PDB Chemical Component 6OB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 6OB

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C10 C11 1.524 1.530
C10 C9 1.509 1.508
C18 C17 1.514 1.530
C17 C16 1.523 1.531
C16 C15 1.524 1.530
C15 C14 1.524 1.531
C14 C13 1.511 1.507
C13 C12 1.329 1.310
C12 C11 1.511 1.507
C9 C8 1.331 1.310
C8 C7 1.510 1.507
C7 C6 1.511 1.507
C6 O3 1.220 1.208
C6 C5 1.509 1.506
C5 C4 1.525 1.529
C4 C3 1.524 1.531
C3 C2 1.523 1.529
C2 C1 1.510 1.506
C1 O1 1.249 1.209
C1 O2 1.251 1.343
C10 H10 1.100 1.090
C11 H111 1.100 1.090
C11 H112 1.099 1.089
C9 H9 1.080 1.080
C18 H181 1.099 1.091
C18 H182 1.100 1.090
C18 H183 1.100 1.089
C17 H171 1.100 1.090
C17 H172 1.100 1.090
C16 H161 1.100 1.090
C16 H162 1.100 1.090
C15 H151 1.100 1.091
C15 H152 1.100 1.090
C14 H141 1.099 1.090
C14 H142 1.100 1.090
C13 H13 1.080 1.080
C12 H12 1.080 1.080
C8 HA 1.080 1.081
C7 HA1 1.100 1.089
C7 HB2 1.100 1.090
C5 HB1 1.101 1.090
C5 HC2 1.100 1.090
C4 HC1 1.100 1.090
C4 HD2 1.100 1.090
C3 HD1 1.100 1.090
C3 HE2 1.100 1.090
C2 HE1 1.100 1.090
C2 HF2 1.100 1.090
O2 HB 0.950 0.967
OXT HOT 0.950 0.966
OXT C10 1.781 1.429

Bond Angles for 6OB

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C11 C10 C9 109.5 109.5
C10 C11 C12 109.4 109.5
C11 C10 H10 108.7 109.5
C10 C11 H111 109.5 109.5
C10 C11 H112 109.5 109.5
C10 C9 C8 120.0 120.0
C9 C10 H10 112.2 109.4
C10 C9 H9 120.0 120.0
C18 C17 C16 110.9 109.5
C17 C18 H181 109.5 109.5
C17 C18 H182 109.5 109.5
C17 C18 H183 109.5 109.5
C18 C17 H171 109.0 109.5
C18 C17 H172 108.7 109.5
C17 C16 C15 111.0 109.5
C16 C17 H171 109.0 109.4
C16 C17 H172 108.7 109.5
C17 C16 H161 108.9 109.4
C17 C16 H162 108.6 109.5
C16 C15 C14 111.0 109.5
C15 C16 H161 109.0 109.5
C15 C16 H162 108.6 109.5
C16 C15 H151 108.9 109.5
C16 C15 H152 108.6 109.5
C15 C14 C13 109.4 109.5
C14 C15 H151 108.9 109.5
C14 C15 H152 108.6 109.5
C15 C14 H141 109.5 109.4
C15 C14 H142 109.5 109.5
C14 C13 C12 120.0 120.0
C13 C14 H141 109.5 109.4
C13 C14 H142 109.5 109.5
C14 C13 H13 120.0 120.0
C13 C12 C11 120.0 120.0
C12 C13 H13 120.0 120.0
C13 C12 H12 120.0 120.0
C12 C11 H111 109.5 109.5
C12 C11 H112 109.5 109.5
C11 C12 H12 120.0 120.0
C9 C8 C7 120.0 120.0
C8 C9 H9 120.0 120.0
C9 C8 HA 120.0 120.0
C8 C7 C6 109.5 109.5
C7 C8 HA 120.0 120.0
C8 C7 HA1 109.5 109.5
C8 C7 HB2 109.5 109.4
C7 C6 O3 120.1 120.0
C7 C6 C5 119.7 120.0
C6 C7 HA1 109.5 109.5
C6 C7 HB2 109.5 109.4
O3 C6 C5 120.2 120.0
C6 C5 C4 109.4 109.5
C6 C5 HB1 109.5 109.5
C6 C5 HC2 109.5 109.5
C5 C4 C3 110.9 109.5
C4 C5 HB1 109.5 109.5
C4 C5 HC2 109.5 109.4
C5 C4 HC1 109.0 109.5
C5 C4 HD2 108.6 109.5
C4 C3 C2 111.0 109.5
C3 C4 HC1 109.0 109.5
C3 C4 HD2 108.6 109.4
C4 C3 HD1 109.0 109.5
C4 C3 HE2 108.6 109.4
C3 C2 C1 109.5 109.5
C2 C3 HD1 108.9 109.5
C2 C3 HE2 108.7 109.5
C3 C2 HE1 109.5 109.5
C3 C2 HF2 109.4 109.4
C2 C1 O1 118.5 120.0
C2 C1 O2 118.4 120.0
C1 C2 HE1 109.5 109.5
C1 C2 HF2 109.5 109.5
O1 C1 O2 123.0 120.0
C1 O2 HB 109.5 117.1
OXT C10 H10 113.3 109.5
H111 C11 H112 109.5 109.5
H181 C18 H182 109.5 109.4
H181 C18 H183 109.4 109.4
H182 C18 H183 109.5 109.5
H171 C17 H172 110.6 109.5
H161 C16 H162 110.7 109.5
H151 C15 H152 110.7 109.5
H141 C14 H142 109.4 109.5
HA1 C7 HB2 109.5 109.5
HB1 C5 HC2 109.5 109.4
HC1 C4 HD2 110.7 109.4
HD1 C3 HE2 110.7 109.4
HE1 C2 HF2 109.5 109.4

Torsion Angles for 6OB

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C11 C10 C9 C8 169.8 125.0
C9 C10 C11 H10 122.9 120.0
C11 C10 C9 H9 349.8 305.0
C13 C12 C11 C10 103.0 126.3
C12 C11 C10 H111 240.0 240.0
C12 C11 C10 H112 120.0 120.0
C10 C11 C12 H12 283.0 306.4
OXT C10 C11 H10 236.5 239.9
H111 C11 C10 H112 240.0 240.0
C9 C10 C11 C12 68.9 175.0
C11 C10 C9 H10 239.2 240.0
C9 C10 C11 H111 188.9 295.0
C9 C10 C11 H112 308.9 55.0
C10 C9 C8 C7 180.0 180.0
C8 C9 C10 H9 180.0 180.0
C10 C9 C8 HA 0.0 360.0
OXT C10 C9 H10 123.2 120.0
C18 C17 C16 C15 82.0 180.0
C16 C17 C18 H171 240.0 240.1
C16 C17 C18 H172 119.4 120.0
C18 C17 C16 H161 202.0 300.0
C18 C17 C16 H162 322.7 60.0
H181 C18 C17 H182 240.0 240.0
H181 C18 C17 H183 120.0 120.0
H182 C18 C17 H183 240.0 239.9
H171 C17 C18 H172 239.4 239.9
C16 C17 C18 H181 29.5 60.0
C16 C17 C18 H182 149.5 180.0
C16 C17 C18 H183 269.5 300.1
C18 C17 C16 H171 120.0 120.0
C18 C17 C16 H172 240.6 240.0
C17 C16 C15 C14 107.8 180.0
C15 C16 C17 H161 240.0 240.0
C15 C16 C17 H162 119.3 120.0
C17 C16 C15 H151 227.8 300.0
C17 C16 C15 H152 348.5 60.0
H171 C17 C16 H172 120.6 120.0
H161 C16 C17 H162 239.3 240.0
C15 C16 C17 H171 322.0 60.0
C15 C16 C17 H172 201.5 300.0
C17 C16 C15 H161 120.0 119.9
C17 C16 C15 H162 240.6 240.0
C16 C15 C14 C13 154.7 180.0
C14 C15 C16 H151 240.0 240.0
C14 C15 C16 H152 119.4 120.0
C16 C15 C14 H141 274.7 300.0
C16 C15 C14 H142 34.7 60.0
H161 C16 C15 H162 120.7 120.1
H151 C15 C16 H152 239.4 240.0
C14 C15 C16 H161 347.9 60.1
C14 C15 C16 H162 227.2 300.0
C16 C15 C14 H151 120.0 120.0
C16 C15 C14 H152 240.7 240.0
C15 C14 C13 C12 223.0 127.6
C13 C14 C15 H141 240.0 240.1
C13 C14 C15 H142 120.0 120.0
C15 C14 C13 H13 43.0 307.6
H151 C15 C14 H152 120.7 120.0
H141 C14 C15 H142 240.0 240.0
C13 C14 C15 H151 34.7 60.0
C13 C14 C15 H152 274.0 300.0
C15 C14 C13 H141 120.0 119.9
C15 C14 C13 H142 240.0 240.0
C14 C13 C12 C11 360.0 7.5
C12 C13 C14 H13 180.0 180.0
C14 C13 C12 H12 180.0 187.5
H141 C14 C13 H142 120.0 120.1
C10 C11 C12 C13 103.0 126.3
C12 C13 C14 H141 103.0 7.7
C12 C13 C14 H142 343.0 247.6
C14 C13 C12 H13 180.0 180.0
C13 C12 C11 H111 343.0 6.4
C13 C12 C11 H112 223.0 246.3
C11 C12 C13 H12 180.0 180.0
C12 C11 C10 C9 68.9 175.0
C12 C11 C10 H10 305.9 55.1
C10 C11 C12 H111 120.0 120.0
C10 C11 C12 H112 240.0 240.0
C11 C12 C13 H13 180.0 187.5
C13 C12 C11 H12 180.0 180.0
H111 C11 C12 H112 120.0 120.0
C8 C9 C10 H10 290.7 245.0
C10 C9 C8 H9 180.0 180.0
C9 C8 C7 C6 236.4 124.9
C7 C8 C9 HA 180.0 180.0
C9 C8 C7 HA1 356.4 245.0
C9 C8 C7 HB2 116.4 5.0
C7 C8 C9 H9 0.0 0.0
C9 C8 C7 HA 180.0 180.0
C8 C7 C6 O3 295.2 0.1
C8 C7 C6 C5 115.2 180.0
C6 C7 C8 HA1 240.0 239.9
C6 C7 C8 HB2 120.0 119.9
HA1 C7 C8 HB2 240.0 240.0
C6 C7 C8 HA 56.4 305.0
C8 C7 C6 HA1 120.0 120.1
C8 C7 C6 HB2 240.0 240.1
O3 C6 C7 C5 180.0 180.1
C7 C6 C5 C4 143.9 180.0
C7 C6 C5 HB1 263.8 300.1
C7 C6 C5 HC2 23.9 60.1
HA1 C7 C6 HB2 120.0 120.0
C7 C6 O3 C5 180.0 179.9
O3 C6 C7 HA1 175.2 240.0
O3 C6 C7 HB2 55.2 120.0
O3 C6 C5 C4 323.9 360.0
O3 C6 C5 HB1 83.9 120.0
O3 C6 C5 HC2 203.9 240.0
C7 C6 C5 O3 180.0 180.1
C5 C6 C7 HA1 355.2 59.9
C5 C6 C7 HB2 235.2 299.9
C6 C5 C4 C3 222.1 180.0
C4 C5 C6 HB1 240.0 240.0
C4 C5 C6 HC2 120.0 120.0
C6 C5 C4 HC1 342.1 300.1
C6 C5 C4 HD2 102.7 60.0
HB1 C5 C6 HC2 240.0 240.0
C6 C5 C4 HB1 120.0 120.1
C6 C5 C4 HC2 240.0 240.0
C5 C4 C3 C2 306.8 180.0
C3 C4 C5 HC1 240.0 240.0
C3 C4 C5 HD2 119.4 120.0
C5 C4 C3 HD1 66.8 300.1
C5 C4 C3 HE2 187.4 60.0
HB1 C5 C4 HC2 120.0 119.9
HC1 C4 C5 HD2 239.4 240.0
C3 C4 C5 HB1 102.1 60.0
C3 C4 C5 HC2 342.1 300.0
C5 C4 C3 HC1 120.0 120.1
C5 C4 C3 HD2 240.6 240.0
C4 C3 C2 C1 306.7 180.0
C2 C3 C4 HD1 240.0 239.9
C2 C3 C4 HE2 119.4 120.0
C4 C3 C2 HE1 66.8 300.0
C4 C3 C2 HF2 186.8 60.0
HC1 C4 C3 HD2 120.7 119.9
HD1 C3 C4 HE2 239.4 240.1
C2 C3 C4 HC1 186.8 59.9
C2 C3 C4 HD2 66.2 300.0
C4 C3 C2 HD1 120.0 120.0
C4 C3 C2 HE2 240.7 240.0
C3 C2 C1 O1 86.8 0.1
C3 C2 C1 O2 266.8 180.0
C1 C2 C3 HE1 240.0 239.9
C1 C2 C3 HF2 120.0 120.0
HD1 C3 C2 HE2 120.7 120.0
HE1 C2 C3 HF2 240.0 240.1
C1 C2 C3 HD1 186.8 59.9
C1 C2 C3 HE2 66.1 300.0
C3 C2 C1 HE1 120.0 120.0
C3 C2 C1 HF2 240.0 240.0
O1 C1 C2 O2 180.0 180.1
C2 C1 O2 HB 180.0 180.0
HE1 C2 C1 HF2 120.0 120.0
C2 C1 O1 O2 180.0 179.9
O1 C1 C2 HE1 326.8 240.0
O1 C1 C2 HF2 206.7 120.0
O1 C1 O2 HB 0.0 360.0
C2 C1 O2 O1 180.0 180.1
O2 C1 C2 HE1 146.8 60.0
O2 C1 C2 HF2 26.8 300.0
C11 C10 H10 C9 121.3 120.0
H10 C10 C11 C12 305.9 55.1
H10 C10 C11 H111 65.9 175.0
H10 C10 C11 H112 185.9 295.1
H10 C10 C9 C8 290.7 245.0
H10 C10 C9 H9 110.6 65.0
H111 C11 C10 C9 188.9 295.0
C10 C11 H111 C12 240.0 240.0
H111 C11 C10 H10 65.9 175.0
C10 C11 H111 H112 120.0 120.0
C12 C11 H111 H112 240.0 240.0
H111 C11 C12 H12 163.0 186.4
H112 C11 C10 C9 308.9 55.0
C10 C11 H112 C12 120.0 120.0
H112 C11 C10 H10 185.9 295.1
C10 C11 H112 H111 240.0 240.0
C12 C11 H112 H111 120.0 120.0
H112 C11 C12 H12 43.0 66.4
C10 C9 H9 C8 180.0 180.0
H9 C9 C10 H10 110.6 65.0
H9 C9 C8 C7 0.0 0.0
H9 C9 C8 HA 180.1 180.0
H181 C18 C17 C16 29.5 60.0
C17 C18 H181 H182 120.0 120.0
C17 C18 H181 H183 240.0 240.0
H181 C18 C17 H171 149.5 180.0
H181 C18 C17 H172 270.0 300.0
H182 C18 H181 H183 120.0 120.0
H182 C18 C17 C16 149.5 180.0
C17 C18 H182 H181 240.0 240.0
C17 C18 H182 H183 120.0 120.1
H182 C18 C17 H171 269.5 299.9
H182 C18 C17 H172 30.1 60.0
H181 C18 H182 H183 240.0 240.1
H183 C18 C17 C16 269.5 300.1
C17 C18 H183 H181 120.0 120.0
C17 C18 H183 H182 240.0 240.0
H183 C18 C17 H171 29.5 60.0
H183 C18 C17 H172 150.1 180.1
H181 C18 H183 H182 120.0 120.0
C18 C17 H171 C16 238.8 240.0
H171 C17 C18 H181 149.5 180.0
H171 C17 C18 H182 269.5 299.9
H171 C17 C18 H183 29.5 60.0
C18 C17 H171 H172 119.4 120.1
H171 C17 C16 C15 322.0 60.0
C16 C17 H171 H172 240.6 240.0
H171 C17 C16 H161 82.0 180.0
H171 C17 C16 H162 202.7 300.0
C18 C17 H172 C16 120.8 120.0
H172 C17 C18 H181 270.0 300.0
H172 C17 C18 H182 30.1 60.0
H172 C17 C18 H183 150.1 180.1
C18 C17 H172 H171 240.4 240.0
H172 C17 C16 C15 201.5 300.0
C16 C17 H172 H171 119.6 120.0
H172 C17 C16 H161 321.4 60.0
H172 C17 C16 H162 82.1 180.0
C17 C16 H161 C15 238.7 240.0
H161 C16 C17 H171 82.0 180.0
H161 C16 C17 H172 321.4 60.0
C17 C16 H161 H162 119.4 120.0
H161 C16 C15 C14 347.9 60.1
C15 C16 H161 H162 240.7 239.9
H161 C16 C15 H151 107.9 180.0
H161 C16 C15 H152 228.5 300.1
C17 C16 H162 C15 120.9 120.0
H162 C16 C17 H171 202.7 300.0
H162 C16 C17 H172 82.1 180.0
C17 C16 H162 H161 240.4 240.0
H162 C16 C15 C14 227.2 300.0
C15 C16 H162 H161 119.6 120.0
H162 C16 C15 H151 347.2 60.0
H162 C16 C15 H152 107.8 180.0
C16 C15 H151 C14 238.7 240.0
H151 C15 C16 H161 107.9 180.0
H151 C15 C16 H162 347.2 60.0
C16 C15 H151 H152 119.3 120.0
H151 C15 C14 C13 34.7 60.0
C14 C15 H151 H152 240.6 240.0
H151 C15 C14 H141 154.7 180.0
H151 C15 C14 H142 274.7 300.0
C16 C15 H152 C14 120.9 120.0
H152 C15 C16 H161 228.5 300.1
H152 C15 C16 H162 107.8 180.0
C16 C15 H152 H151 240.4 240.0
H152 C15 C14 C13 274.0 300.0
C14 C15 H152 H151 119.6 120.0
H152 C15 C14 H141 34.0 60.0
H152 C15 C14 H142 154.0 180.0
C15 C14 H141 C13 240.0 240.0
H141 C14 C15 H151 154.7 180.0
H141 C14 C15 H152 34.0 60.0
C15 C14 H141 H142 120.0 120.0
H141 C14 C13 C12 103.0 7.7
C13 C14 H141 H142 240.0 240.0
H141 C14 C13 H13 283.0 187.6
C15 C14 H142 C13 120.0 120.0
H142 C14 C15 H151 274.7 300.0
H142 C14 C15 H152 154.0 180.0
C15 C14 H142 H141 240.0 240.0
H142 C14 C13 C12 343.0 247.6
C13 C14 H142 H141 120.0 120.0
H142 C14 C13 H13 163.0 67.6
C14 C13 H13 C12 180.0 180.0
H13 C13 C14 H141 283.0 187.6
H13 C13 C14 H142 163.0 67.6
H13 C13 C12 C11 180.0 187.5
H13 C13 C12 H12 360.0 7.5
C13 C12 H12 C11 180.0 180.0
H12 C12 C13 H13 -0.0 7.5
H12 C12 C11 H111 163.0 186.4
H12 C12 C11 H112 43.0 66.4
C9 C8 HA C7 180.0 180.0
HA C8 C9 H9 180.1 180.0
HA C8 C7 C6 56.4 305.0
HA C8 C7 HA1 176.4 65.0
HA C8 C7 HB2 296.4 185.0
C8 C7 HA1 C6 240.0 239.9
HA1 C7 C8 HA 176.4 65.0
C8 C7 HA1 HB2 120.0 119.9
HA1 C7 C6 O3 175.2 240.0
HA1 C7 C6 C5 355.2 59.9
C6 C7 HA1 HB2 240.0 240.0
C8 C7 HB2 C6 120.0 120.0
HB2 C7 C8 HA 296.4 185.0
C8 C7 HB2 HA1 240.0 240.0
HB2 C7 C6 O3 55.2 120.0
HB2 C7 C6 C5 235.2 299.9
C6 C7 HB2 HA1 120.0 120.0
C6 C5 HB1 C4 240.0 240.0
C6 C5 HB1 HC2 120.0 120.0
HB1 C5 C4 C3 102.1 60.0
C4 C5 HB1 HC2 240.0 240.1
HB1 C5 C4 HC1 222.1 180.0
HB1 C5 C4 HD2 342.8 300.0
C6 C5 HC2 C4 120.0 120.0
C6 C5 HC2 HB1 240.0 240.0
HC2 C5 C4 C3 342.1 300.0
C4 C5 HC2 HB1 120.0 120.0
HC2 C5 C4 HC1 102.1 60.1
HC2 C5 C4 HD2 222.7 180.0
C5 C4 HC1 C3 238.8 239.9
HC1 C4 C5 HB1 222.1 180.0
HC1 C4 C5 HC2 102.1 60.1
C5 C4 HC1 HD2 119.4 120.0
HC1 C4 C3 C2 186.8 59.9
C3 C4 HC1 HD2 240.6 240.1
HC1 C4 C3 HD1 306.8 180.0
HC1 C4 C3 HE2 67.5 299.9
C5 C4 HD2 C3 120.8 120.0
HD2 C4 C5 HB1 342.8 300.0
HD2 C4 C5 HC2 222.7 180.0
C5 C4 HD2 HC1 240.4 240.0
HD2 C4 C3 C2 66.2 300.0
C3 C4 HD2 HC1 119.6 120.0
HD2 C4 C3 HD1 186.2 60.1
HD2 C4 C3 HE2 306.8 180.0
C4 C3 HD1 C2 238.8 239.9
HD1 C3 C4 HC1 306.8 180.0
HD1 C3 C4 HD2 186.2 60.1
C4 C3 HD1 HE2 119.3 119.9
HD1 C3 C2 C1 186.8 59.9
C2 C3 HD1 HE2 240.6 240.0
HD1 C3 C2 HE1 306.8 180.0
HD1 C3 C2 HF2 66.8 299.9
C4 C3 HE2 C2 120.9 120.0
HE2 C3 C4 HC1 67.5 299.9
HE2 C3 C4 HD2 306.8 180.0
C4 C3 HE2 HD1 240.4 240.0
HE2 C3 C2 C1 66.1 300.0
C2 C3 HE2 HD1 119.6 120.0
HE2 C3 C2 HE1 186.1 60.0
HE2 C3 C2 HF2 306.1 180.0
C3 C2 HE1 C1 240.0 240.0
HE1 C2 C3 HD1 306.8 180.0
HE1 C2 C3 HE2 186.1 60.0
C3 C2 HE1 HF2 120.0 119.9
HE1 C2 C1 O1 326.8 240.0
HE1 C2 C1 O2 146.8 60.0
C1 C2 HE1 HF2 240.0 240.0
C3 C2 HF2 C1 120.0 120.0
HF2 C2 C3 HD1 66.8 299.9
HF2 C2 C3 HE2 306.1 180.0
C3 C2 HF2 HE1 240.0 240.0
HF2 C2 C1 O1 206.7 120.0
HF2 C2 C1 O2 26.8 300.0
C1 C2 HF2 HE1 120.0 120.0
HOT OXT C10 H10 248.8 180.0
C11 C10 OXT H10 120.7 120.1
OXT C10 C11 H111 302.4 54.9
OXT C10 C11 H112 62.4 175.0
C9 C10 OXT H10 237.5 240.0
OXT C10 C9 H9 233.9 185.0