PDB Chemical Component 6NA
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6NA
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CA |
C |
1.511 |
1.507 |
| CA |
CB |
1.526 |
1.531 |
| CA |
HAC1 |
1.100 |
1.090 |
| CA |
HAC2 |
1.100 |
1.090 |
| C |
O |
1.216 |
1.208 |
| C |
OXT |
1.717 |
1.342 |
| CB |
CG |
1.527 |
1.530 |
| CB |
HBC1 |
1.099 |
1.090 |
| CB |
HBC2 |
1.100 |
1.090 |
| CG |
CD |
1.519 |
1.530 |
| CG |
HGC1 |
1.100 |
1.090 |
| CG |
HGC2 |
1.100 |
1.090 |
| CD |
C6 |
1.513 |
1.530 |
| CD |
HDC1 |
1.100 |
1.090 |
| CD |
HDC2 |
1.100 |
1.090 |
| C6 |
H6C1 |
1.101 |
1.090 |
| C6 |
H6C2 |
1.100 |
1.090 |
| C6 |
H6C3 |
1.100 |
1.089 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for 6NA
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C |
CA |
CB |
111.1 |
109.5 |
| C |
CA |
HAC1 |
108.5 |
109.5 |
| C |
CA |
HAC2 |
108.9 |
109.5 |
| CA |
C |
O |
118.3 |
120.0 |
| CA |
C |
OXT |
119.7 |
120.0 |
| CB |
CA |
HAC1 |
108.6 |
109.5 |
| CB |
CA |
HAC2 |
108.9 |
109.5 |
| CA |
CB |
CG |
111.2 |
109.5 |
| CA |
CB |
HBC1 |
108.5 |
109.5 |
| CA |
CB |
HBC2 |
108.9 |
109.5 |
| HAC1 |
CA |
HAC2 |
110.8 |
109.5 |
| O |
C |
OXT |
122.0 |
120.0 |
| C |
OXT |
HXT |
109.5 |
120.0 |
| CG |
CB |
HBC1 |
108.5 |
109.5 |
| CG |
CB |
HBC2 |
108.9 |
109.5 |
| CB |
CG |
CD |
114.1 |
109.5 |
| CB |
CG |
HGC1 |
106.9 |
109.5 |
| CB |
CG |
HGC2 |
108.0 |
109.5 |
| HBC1 |
CB |
HBC2 |
110.8 |
109.5 |
| CD |
CG |
HGC1 |
106.9 |
109.5 |
| CD |
CG |
HGC2 |
107.9 |
109.5 |
| CG |
CD |
C6 |
108.3 |
109.5 |
| CG |
CD |
HDC1 |
110.1 |
109.5 |
| CG |
CD |
HDC2 |
109.9 |
109.5 |
| HGC1 |
CG |
HGC2 |
113.2 |
109.5 |
| C6 |
CD |
HDC1 |
110.1 |
109.5 |
| C6 |
CD |
HDC2 |
109.9 |
109.5 |
| CD |
C6 |
H6C1 |
109.4 |
109.4 |
| CD |
C6 |
H6C2 |
109.5 |
109.4 |
| CD |
C6 |
H6C3 |
109.5 |
109.5 |
| HDC1 |
CD |
HDC2 |
108.6 |
109.5 |
| H6C1 |
C6 |
H6C2 |
109.5 |
109.5 |
| H6C1 |
C6 |
H6C3 |
109.5 |
109.5 |
| H6C2 |
C6 |
H6C3 |
109.5 |
109.5 |
Torsion Angles for 6NA
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CB |
CA |
C |
HAC1 |
119.3 |
120.0 |
| CB |
CA |
C |
HAC2 |
240.0 |
240.0 |
| C |
CA |
CB |
CG |
310.5 |
180.0 |
| C |
CA |
CB |
HBC1 |
191.2 |
60.0 |
| C |
CA |
CB |
HBC2 |
70.4 |
300.0 |
| HAC1 |
CA |
C |
HAC2 |
120.7 |
120.0 |
| O |
C |
CA |
OXT |
180.0 |
180.0 |
| CA |
C |
OXT |
HXT |
180.1 |
180.0 |
| C |
CA |
CB |
HAC1 |
240.7 |
240.0 |
| C |
CA |
CB |
HAC2 |
120.0 |
120.0 |
| CB |
CA |
C |
O |
291.0 |
-0.0 |
| CB |
CA |
C |
OXT |
111.0 |
180.0 |
| HAC1 |
CA |
CB |
HAC2 |
239.3 |
240.0 |
| CG |
CB |
CA |
HBC1 |
119.3 |
120.0 |
| CG |
CB |
CA |
HBC2 |
240.0 |
240.0 |
| CA |
CB |
CG |
CD |
263.3 |
180.0 |
| CA |
CB |
CG |
HGC1 |
145.3 |
60.0 |
| CA |
CB |
CG |
HGC2 |
23.3 |
300.0 |
| HBC1 |
CB |
CA |
HBC2 |
120.7 |
120.0 |
| C |
CA |
HAC1 |
CB |
120.9 |
120.0 |
| C |
CA |
HAC1 |
HAC2 |
240.5 |
240.0 |
| HAC1 |
CA |
C |
O |
171.7 |
240.0 |
| HAC1 |
CA |
C |
OXT |
351.6 |
60.0 |
| CB |
CA |
HAC1 |
HAC2 |
119.6 |
120.0 |
| HAC1 |
CA |
CB |
CG |
69.8 |
300.0 |
| HAC1 |
CA |
CB |
HBC1 |
310.5 |
180.0 |
| HAC1 |
CA |
CB |
HBC2 |
189.7 |
60.0 |
| C |
CA |
HAC2 |
CB |
238.6 |
240.0 |
| C |
CA |
HAC2 |
HAC1 |
119.3 |
120.0 |
| HAC2 |
CA |
C |
O |
51.0 |
120.0 |
| HAC2 |
CA |
C |
OXT |
231.0 |
300.0 |
| CB |
CA |
HAC2 |
HAC1 |
240.7 |
240.0 |
| HAC2 |
CA |
CB |
CG |
190.5 |
60.0 |
| HAC2 |
CA |
CB |
HBC1 |
71.2 |
300.0 |
| HAC2 |
CA |
CB |
HBC2 |
310.4 |
180.0 |
| O |
C |
CA |
CB |
291.0 |
-0.0 |
| O |
C |
CA |
HAC1 |
171.7 |
240.0 |
| O |
C |
CA |
HAC2 |
51.0 |
120.0 |
| CA |
C |
O |
OXT |
180.0 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
-0.0 |
| OXT |
C |
CA |
CB |
111.0 |
180.0 |
| OXT |
C |
CA |
HAC1 |
351.6 |
60.0 |
| OXT |
C |
CA |
HAC2 |
231.0 |
300.0 |
| CA |
C |
OXT |
O |
180.0 |
180.0 |
| CG |
CB |
CA |
HAC1 |
69.8 |
300.0 |
| CG |
CB |
CA |
HAC2 |
190.5 |
60.0 |
| CA |
CB |
CG |
HBC1 |
240.7 |
240.0 |
| CA |
CB |
CG |
HBC2 |
120.0 |
120.0 |
| HBC1 |
CB |
CG |
HBC2 |
239.3 |
240.0 |
| CD |
CG |
CB |
HGC1 |
118.0 |
120.0 |
| CD |
CG |
CB |
HGC2 |
240.0 |
240.0 |
| CB |
CG |
CD |
C6 |
184.1 |
180.0 |
| CB |
CG |
CD |
HDC1 |
63.6 |
60.0 |
| CB |
CG |
CD |
HDC2 |
304.1 |
300.0 |
| HGC1 |
CG |
CB |
HGC2 |
122.0 |
120.0 |
| HBC1 |
CB |
CA |
HAC1 |
310.5 |
180.0 |
| HBC1 |
CB |
CA |
HAC2 |
71.2 |
300.0 |
| CA |
CB |
HBC1 |
CG |
120.9 |
120.0 |
| CA |
CB |
HBC1 |
HBC2 |
240.5 |
240.0 |
| CG |
CB |
HBC1 |
HBC2 |
119.5 |
120.0 |
| HBC1 |
CB |
CG |
CD |
22.6 |
300.0 |
| HBC1 |
CB |
CG |
HGC1 |
264.6 |
180.0 |
| HBC1 |
CB |
CG |
HGC2 |
142.6 |
60.0 |
| HBC2 |
CB |
CA |
HAC1 |
189.7 |
60.0 |
| HBC2 |
CB |
CA |
HAC2 |
310.4 |
180.0 |
| CA |
CB |
HBC2 |
CG |
238.6 |
240.0 |
| CA |
CB |
HBC2 |
HBC1 |
119.3 |
120.0 |
| CG |
CB |
HBC2 |
HBC1 |
240.7 |
240.0 |
| HBC2 |
CB |
CG |
CD |
143.3 |
60.0 |
| HBC2 |
CB |
CG |
HGC1 |
25.4 |
300.0 |
| HBC2 |
CB |
CG |
HGC2 |
263.3 |
180.0 |
| CD |
CG |
CB |
HBC1 |
22.6 |
300.0 |
| CD |
CG |
CB |
HBC2 |
143.3 |
60.0 |
| CB |
CG |
CD |
HGC1 |
242.1 |
240.0 |
| CB |
CG |
CD |
HGC2 |
120.0 |
120.0 |
| HGC1 |
CG |
CD |
HGC2 |
237.9 |
240.0 |
| C6 |
CD |
CG |
HDC1 |
120.5 |
120.0 |
| C6 |
CD |
CG |
HDC2 |
240.0 |
240.0 |
| CG |
CD |
C6 |
H6C1 |
354.8 |
300.0 |
| CG |
CD |
C6 |
H6C2 |
234.8 |
60.0 |
| CG |
CD |
C6 |
H6C3 |
114.8 |
180.0 |
| HDC1 |
CD |
CG |
HDC2 |
119.5 |
120.0 |
| HGC1 |
CG |
CB |
HBC1 |
264.6 |
180.0 |
| HGC1 |
CG |
CB |
HBC2 |
25.4 |
300.0 |
| CB |
CG |
HGC1 |
CD |
122.6 |
120.0 |
| CB |
CG |
HGC1 |
HGC2 |
241.3 |
240.0 |
| CD |
CG |
HGC1 |
HGC2 |
118.7 |
120.0 |
| HGC1 |
CG |
CD |
C6 |
302.0 |
300.0 |
| HGC1 |
CG |
CD |
HDC1 |
181.5 |
180.0 |
| HGC1 |
CG |
CD |
HDC2 |
62.0 |
60.0 |
| HGC2 |
CG |
CB |
HBC1 |
142.6 |
60.0 |
| HGC2 |
CG |
CB |
HBC2 |
263.3 |
180.0 |
| CB |
CG |
HGC2 |
CD |
236.2 |
240.0 |
| CB |
CG |
HGC2 |
HGC1 |
118.1 |
120.0 |
| CD |
CG |
HGC2 |
HGC1 |
241.9 |
240.0 |
| HGC2 |
CG |
CD |
C6 |
64.1 |
60.0 |
| HGC2 |
CG |
CD |
HDC1 |
303.6 |
300.0 |
| HGC2 |
CG |
CD |
HDC2 |
184.1 |
180.0 |
| C6 |
CD |
CG |
HGC1 |
302.0 |
300.0 |
| C6 |
CD |
CG |
HGC2 |
64.1 |
60.0 |
| CG |
CD |
C6 |
HDC1 |
239.5 |
240.0 |
| CG |
CD |
C6 |
HDC2 |
120.0 |
120.0 |
| HDC1 |
CD |
C6 |
HDC2 |
240.5 |
240.0 |
| H6C1 |
C6 |
CD |
H6C2 |
120.0 |
240.0 |
| H6C1 |
C6 |
CD |
H6C3 |
240.0 |
120.0 |
| H6C2 |
C6 |
CD |
H6C3 |
120.0 |
240.0 |
| HDC1 |
CD |
CG |
HGC1 |
181.5 |
180.0 |
| HDC1 |
CD |
CG |
HGC2 |
303.6 |
300.0 |
| CG |
CD |
HDC1 |
C6 |
119.4 |
120.0 |
| CG |
CD |
HDC1 |
HDC2 |
239.7 |
240.0 |
| C6 |
CD |
HDC1 |
HDC2 |
120.3 |
120.0 |
| HDC1 |
CD |
C6 |
H6C1 |
115.3 |
60.0 |
| HDC1 |
CD |
C6 |
H6C2 |
355.2 |
180.0 |
| HDC1 |
CD |
C6 |
H6C3 |
235.3 |
300.0 |
| HDC2 |
CD |
CG |
HGC1 |
62.0 |
60.0 |
| HDC2 |
CD |
CG |
HGC2 |
184.1 |
180.0 |
| CG |
CD |
HDC2 |
C6 |
241.0 |
240.0 |
| CG |
CD |
HDC2 |
HDC1 |
120.5 |
120.0 |
| C6 |
CD |
HDC2 |
HDC1 |
239.5 |
240.0 |
| HDC2 |
CD |
C6 |
H6C1 |
234.8 |
180.0 |
| HDC2 |
CD |
C6 |
H6C2 |
114.8 |
300.0 |
| HDC2 |
CD |
C6 |
H6C3 |
354.8 |
60.0 |
| H6C1 |
C6 |
CD |
HDC1 |
115.3 |
60.0 |
| H6C1 |
C6 |
CD |
HDC2 |
234.8 |
180.0 |
| CD |
C6 |
H6C1 |
H6C2 |
240.0 |
119.9 |
| CD |
C6 |
H6C1 |
H6C3 |
120.0 |
240.0 |
| H6C2 |
C6 |
H6C1 |
H6C3 |
240.0 |
120.1 |
| H6C2 |
C6 |
CD |
HDC1 |
355.2 |
180.0 |
| H6C2 |
C6 |
CD |
HDC2 |
114.8 |
300.0 |
| CD |
C6 |
H6C2 |
H6C1 |
120.0 |
240.1 |
| CD |
C6 |
H6C2 |
H6C3 |
240.0 |
120.0 |
| H6C1 |
C6 |
H6C2 |
H6C3 |
120.0 |
239.9 |
| H6C3 |
C6 |
CD |
HDC1 |
235.3 |
300.0 |
| H6C3 |
C6 |
CD |
HDC2 |
354.8 |
60.0 |
| CD |
C6 |
H6C3 |
H6C1 |
240.0 |
120.0 |
| CD |
C6 |
H6C3 |
H6C2 |
120.0 |
240.0 |
| H6C1 |
C6 |
H6C3 |
H6C2 |
240.0 |
120.1 |