Atom Nomenclature for 6L0

The atom nomenclature in PDB data files was revised with the release of data in the PDB Format Version 3.0. These changes make the PDB atom names used by PDB compliant with existing IUPAC nomenclature for standard amino acid and nucleotides (Pure & Appl. Chem., 70, 117-142, 1998) with the exception of the well established convention for C-terminal atoms OXT and HXT. A small number of additional changes were introduced in Version 3 to make atom labeling more conventional. The following chemical diagrams and tables provide the correspondences between atom names used in Version 3 and Version 2 PDB formats.

Labeled Chemical Diagrams

Chemical diagram with format V3 atom labels (heavy atoms)
Chemical diagram with format V3 atom labels (all atoms)
Chemical diagram with format V2 atom labels (heavy atoms)
Chemical diagram with format V2 atom labels (all atoms)

Atom Name Correspondences for 6L0

Atom Name (V3) Atom Name (V2)
CBA C1
CAX C2
CBJ C3
OAC O1
NBG N1
CAU C4
CAO C5
CAL C6
CAR C7
CBC C8
NBO N2
OAH O2
CBL C9
OAE O3
CAZ C10
CAW C11
OAA O4
CBH C12
NBE N3
CAS C13
CAM C14
CAJ C15
CAP C16
CBB C17
NBN N4
OAG O5
CBK C18
OAD O6
CAY C19
CAV C20
CBI C21
OAB O7
NBF N5
CAT C22
CAN C23
CAK C24
CAQ C25
CBD C26
NBP N6
CBM C27
OAF O8
OAI O9
H1 H1
H2 H2
H3 H3
H4 H4
H5 H5
H6 H6
H7 H7
H8 H8
H9 H9
H10 H10
H11 H11
H12 H12
H13 H13
H14 H14
H15 H15
H16 H16
H17 H17
H18 H18
H19 H19
H20 H20
H21 H21
H22 H22
H23 H23
H24 H24
H25 H25
H26 H26
H27 H27
H28 H28
H29 H29
H30 H30
H31 H31
H32 H32
H33 H33
H34 H34
H35 H35
H36 H36
H37 H37
H38 H38
H39 H39
H40 H40
H41 H41
H42 H42
H43 H43
H44 H44
H45 H45
H46 H46