |
1.090 |
CAY |
H7 |
1.100 |
1.090 |
CAY |
H8 |
1.100 |
1.090 |
CAW |
H9 |
1.100 |
1.090 |
CAW |
H10 |
1.099 |
1.089 |
CAX |
H11 |
1.100 |
1.089 |
CAX |
H12 |
1.100 |
1.090 |
CAO |
H13 |
1.080 |
1.080 |
CAN |
H14 |
1.080 |
1.081 |
CAQ |
H15 |
1.080 |
1.080 |
CAR |
H16 |
1.081 |
1.080 |
CAI |
H17 |
1.080 |
1.080 |
CAA |
H18 |
1.080 |
1.080 |
NAZ |
H19 |
1.001 |
0.970 |
NAZ |
H20 |
1.000 |
0.971 |
CAL |
H21 |
1.101 |
1.090 |
CAL |
H22 |
1.100 |
1.090 |
CAL |
H23 |
1.100 |
1.090 |
Bond Angles for 6S3
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAY |
NAV |
CAW |
109.5 |
111.0 |
CAU |
NAV |
CAW |
109.5 |
110.9 |
NAV |
CAU |
H3 |
109.1 |
109.5 |
NAV |
CAU |
H4 |
109.1 |
109.5 |
CAU |
CAT |
NAS |
111.0 |
109.3 |
CAU |
CAT |
H1 |
109.1 |
109.5 |
CAU |
CAT |
H2 |
109.1 |
109.6 |
NAV |
CAW |
CAX |
111.0 |
109.3 |
NAV |
CAW |
H9 |
109.1 |
109.5 |
NAV |
CAW |
H10 |
109.1 |
109.5 |
CAX |
CAW |
H9 |
109.1 |
109.5 |
CAX |
CAW |
H10 |
109.1 |
109.5 |
CAW |
CAX |
H11 |
109.1 |
109.5 |
CAW |
CAX |
H12 |
109.1 |
109.5 |
CAT |
NAS |
CAX |
114.0 |
110.9 |
CAT |
NAS |
CAP |
123.0 |
111.0 |
NAS |
CAT |
H1 |
109.1 |
109.4 |
NAS |
CAT |
H2 |
109.1 |
109.4 |
NAS |
CAX |
H11 |
109.1 |
109.5 |
NAS |
CAX |
H12 |
109.1 |
109.5 |
NAS |
CAP |
CAO |
120.0 |
119.9 |
CAQ |
CAR |
CAM |
120.0 |
119.9 |
CAR |
CAQ |
H15 |
120.0 |
119.9 |
CAQ |
CAR |
H16 |
120.0 |
120.0 |
CAP |
CAO |
CAN |
120.0 |
120.1 |
CAP |
CAO |
H13 |
120.0 |
120.0 |
CAR |
CAM |
CAH |
120.0 |
120.0 |
CAM |
CAR |
H16 |
120.0 |
120.1 |
CAN |
CAO |
H13 |
120.0 |
119.9 |
CAO |
CAN |
H14 |
120.0 |
120.0 |
CAM |
CAN |
H14 |
120.0 |
120.1 |
CAM |
CAH |
CAI |
125.0 |
125.3 |
CAH |
CAI |
CAE |
106.7 |
107.7 |
CAH |
CAI |
H17 |
126.6 |
126.2 |
CAI |
CAE |
CAD |
131.3 |
133.6 |
CAE |
CAI |
H17 |
126.6 |
126.1 |
CAE |
CAD |
CAA |
119.9 |
118.2 |
CAE |
CAD |
CLAK |
120.0 |
120.9 |
CAB |
CAJ |
OBA |
121.0 |
120.0 |
CAB |
CAA |
H18 |
120.8 |
120.2 |
CLAK |
CAD |
CAA |
120.0 |
120.9 |
CAD |
CAA |
H18 |
120.7 |
120.2 |
H1 |
CAT |
H2 |
109.4 |
109.5 |
H3 |
CAU |
H4 |
109.5 |
109.5 |
H6 |
CAY |
H7 |
109.4 |
109.5 |
H6 |
CAY |
H8 |
109.5 |
109.5 |
H7 |
CAY |
H8 |
109.5 |
109.5 |
H9 |
CAW |
H10 |
109.5 |
109.5 |
H11 |
CAX |
H12 |
109.5 |
109.5 |
H19 |
NAZ |
H20 |
120.0 |
120.0 |
H21 |
CAL |
H22 |
109.5 |
109.4 |
H21 |
CAL |
H23 |
109.4 |
109.5 |
H22 |
CAL |
H23 |
109.4 |
109.5 |
Torsion Angles for 6S3
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
CAU |
NAV |
CAY |
CAW |
120.1 |
123.8 |
CAY |
NAV |
CAU |
H3 |
299.6 |
56.9 |
CAY |
NAV |
CAU |
H4 |
59.2 |
296.8 |
CAY |
NAV |
CAW |
CAX |
180.6 |
183.2 |
CAY |
NAV |
CAW |
H9 |
300.8 |
303.2 |
CAY |
NAV |
CAW |
H10 |
60.4 |
63.2 |
CAY |
NAV |
CAU |
CAW |
239.9 |
236.2 |
NAV |
CAU |
CAT |
NAS |
54.7 |
58.5 |
NAV |
CAU |
CAT |
H1 |
175.0 |
178.4 |
NAV |
CAU |
CAT |
H2 |
294.5 |
298.5 |
CAU |
NAV |
CAW |
CAX |
60.5 |
59.4 |
CAU |
NAV |
CAW |
H9 |
180.7 |
179.3 |
CAU |
NAV |
CAW |
H10 |
300.3 |
299.4 |
H3 |
CAU |
NAV |
H4 |
240.5 |
120.0 |
CAU |
CAT |
NAS |
CAX |
310.2 |
300.7 |
CAU |
CAT |
NAS |
CAP |
130.2 |
176.8 |
NAS |
CAT |
CAU |
H1 |
239.8 |
240.1 |
NAS |
CAT |
CAU |
H2 |
120.2 |
120.0 |
H1 |
CAT |
CAU |
H2 |
240.5 |
239.8 |
CAW |
NAV |
CAU |
H3 |
59.7 |
180.7 |
CAW |
NAV |
CAU |
H4 |
179.2 |
60.7 |
CAX |
CAW |
NAV |
H9 |
239.8 |
240.1 |
CAX |
CAW |
NAV |
H10 |
120.2 |
120.0 |
NAV |
CAW |
CAX |
H11 |
65.5 |
61.6 |
NAV |
CAW |
CAX |
H12 |
185.0 |
181.6 |
H9 |
CAW |
NAV |
H10 |
240.4 |
240.0 |
NAV |
CAW |
CAX |
H9 |
120.2 |
119.9 |
NAV |
CAW |
CAX |
H10 |
239.8 |
240.0 |
CAT |
NAS |
CAX |
CAW |
49.8 |
59.3 |
NAS |
CAX |
CAW |
H11 |
239.8 |
240.0 |
NAS |
CAX |
CAW |
H12 |
120.2 |
119.9 |
H9 |
CAW |
CAX |
H10 |
119.5 |
120.0 |
H11 |
CAX |
CAW |
H12 |
240.5 |
239.9 |
CAU |
CAT |
NAS |
H1 |
120.2 |
120.0 |
CAU |
CAT |
NAS |
H2 |
239.7 |
240.0 |
CAT |
NAS |
CAX |
H11 |
289.5 |
299.4 |
CAT |
NAS |
CAX |
H12 |
170.0 |
179.3 |
CAT |
NAS |
CAP |
CAO |
151.0 |
180.0 |
H1 |
CAT |
NAS |
H2 |
119.5 |
120.0 |
NAS |
CAX |
CAW |
H9 |
185.0 |
181.6 |
NAS |
CAX |
CAW |
H10 |
65.5 |
61.6 |
CAW |
CAX |
NAS |
H11 |
120.3 |
120.0 |
CAW |
CAX |
NAS |
H12 |
239.7 |
240.1 |
CAT |
NAS |
CAX |
CAP |
180.0 |
236.1 |
CAX |
NAS |
CAT |
H1 |
190.0 |
180.7 |
CAX |
NAS |
CAT |
H2 |
70.5 |
60.7 |
H11 |
CAX |
NAS |
H12 |
119.5 |
120.1 |
CAT |
NAS |
CAP |
CAX |
180.0 |
123.8 |
CAP |
NAS |
CAT |
H1 |
10.0 |
56.8 |
CAP |
NAS |
CAT |
H2 |
250.5 |
296.8 |
CAP |
NAS |
CAX |
H11 |
109.5 |
63.2 |
CAP |
NAS |
CAX |
H12 |
350.0 |
303.1 |
NAS |
CAP |
CAO |
CAN |
180.0 |
180.0 |
NAS |
CAP |
CAO |
H13 |
360.0 |
359.9 |
CAQ |
CAP |
CAO |
H13 |
180.0 |
180.2 |
CAQ |
CAR |
CAM |
CAH |
180.0 |
180.0 |
CAM |
CAR |
CAQ |
H16 |
180.0 |
179.9 |
CAN |
CAO |
CAP |
H13 |
180.0 |
180.1 |
CAP |
CAO |
CAN |
H14 |
180.0 |
180.0 |
CAM |
CAR |
CAQ |
H15 |
179.9 |
180.0 |
CAQ |
CAR |
CAM |
H16 |
180.0 |
180.1 |
CAR |
CAM |
CAN |
H14 |
180.0 |
179.7 |
CAR |
CAM |
CAH |
CAI |
143.7 |
158.2 |
CAP |
CAO |
CAN |
H13 |
180.0 |
179.9 |
CAM |
CAN |
CAO |
H14 |
180.0 |
180.0 |
CAM |
CAN |
CAO |
H13 |
180.0 |
180.1 |
CAO |
CAN |
CAM |
H14 |
180.0 |
180.0 |
CAH |
CAM |
CAR |
H16 |
0.0 |
360.0 |
CAH |
CAM |
CAN |
H14 |
0.0 |
0.0 |
CAM |
CAH |
CAI |
CAE |
180.0 |
179.9 |
CAM |
CAH |
CAI |
H17 |
360.0 |
359.8 |
NAG |
CAH |
CAI |
H17 |
179.9 |
180.2 |
CAH |
CAI |
CAE |
CAD |
180.0 |
180.0 |
CAE |
CAI |
CAH |
H17 |
180.0 |
180.1 |
CAF |
CAE |
CAI |
H17 |
180.0 |
180.1 |
NAC |
CAB |
CAA |
H18 |
180.0 |
180.0 |
CAH |
CAI |
CAE |
H17 |
180.0 |
179.9 |
CAI |
CAE |
CAD |
CAA |
180.0 |
180.0 |
CAI |
CAE |
CAD |
CLAK |
0.1 |
0.0 |
CAD |
CAE |
CAI |
H17 |
360.0 |
0.1 |
CLAK |
CAD |
CAE |
CAA |
180.1 |
180.1 |
CAE |
CAD |
CAA |
H18 |
180.0 |
180.0 |
CAJ |
CAB |
CAA |
H18 |
360.0 |
360.0 |
CAD |
CAA |
CAB |
H18 |
180.0 |
180.0 |
CAE |
CAD |
CAA |
CLAK |
180.1 |
180.1 |
CAB |
CAA |
CAD |
H18 |
180.0 |
180.0 |
CAE |
CAD |
CLAK |
CAA |
179.9 |
179.9 |
CLAK |
CAD |
CAA |
H18 |
360.0 |
359.9 |
CAU |
CAT |
H1 |
NAS |
238.6 |
240.2 |
CAU |
CAT |
H1 |
H2 |
119.3 |
120.2 |
H1 |
CAT |
NAS |
CAX |
190.0 |
180.7 |
H1 |
CAT |
NAS |
CAP |
10.0 |
56.8 |
NAS |
CAT |
H1 |
H2 |
240.7 |
240.0 |
CAU |
CAT |
H2 |
NAS |
121.4 |
119.9 |
CAU |
CAT |
H2 |
H1 |
240.7 |
239.8 |
H2 |
CAT |
NAS |
CAX |
70.5 |
60.7 |
H2 |
CAT |
NAS |
CAP |
250.5 |
296.8 |
NAS |
CAT |
H2 |
H1 |
119.3 |
119.9 |
H3 |
CAU |
NAV |
CAW |
59.7 |
180.7 |
NAV |
CAU |
H3 |
H4 |
119.3 |
240.0 |
H3 |
CAU |
CAT |
NAS |
294.5 |
178.4 |
H3 |
CAU |
CAT |
H1 |
54.7 |
298.3 |
H3 |
CAU |
CAT |
H2 |
174.3 |
58.4 |
H4 |
CAU |
NAV |
CAW |
179.2 |
60.7 |
NAV |
CAU |
H4 |
H3 |
240.7 |
120.0 |
H4 |
CAU |
CAT |
NAS |
175.0 |
298.4 |
H4 |
CAU |
CAT |
H1 |
295.2 |
58.3 |
H4 |
CAU |
CAT |
H2 |
54.7 |
178.5 |
H6 |
CAY |
NAV |
CAW |
59.9 |
296.2 |
H7 |
CAY |
H6 |
H8 |
120.0 |
120.0 |
H7 |
CAY |
NAV |
CAW |
179.9 |
56.2 |
H6 |
CAY |
H7 |
H8 |
240.0 |
240.0 |
H8 |
CAY |
NAV |
CAW |
299.9 |
176.3 |
H6 |
CAY |
H8 |
H7 |
120.0 |
120.0 |
NAV |
CAW |
H9 |
CAX |
238.6 |
240.1 |
NAV |
CAW |
H9 |
H10 |
119.3 |
120.1 |
CAX |
CAW |
H9 |
H10 |
240.7 |
239.9 |
H9 |
CAW |
CAX |
H11 |
305.2 |
301.6 |
H9 |
CAW |
CAX |
H12 |
64.8 |
61.7 |
NAV |
CAW |
H10 |
CAX |
121.4 |
119.9 |
NAV |
CAW |
H10 |
H9 |
240.7 |
240.0 |
CAX |
CAW |
H10 |
H9 |
119.3 |
120.1 |
H10 |
CAW |
CAX |
H11 |
185.7 |
181.6 |
H10 |
CAW |
CAX |
H12 |
305.2 |
301.6 |
H11 |
CAX |
CAW |
H9 |
305.2 |
301.6 |
H11 |
CAX |
CAW |
H10 |
185.7 |
181.6 |
CAW |
CAX |
H11 |
H12 |
119.3 |
120.0 |
NAS |
CAX |
H11 |
H12 |
240.7 |
239.9 |
H12 |
CAX |
CAW |
H9 |
64.8 |
61.7 |
H12 |
CAX |
CAW |
H10 |
305.2 |
301.6 |
CAW |
CAX |
H12 |
H11 |
240.7 |
240.0 |
NAS |
CAX |
H12 |
H11 |
119.3 |
120.1 |
CAP |
CAO |
H13 |
CAN |
180.0 |
180.1 |
H13 |
CAO |
CAN |
H14 |
360.0 |
0.0 |
H14 |
CAN |
CAO |
H13 |
360.0 |
0.0 |
H15 |
CAQ |
CAR |
CAM |
179.9 |
180.0 |
H15 |
CAQ |
CAR |
H16 |
360.0 |
0.1 |
CAQ |
CAR |
H16 |
CAM |
180.0 |
179.9 |
H16 |
CAR |
CAQ |
H15 |
360.0 |
0.1 |
H16 |
CAR |
CAM |
CAH |
0.0 |
360.0 |
CAH |
CAI |
H17 |
CAE |
180.0 |
180.1 |
H17 |
CAI |
CAE |
CAD |
360.0 |
0.1 |
H22 |
CAL |
H21 |
H23 |
119.9 |
120.0 |
H21 |
CAL |
H22 |
H23 |
240.1 |
240.0 |
H21 |
CAL |
H23 |
H22 |
119.9 |
119.9 |