PDB Chemical Component 6LI

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 6LI

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	N1	1.509	1.465
C1	O1	1.473	1.444
C1	C4	1.537	1.544
N1	C7	1.322	1.369
N1	C8	1.341	1.364
O1	C2	1.459	1.444
P1	O4	1.623	1.611
P1	O7	1.512	1.480
P1	O8	1.631	1.610
P1	O9	1.642	1.610
CL1	C16	1.723	1.736
C2	C3	1.534	1.545
C2	C5	1.515	1.531
N2	C6	1.334	1.355
N2	C8	1.327	1.301
N2	C11	1.488	1.466
O2	C4	1.441	1.429
C3	O3	1.437	1.429
C3	C4	1.506	1.545
N3	C9	1.416	1.363
N3	C10	1.410	1.351
N4	C7	1.347	1.338
N4	C9	1.363	1.315
O4	C5	1.394	1.429
N5	C9	1.335	1.373
O5	C10	1.233	1.220
C6	C7	1.388	1.399
C6	C10	1.396	1.415
O6	C12	1.437	1.428
O6	C13	1.374	1.359
C11	C12	1.511	1.529
C13	C14	1.400	1.387
C13	C18	1.391	1.388
C14	C15	1.386	1.382
C15	C16	1.392	1.384
C16	C17	1.370	1.384
C17	C18	1.369	1.381
C1	H1	1.100	1.090
C2	H2	1.100	1.090
O2	HO2	0.950	0.967
C3	H3	1.100	1.090
N3	HN3	1.000	0.969
O3	HO3	0.950	0.968
C4	H4	1.100	1.090
C5	H5	1.100	1.090
C5	H5A	1.100	1.089
N5	HN5	1.000	0.970
N5	HN5A	1.000	0.970
C8	H8	1.080	1.080
C11	H11	1.100	1.090
C11	H11A	1.100	1.090
C12	H12	1.100	1.090
C12	H12A	1.100	1.090
C14	H14	1.080	1.080
C15	H15	1.081	1.080
C17	H17	1.080	1.079
C18	H18	1.080	1.080
O8	HO8	0.951	0.967
O9	HO9	0.950	0.967

Bond Angles for 6LI

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
N1	C1	O1	110.1	110.4
N1	C1	C4	109.1	110.4
C1	N1	C7	124.0	126.2
C1	N1	C8	126.7	126.3
N1	C1	H1	110.7	110.4
O1	C1	C4	105.2	104.8
C1	O1	C2	107.3	105.3
O1	C1	H1	111.3	110.4
C1	C4	O2	110.0	110.6
C1	C4	C3	101.1	104.1
C4	C1	H1	110.3	110.4
C1	C4	H4	111.3	110.5
C7	N1	C8	109.3	107.5
N1	C7	N4	131.2	134.2
N1	C7	C6	106.7	106.1
N1	C8	N2	108.0	109.8
N1	C8	H8	126.0	125.1
O1	C2	C3	100.7	104.8
O1	C2	C5	108.4	110.4
O1	C2	H2	112.5	110.4
O4	P1	O7	107.9	109.4
O4	P1	O8	105.2	109.4
O4	P1	O9	104.9	109.4
P1	O4	C5	123.7	123.0
O7	P1	O8	119.0	109.5
O7	P1	O9	116.2	109.5
O8	P1	O9	102.2	109.5
P1	O8	HO8	109.5	114.0
P1	O9	HO9	109.5	114.0
CL1	C16	C15	121.0	120.0
CL1	C16	C17	117.3	119.9
C3	C2	C5	111.7	110.3
C2	C3	O3	109.7	110.5
C2	C3	C4	99.1	104.0
C3	C2	H2	111.3	110.4
C2	C3	H3	111.3	110.6
C2	C5	O4	105.3	109.4
C5	C2	H2	111.7	110.4
C2	C5	H5	110.5	109.5
C2	C5	H5A	110.5	109.5
C6	N2	C8	109.0	109.3
C6	N2	C11	126.8	125.3
N2	C6	C7	107.0	107.3
N2	C6	C10	133.6	134.2
C8	N2	C11	124.0	125.4
N2	C8	H8	126.0	125.1
N2	C11	C12	114.3	109.5
N2	C11	H11	108.2	109.5
N2	C11	H11A	108.3	109.5
O2	C4	C3	109.3	110.5
C4	O2	HO2	109.5	114.0
O2	C4	H4	112.8	110.4
O3	C3	C4	111.3	110.5
O3	C3	H3	112.9	110.5
C3	O3	HO3	109.5	114.0
C4	C3	H3	111.7	110.7
C3	C4	H4	111.8	110.6
C9	N3	C10	117.7	120.3
N3	C9	N4	121.8	121.9
N3	C9	N5	118.8	119.1
C9	N3	HN3	121.2	119.8
N3	C10	O5	121.0	120.8
N3	C10	C6	119.5	118.4
C10	N3	HN3	121.1	119.9
C7	N4	C9	119.5	121.1
N4	C7	C6	122.1	119.8
N4	C9	N5	119.4	119.0
O4	C5	H5	110.5	109.5
O4	C5	H5A	110.5	109.5
C9	N5	HN5	120.0	120.0
C9	N5	HN5A	120.0	120.0
O5	C10	C6	119.5	120.8
C7	C6	C10	119.4	118.5
C12	O6	C13	115.6	117.0
O6	C12	C11	106.0	109.5
O6	C12	H12	110.3	109.5
O6	C12	H12A	110.3	109.5
O6	C13	C14	123.3	120.1
O6	C13	C18	117.1	120.0
C12	C11	H11	108.3	109.5
C12	C11	H11A	108.2	109.5
C11	C12	H12	110.3	109.4
C11	C12	H12A	110.3	109.5
C14	C13	C18	119.6	119.9
C13	C14	C15	119.5	120.0
C13	C14	H14	120.2	120.0
C13	C18	C17	120.9	120.0
C13	C18	H18	119.5	120.0
C14	C15	C16	119.1	120.0
C15	C14	H14	120.2	120.0
C14	C15	H15	120.5	120.0
C15	C16	C17	121.7	120.1
C16	C15	H15	120.4	120.0
C16	C17	C18	119.2	120.0
C16	C17	H17	120.4	120.0
C18	C17	H17	120.4	120.0
C17	C18	H18	119.5	120.1
H5	C5	H5A	109.5	109.5
HN5	N5	HN5A	120.0	120.0
H11	C11	H11A	109.5	109.4
H12	C12	H12A	109.5	109.5

Torsion Angles for 6LI

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	N1	C4	114.9	115.4
N1	C1	O1	C2	236.7	200.7
O1	C1	N1	H1	236.5	237.7
N1	C1	C4	O2	207.7	261.5
N1	C1	C4	C3	92.3	142.8
C4	C1	N1	H1	121.6	122.3
N1	C1	C4	H4	333.5	24.0
C7	N1	C1	C8	178.6	180.3
C1	N1	C7	N4	1.7	359.9
C1	N1	C7	C6	181.5	180.0
C1	N1	C8	N2	179.9	180.0
C1	N1	C8	H8	359.9	0.0
N1	C1	O1	C4	242.6	241.2
O1	C1	N1	C7	193.0	203.6
O1	C1	N1	C8	14.4	23.2
N1	C1	O1	H1	123.1	122.3
O1	C1	C4	O2	89.6	142.6
O1	C1	C4	C3	334.2	23.9
C4	C1	O1	H1	240.6	241.1
O1	C1	C4	H4	215.4	265.1
C1	O1	C2	C3	34.7	40.5
C1	O1	C2	C5	152.1	159.3
C1	O1	C2	H2	276.1	281.7
N1	C1	C4	O1	118.1	118.9
C4	C1	N1	C7	78.1	88.2
C4	C1	N1	C8	259.5	267.9
N1	C1	C4	H1	238.1	237.7
C4	C1	O1	C2	354.1	319.5
O1	C1	C4	H1	120.1	118.9
C2	C3	C4	C1	45.9	0.0
O2	C4	C1	C3	115.4	118.7
C1	C4	O2	HO2	180.0	180.0
O2	C4	C1	H4	234.3	237.5
O3	C3	C4	C1	161.3	118.6
C1	C4	C3	H3	288.5	241.3
C3	C4	C1	H4	118.8	118.8
C7	N1	C1	O1	193.0	203.6
C7	N1	C1	C4	78.1	88.2
C1	N1	C7	C8	181.2	179.7
C7	N1	C1	H1	316.5	325.9
C7	N1	C8	N2	1.1	359.8
C7	N1	C8	H8	181.1	179.7
N2	C6	C7	N1	358.5	359.8
N1	C7	N4	C9	179.7	180.1
N4	C7	N1	C6	180.2	179.9
N1	C7	C6	C10	181.1	179.8
C8	N1	C1	O1	14.4	23.2
C8	N1	C1	C4	259.5	267.9
C1	N1	C8	C7	178.8	180.3
C8	N1	C1	H1	137.9	145.5
C8	N1	C7	N4	180.5	180.2
C8	N1	C7	C6	0.3	0.3
C6	N2	C8	N1	358.0	0.1
N1	C8	N2	C11	182.6	180.2
N2	C8	N1	H8	180.0	180.0
C2	O1	C1	C4	354.1	319.5
C2	O1	C1	H1	113.5	78.4
C3	C2	O1	C5	242.6	241.2
O1	C2	C3	O3	193.2	217.4
O1	C2	C3	C4	309.8	336.0
C3	C2	O1	H2	118.6	118.9
O1	C2	C3	H3	67.5	94.8
O1	C2	C5	O4	310.4	66.5
C5	C2	O1	H2	236.0	237.6
O1	C2	C5	H5	69.8	186.5
O1	C2	C5	H5A	191.1	306.5
O7	P1	O4	O8	128.0	240.0
O7	P1	O4	O9	235.5	120.0
O8	P1	O4	O9	107.4	240.0
O4	P1	O8	HO8	121.0	180.0
O4	P1	O9	HO9	240.9	299.9
C2	C5	O4	P1	185.2	180.0
P1	O4	C5	H5	65.9	60.0
P1	O4	C5	H5A	304.5	300.0
O4	P1	O7	O8	240.3	120.0
O4	P1	O7	O9	117.4	240.0
O7	P1	O4	C5	30.2	55.0
O8	P1	O7	O9	237.1	120.1
O7	P1	O8	HO8	0.0	300.0
O7	P1	O9	HO9	0.0	180.0
O4	P1	O8	O7	121.0	240.0
O4	P1	O8	O9	250.6	120.0
O8	P1	O4	C5	262.2	175.0
O7	P1	O8	O9	129.6	240.0
O8	P1	O9	HO9	131.3	59.9
O4	P1	O9	O7	240.9	120.0
O4	P1	O9	O8	109.6	240.0
O9	P1	O4	C5	154.8	295.0
O7	P1	O9	O8	228.7	120.1
O9	P1	O8	HO8	230.4	60.0
C14	C15	C16	CL1	178.8	179.9
C15	C16	CL1	C17	182.6	180.1
CL1	C16	C15	H15	358.7	360.0
CL1	C16	C17	C18	180.9	179.8
CL1	C16	C17	H17	0.9	0.1
C1	C4	C3	C2	45.9	0.0
O1	C2	C3	C5	114.9	118.8
O1	C2	C3	H2	240.5	241.1
C3	C2	C5	O4	60.5	181.8
C5	C2	C3	H2	125.6	122.3
C3	C2	C5	H5	179.9	301.8
C3	C2	C5	H5A	301.2	61.9
O2	C4	C3	C2	289.9	241.3
O3	C3	C2	C4	243.3	241.4
O3	C3	C2	H3	125.6	122.6
C2	C3	O3	HO3	180.0	180.0
C4	C3	C2	H3	242.3	241.2
C2	C3	C4	H4	164.4	118.7
O1	C2	C5	C3	249.9	244.6
O1	C2	C5	H2	124.5	122.4
P1	O4	C5	C2	185.2	180.0
C5	C2	C3	O3	78.3	98.6
C5	C2	C3	C4	194.9	217.2
C3	C2	C5	H2	234.6	237.7
C5	C2	C3	H3	312.6	336.0
O4	C5	C2	H5	240.6	240.0
O4	C5	C2	H5A	119.3	120.0
H5	C5	C2	H5A	238.7	240.0
N1	C7	C6	N2	358.5	359.8
N1	C8	N2	C6	358.0	0.1
C8	N2	C6	C11	184.8	180.1
C6	N2	C8	H8	177.9	180.1
C6	N2	C11	C12	86.7	85.0
C6	N2	C11	H11	207.5	205.0
C6	N2	C11	H11A	326.1	325.0
N3	C10	C6	N2	182.6	180.3
N4	C7	C6	N2	178.3	179.9
O5	C10	C6	N2	2.2	0.1
C7	C6	N2	C10	183.2	180.1
N1	C8	N2	H8	180.0	180.0
C6	N2	C8	C11	175.3	179.9
C8	N2	C6	C7	2.2	0.1
C8	N2	C6	C10	179.0	180.0
C8	N2	C11	C12	261.2	264.9
C8	N2	C11	H11	21.9	24.9
C8	N2	C11	H11A	140.5	144.9
C6	N2	C11	C8	185.5	180.1
C11	N2	C6	C7	177.4	180.0
C11	N2	C6	C10	354.2	359.9
C11	N2	C8	H8	2.6	0.2
O6	C12	C11	N2	80.4	180.0
C12	C11	N2	H11	239.3	240.0
C12	C11	N2	H11A	120.7	120.0
N2	C11	C12	H12	321.0	60.0
N2	C11	C12	H12A	199.8	300.0
H11	C11	N2	H11A	241.4	240.1
C1	C4	O2	C3	249.8	245.3
O2	C4	C1	H1	329.6	23.8
C1	C4	O2	H4	124.9	122.5
C2	C3	C4	O2	289.9	241.3
O3	C3	C4	O2	45.3	359.9
O2	C4	C3	H3	172.5	122.6
C3	C4	O2	H4	235.0	237.3
C1	C4	C3	O3	161.3	118.6
O3	C3	C2	C5	78.3	98.6
C2	C3	O3	C4	108.7	114.6
O3	C3	C2	H2	312.7	336.3
C2	C3	O3	H3	235.3	237.4
O2	C4	C3	O3	45.3	359.9
C4	C3	O3	H3	126.5	122.8
O3	C3	C4	H4	279.8	237.3
C1	C4	C3	O2	116.0	118.7
C3	C4	C1	H1	214.1	265.1
C1	C4	C3	H4	241.5	241.3
C4	C3	C2	C5	194.9	217.2
C2	C3	C4	O3	244.6	241.4
C4	C3	C2	H2	69.3	94.9
C2	C3	C4	H3	117.4	118.7
C3	C4	O2	HO2	290.2	294.7
O2	C4	C3	H4	125.5	122.6
O3	C3	C4	H3	232.8	237.3
C4	C3	O3	HO3	71.3	65.4
C9	N3	C10	O5	180.5	180.0
C9	N3	C10	C6	0.1	359.7
C10	N3	C9	HN3	180.0	180.1
C7	N4	C9	N3	359.3	360.0
N4	C9	N3	N5	179.9	180.2
N3	C9	N5	HN5	179.9	360.0
N3	C9	N5	HN5A	359.9	180.1
N2	C6	C10	N3	182.6	180.3
C10	N3	C9	N4	0.7	0.2
C10	N3	C9	N5	180.7	180.0
C9	N3	C10	HN3	180.0	179.9
O5	C10	N3	C6	180.4	180.2
C7	C6	C10	N3	359.1	0.2
N4	C7	N1	C8	180.5	180.2
N1	C7	N4	C6	179.8	180.1
N2	C6	C7	N4	178.3	179.9
N3	C9	N4	C7	359.3	360.0
C7	N4	C9	N5	179.2	180.2
N4	C7	C6	C10	0.9	359.9
N4	C9	N3	C10	0.7	0.2
N3	C9	N4	N5	180.1	179.8
N4	C9	N3	HN3	180.6	180.0
C9	N4	C7	C6	359.9	360.0
N4	C9	N5	HN5	0.0	179.8
N4	C9	N5	HN5A	180.0	359.9
C5	O4	P1	O7	30.2	55.0
C5	O4	P1	O8	262.2	175.0
C5	O4	P1	O9	154.8	295.0
O4	C5	C2	H2	185.9	304.1
C2	C5	O4	H5	119.4	120.0
C2	C5	O4	H5A	240.7	240.0
H5	C5	O4	H5A	121.3	120.0
N5	C9	N3	C10	180.7	180.0
N3	C9	N5	N4	179.9	180.2
N5	C9	N3	HN3	0.7	359.9
HN5	N5	C9	HN5A	180.0	179.9
N2	C6	C10	O5	2.2	0.1
N3	C10	O5	C6	179.6	179.8
O5	C10	N3	HN3	0.6	0.1
C7	C6	C10	O5	178.7	180.0
C6	C7	N1	C8	0.3	0.3
N1	C7	C6	N4	180.2	179.9
C7	C6	N2	C8	2.2	0.1
C7	C6	N2	C11	177.4	180.0
N2	C6	C7	C10	177.4	179.9
N3	C10	C6	C7	359.1	0.2
C6	C7	N4	C9	359.9	360.0
O5	C10	C6	C7	178.7	180.0
C10	C6	N2	C8	179.0	180.0
C10	C6	N2	C11	354.2	359.9
N2	C6	C10	C7	183.5	180.1
N3	C10	C6	O5	180.4	180.2
C6	C10	N3	HN3	180.2	179.9
N2	C11	C12	O6	80.4	180.0
C12	O6	C13	C14	351.2	180.0
C12	O6	C13	C18	171.2	359.8
O6	C12	C11	H11	319.7	59.9
O6	C12	C11	H11A	201.1	300.0
C11	C12	O6	H12	240.5	240.0
C11	C12	O6	H12A	119.4	120.0
H12	C12	O6	H12A	238.9	240.0
C13	O6	C12	C11	181.6	180.0
C13	O6	C12	H12	301.1	299.9
C13	O6	C12	H12A	62.2	60.0
C14	C13	O6	C18	180.0	180.2
O6	C13	C14	C15	179.6	180.0
O6	C13	C14	H14	359.6	0.0
O6	C13	C18	C17	180.2	179.7
O6	C13	C18	H18	0.2	360.0
N2	C11	C12	H11	120.7	120.0
N2	C11	C12	H11A	239.3	240.0
C11	C12	O6	C13	181.6	180.0
O6	C12	C11	H12	119.5	120.0
O6	C12	C11	H12A	240.6	240.0
H11	C11	C12	H11A	118.6	120.0
H12	C12	C11	H12A	121.1	120.0
O6	C13	C14	C18	180.0	179.8
C14	C13	C18	C17	0.2	359.6
C14	C13	C18	H18	180.1	179.8
C13	C14	C15	C16	359.6	0.0
C15	C14	C13	H14	180.0	180.0
C13	C14	C15	H15	179.6	180.0
O6	C13	C18	C14	180.0	180.2
C18	C13	C14	C15	359.6	0.2
C18	C13	C14	H14	179.6	180.2
C16	C17	C18	C13	0.8	0.5
C13	C18	C17	H17	180.9	180.2
C17	C18	C13	H18	180.0	179.8
CL1	C16	C15	C14	178.8	179.9
C15	C14	C13	C18	359.6	0.2
C13	C14	C15	H14	180.0	180.0
C14	C15	C16	C17	1.5	0.0
C16	C15	C14	H15	180.0	180.0
CL1	C16	C15	C17	177.3	179.9
C16	C15	C14	H14	179.6	180.0
C14	C15	C16	H15	180.0	180.0
C15	C16	C17	C18	358.3	359.7
C15	C16	C17	H17	178.3	180.0
CL1	C16	C17	C15	182.6	180.1
C13	C18	C17	C16	0.8	0.5
C17	C16	C15	H15	181.5	180.0
C18	C17	C16	H17	180.0	179.7
C16	C17	C18	H18	180.9	180.3
C13	C18	C17	H18	180.0	180.2
C16	C17	C18	H17	180.0	180.3
N1	C1	H1	O1	237.2	237.7
N1	C1	H1	C4	120.9	122.3
H1	C1	N1	C7	316.5	325.9
H1	C1	N1	C8	137.9	145.5
O1	C1	H1	C4	243.7	244.6
H1	C1	O1	C2	113.5	78.4
H1	C1	C4	O2	329.6	23.8
H1	C1	C4	C3	214.1	265.1
H1	C1	C4	H4	95.3	146.3
O1	C2	H2	C3	112.2	115.4
O1	C2	H2	C5	237.8	237.7
C3	C2	H2	C5	125.6	122.3
H2	C2	C3	O3	312.7	336.3
H2	C2	C3	C4	69.3	94.9
H2	C2	C3	H3	187.0	213.7
H2	C2	C5	O4	185.9	304.1
H2	C2	C5	H5	305.3	64.1
H2	C2	C5	H5A	66.6	184.1
HO2	O2	C4	C3	290.2	294.7
HO2	O2	C4	H4	55.1	57.5
H3	C3	C2	C5	312.6	336.0
C2	C3	H3	O3	123.9	122.6
C2	C3	H3	C4	250.2	245.3
H3	C3	C2	H2	187.0	213.7
O3	C3	H3	C4	126.3	122.7
H3	C3	O3	HO3	304.7	302.6
H3	C3	C4	H4	47.0	0.0
C9	N3	HN3	C10	180.0	180.1
HN3	N3	C9	N4	180.6	180.0
HN3	N3	C9	N5	0.7	359.9
HN3	N3	C10	O5	0.6	0.1
HN3	N3	C10	C6	180.2	179.9
HO3	O3	C3	C4	71.3	65.4
HO3	O3	C3	H3	304.7	302.6
C1	C4	H4	O2	235.8	237.4
C1	C4	H4	C3	112.2	114.7
H4	C4	C1	H1	95.3	146.3
O2	C4	H4	C3	236.4	237.3
H4	C4	O2	HO2	55.1	57.5
H4	C4	C3	H3	47.0	0.0
C2	C5	H5	O4	243.9	240.0
H5	C5	C2	H2	305.3	64.1
C2	C5	H5	H5A	121.9	120.0
O4	C5	H5	H5A	238.1	240.0
C2	C5	H5A	O4	116.1	120.0
H5A	C5	C2	H2	66.6	184.1
C2	C5	H5A	H5	238.1	240.0
O4	C5	H5A	H5	122.0	120.0
C9	N5	HN5	HN5A	180.0	180.1
C9	N5	HN5A	HN5	180.0	179.9
N1	C8	H8	N2	180.0	180.0
H8	C8	N2	C11	2.6	0.2
N2	C11	H11	C12	235.6	240.0
N2	C11	H11	H11A	117.8	120.0
C12	C11	H11	H11A	242.2	240.0
H11	C11	C12	H12	200.3	299.9
H11	C11	C12	H12A	79.1	180.0
N2	C11	H11A	C12	124.4	120.0
N2	C11	H11A	H11	242.2	240.0
C12	C11	H11A	H11	117.8	120.0
H11A	C11	C12	H12	81.7	180.0
H11A	C11	C12	H12A	320.5	60.0
H12	C12	O6	C13	301.1	299.9
O6	C12	H12	C11	243.2	240.0
O6	C12	H12	H12A	121.6	120.0
H12	C12	C11	H11	200.3	299.9
H12	C12	C11	H11A	81.7	180.0
C11	C12	H12	H12A	238.4	240.0
H12A	C12	O6	C13	62.2	60.0
O6	C12	H12A	C11	116.8	120.0
O6	C12	H12A	H12	238.4	240.0
H12A	C12	C11	H11	79.1	180.0
H12A	C12	C11	H11A	320.5	60.0
C11	C12	H12A	H12	121.6	119.9
H14	C14	C13	C18	179.6	180.2
C13	C14	H14	C15	180.0	180.0
H14	C14	C15	C16	179.6	180.0
H14	C14	C15	H15	359.6	360.0
C14	C15	H15	C16	180.0	180.0
H15	C15	C14	H14	359.6	360.0
H15	C15	C16	C17	181.5	180.0
C16	C17	H17	C18	180.0	179.7
H17	C17	C18	H18	0.9	360.0
C13	C18	H18	C17	180.0	179.8
H18	C18	C17	H17	0.9	360.0
HO8	O8	P1	O9	230.4	60.0