PDB Chemical Component 6JZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 6JZ

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.519	1.530
C2	O1	1.444	1.429
O1	C3	1.450	1.430
C3	C4	1.529	1.530
C4	O2	1.435	1.429
O2	C5	1.441	1.429
C5	C6	1.519	1.530
C6	O3	1.439	1.428
O3	C7	1.432	1.429
C7	C8	1.528	1.530
C8	O4	1.431	1.429
O4	C9	1.442	1.429
C9	C10	1.543	1.530
C10	O5	1.464	1.428
O5	C11	1.449	1.429
C11	C12	1.519	1.530
C1	H1	1.100	1.090
C1	H1A	1.100	1.089
C1	H1B	1.100	1.091
C2	H2	1.100	1.090
C2	H2A	1.100	1.090
C3	H3	1.100	1.090
C3	H3A	1.100	1.090
C4	H4	1.100	1.091
C4	H4A	1.100	1.090
C5	H5	1.099	1.091
C5	H5A	1.100	1.090
C6	H6	1.100	1.091
C6	H6A	1.101	1.091
C7	H7	1.100	1.090
C7	H7A	1.100	1.089
C8	H8	1.100	1.090
C8	H8A	1.100	1.090
C9	H9	1.100	1.091
C9	H9A	1.101	1.090
C10	H10	1.100	1.090
C10	H10A	1.099	1.090
C11	H11	1.100	1.089
C11	H11A	1.100	1.090
C12	H12	1.100	1.090
C12	H12A	1.100	1.090
C12	H12B	1.100	1.091

Bond Angles for 6JZ

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	O1	112.2	109.5
C2	C1	H1	109.5	109.4
C2	C1	H1A	109.5	109.5
C2	C1	H1B	109.5	109.5
C1	C2	H2	108.8	109.4
C1	C2	H2A	108.8	109.5
C2	O1	C3	112.2	114.0
O1	C2	H2	108.8	109.5
O1	C2	H2A	108.8	109.5
O1	C3	C4	111.3	109.5
O1	C3	H3	109.0	109.5
O1	C3	H3A	109.0	109.5
C3	C4	O2	109.2	109.5
C4	C3	H3	109.0	109.5
C4	C3	H3A	109.0	109.5
C3	C4	H4	109.5	109.5
C3	C4	H4A	109.5	109.4
C4	O2	C5	114.1	114.0
O2	C4	H4	109.6	109.5
O2	C4	H4A	109.5	109.5
O2	C5	C6	110.0	109.5
O2	C5	H5	109.4	109.4
O2	C5	H5A	109.3	109.5
C5	C6	O3	113.0	109.5
C6	C5	H5	109.3	109.5
C6	C5	H5A	109.4	109.5
C5	C6	H6	108.6	109.4
C5	C6	H6A	108.6	109.4
C6	O3	C7	112.2	114.0
O3	C6	H6	108.6	109.5
O3	C6	H6A	108.6	109.5
O3	C7	C8	110.4	109.5
O3	C7	H7	109.2	109.5
O3	C7	H7A	109.2	109.5
C7	C8	O4	112.2	109.5
C8	C7	H7	109.2	109.4
C8	C7	H7A	109.2	109.5
C7	C8	H8	108.8	109.5
C7	C8	H8A	108.8	109.5
C8	O4	C9	110.8	114.0
O4	C8	H8	108.8	109.5
O4	C8	H8A	108.8	109.4
O4	C9	C10	112.1	109.5
O4	C9	H9	108.8	109.5
O4	C9	H9A	108.8	109.4
C9	C10	O5	117.2	109.5
C10	C9	H9	108.8	109.5
C10	C9	H9A	108.8	109.5
C9	C10	H10	107.5	109.5
C9	C10	H10A	107.5	109.5
C10	O5	C11	117.6	114.0
O5	C10	H10	107.5	109.5
O5	C10	H10A	107.5	109.5
O5	C11	C12	112.2	109.5
O5	C11	H11	108.8	109.5
O5	C11	H11A	108.8	109.4
C12	C11	H11	108.8	109.5
C12	C11	H11A	108.8	109.4
C11	C12	H12	109.5	109.5
C11	C12	H12A	109.4	109.5
C11	C12	H12B	109.5	109.5
H1	C1	H1A	109.5	109.5
H1	C1	H1B	109.5	109.5
H1A	C1	H1B	109.5	109.5
H2	C2	H2A	109.5	109.4
H3	C3	H3A	109.5	109.5
H4	C4	H4A	109.5	109.5
H5	C5	H5A	109.5	109.5
H6	C6	H6A	109.4	109.4
H7	C7	H7A	109.5	109.5
H8	C8	H8A	109.5	109.5
H9	C9	H9A	109.5	109.4
H10	C10	H10A	109.5	109.4
H11	C11	H11A	109.5	109.5
H12	C12	H12A	109.5	109.5
H12	C12	H12B	109.4	109.4
H12A	C12	H12B	109.5	109.5

Torsion Angles for 6JZ

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C1	C2	O1	C3	168.3	180.0
O1	C2	C1	H2	239.6	240.0
O1	C2	C1	H2A	120.4	120.0
H1	C1	C2	H1A	240.0	240.0
H1	C1	C2	H1B	120.0	120.0
H1A	C1	C2	H1B	240.0	240.0
H2	C2	C1	H2A	240.8	240.0
O1	C2	C1	H1	180.0	60.0
O1	C2	C1	H1A	300.0	180.0
O1	C2	C1	H1B	60.0	300.0
C1	C2	O1	H2	120.4	120.0
C1	C2	O1	H2A	239.6	240.0
C2	O1	C3	C4	190.2	180.0
C2	O1	C3	H3	310.5	300.0
C2	O1	C3	H3A	69.9	59.9
H2	C2	O1	H2A	119.2	120.0
C3	O1	C2	H2	47.9	60.0
C3	O1	C2	H2A	288.6	300.0
O1	C3	C4	O2	112.7	65.0
C4	C3	O1	H3	239.7	240.0
C4	C3	O1	H3A	120.3	120.0
O1	C3	C4	H4	232.7	185.0
O1	C3	C4	H4A	352.7	305.0
H3	C3	O1	H3A	240.5	240.0
O1	C3	C4	H3	120.3	120.0
O1	C3	C4	H3A	239.7	240.0
C3	C4	O2	C5	190.8	180.0
O2	C4	C3	H4	240.0	240.0
O2	C4	C3	H4A	119.9	120.0
H3	C3	C4	H3A	119.4	120.0
H4	C4	C3	H4A	239.9	240.0
O2	C4	C3	H3	352.4	305.0
O2	C4	C3	H3A	233.0	185.0
C3	C4	O2	H4	120.0	120.0
C3	C4	O2	H4A	240.1	240.0
C4	O2	C5	C6	91.3	180.0
C4	O2	C5	H5	211.4	300.0
C4	O2	C5	H5A	331.2	60.0
H4	C4	O2	H4A	120.1	120.0
C5	O2	C4	H4	70.8	60.0
C5	O2	C4	H4A	310.7	300.0
O2	C5	C6	O3	205.2	65.0
C6	C5	O2	H5	239.9	240.0
C6	C5	O2	H5A	120.1	120.0
O2	C5	C6	H6	325.7	185.0
O2	C5	C6	H6A	84.6	304.9
H5	C5	O2	H5A	240.2	240.0
O2	C5	C6	H5	120.1	120.0
O2	C5	C6	H5A	239.9	240.0
C5	C6	O3	C7	181.8	180.0
O3	C6	C5	H6	239.5	239.9
O3	C6	C5	H6A	120.5	120.0
H5	C5	C6	H5A	119.8	120.0
H6	C6	C5	H6A	241.1	240.1
O3	C6	C5	H5	85.1	305.0
O3	C6	C5	H5A	325.2	185.0
C5	C6	O3	H6	120.5	120.0
C5	C6	O3	H6A	239.5	240.0
C6	O3	C7	C8	216.3	180.0
C6	O3	C7	H7	336.4	300.0
C6	O3	C7	H7A	96.2	60.0
H6	C6	O3	H6A	118.9	120.0
C7	O3	C6	H6	61.2	60.0
C7	O3	C6	H6A	302.3	300.0
O3	C7	C8	O4	359.7	65.0
C8	C7	O3	H7	239.9	240.0
C8	C7	O3	H7A	120.1	120.0
O3	C7	C8	H8	120.0	185.0
O3	C7	C8	H8A	239.2	305.1
H7	C7	O3	H7A	240.3	240.0
O3	C7	C8	H7	120.1	120.0
O3	C7	C8	H7A	239.9	240.0
C7	C8	O4	C9	144.6	180.0
O4	C8	C7	H8	239.6	239.9
O4	C8	C7	H8A	120.4	119.9
H7	C7	C8	H7A	119.7	120.0
H8	C8	C7	H8A	240.8	240.0
O4	C8	C7	H7	239.5	305.0
O4	C8	C7	H7A	119.8	185.0
C7	C8	O4	H8	120.4	120.0
C7	C8	O4	H8A	239.6	240.1
C8	O4	C9	C10	162.3	180.0
C8	O4	C9	H9	282.7	300.0
C8	O4	C9	H9A	41.9	60.0
H8	C8	O4	H8A	119.2	120.0
C9	O4	C8	H8	24.2	60.0
C9	O4	C8	H8A	265.0	299.9
O4	C9	C10	O5	130.4	65.0
C10	C9	O4	H9	239.6	240.0
C10	C9	O4	H9A	120.4	120.0
O4	C9	C10	H10	251.5	185.0
O4	C9	C10	H10A	9.3	305.0
H9	C9	O4	H9A	240.8	240.0
O4	C9	C10	H9	120.4	120.0
O4	C9	C10	H9A	239.6	240.0
C9	C10	O5	C11	8.2	180.0
O5	C10	C9	H10	238.9	240.0
O5	C10	C9	H10A	121.1	120.0
H9	C9	C10	H9A	119.2	120.0
H10	C10	C9	H10A	242.2	240.0
O5	C10	C9	H9	10.0	305.0
O5	C10	C9	H9A	250.8	185.0
C9	C10	O5	H10	121.1	120.0
C9	C10	O5	H10A	238.9	240.0
C10	O5	C11	C12	184.0	180.0
C10	O5	C11	H11	304.5	300.0
C10	O5	C11	H11A	63.6	60.0
H10	C10	O5	H10A	117.8	120.0
C11	O5	C10	H10	247.1	60.0
C11	O5	C10	H10A	129.3	300.0
C12	C11	O5	H11	239.6	240.0
C12	C11	O5	H11A	120.4	120.0
O5	C11	C12	H12	180.0	60.0
O5	C11	C12	H12A	300.0	180.1
O5	C11	C12	H12B	60.0	300.1
H11	C11	O5	H11A	240.8	240.0
O5	C11	C12	H11	120.4	120.0
O5	C11	C12	H11A	239.6	240.0
H11	C11	C12	H11A	119.2	120.0
H12	C12	C11	H12A	240.0	239.9
H12	C12	C11	H12B	120.0	119.9
H12A	C12	C11	H12B	240.0	240.0
H1	C1	C2	O1	180.0	60.0
C2	C1	H1	H1A	120.0	120.0
C2	C1	H1	H1B	240.0	240.0
H1	C1	C2	H2	300.4	180.0
H1	C1	C2	H2A	59.6	300.0
H1A	C1	H1	H1B	120.0	120.0
H1A	C1	C2	O1	300.0	180.0
C2	C1	H1A	H1	240.0	240.0
C2	C1	H1A	H1B	120.0	120.0
H1A	C1	C2	H2	60.4	300.0
H1A	C1	C2	H2A	179.6	60.0
H1	C1	H1A	H1B	240.0	240.0
H1B	C1	C2	O1	60.0	300.0
C2	C1	H1B	H1	120.0	120.0
C2	C1	H1B	H1A	240.0	240.0
H1B	C1	C2	H2	180.4	60.0
H1B	C1	C2	H2A	299.6	180.0
H1	C1	H1B	H1A	120.0	120.0
C1	C2	H2	O1	237.6	240.0
H2	C2	C1	H1	300.4	180.0
H2	C2	C1	H1A	60.4	300.0
H2	C2	C1	H1B	180.4	60.0
C1	C2	H2	H2A	118.8	120.0
H2	C2	O1	C3	47.9	60.0
O1	C2	H2	H2A	241.2	240.0
C1	C2	H2A	O1	122.4	120.0
H2A	C2	C1	H1	59.6	300.0
H2A	C2	C1	H1A	179.6	60.0
H2A	C2	C1	H1B	299.6	180.0
C1	C2	H2A	H2	241.2	240.0
H2A	C2	O1	C3	288.6	300.0
O1	C2	H2A	H2	118.8	120.0
O1	C3	H3	C4	238.3	240.0
O1	C3	H3	H3A	119.2	120.0
H3	C3	C4	O2	352.4	305.0
C4	C3	H3	H3A	240.8	240.0
H3	C3	C4	H4	112.4	65.0
H3	C3	C4	H4A	232.5	185.0
O1	C3	H3A	C4	121.7	120.0
O1	C3	H3A	H3	240.8	240.0
H3A	C3	C4	O2	233.0	185.0
C4	C3	H3A	H3	119.2	120.0
H3A	C3	C4	H4	352.9	305.0
H3A	C3	C4	H4A	113.0	65.0
C3	C4	H4	O2	240.3	240.0
H4	C4	C3	H3	112.4	65.0
H4	C4	C3	H3A	352.9	305.0
C3	C4	H4	H4A	120.1	119.9
H4	C4	O2	C5	70.8	60.0
O2	C4	H4	H4A	239.9	239.9
C3	C4	H4A	O2	119.7	120.0
H4A	C4	C3	H3	232.5	185.0
H4A	C4	C3	H3A	113.0	65.0
C3	C4	H4A	H4	239.9	240.0
H4A	C4	O2	C5	310.7	300.0
O2	C4	H4A	H4	120.2	120.0
O2	C5	H5	C6	239.5	240.0
O2	C5	H5	H5A	119.8	120.0
H5	C5	C6	O3	85.1	305.0
C6	C5	H5	H5A	240.2	240.0
H5	C5	C6	H6	205.6	65.1
H5	C5	C6	H6A	324.5	185.0
O2	C5	H5A	C6	120.5	120.0
O2	C5	H5A	H5	240.2	240.0
H5A	C5	C6	O3	325.2	185.0
C6	C5	H5A	H5	119.8	120.0
H5A	C5	C6	H6	85.8	305.1
H5A	C5	C6	H6A	204.7	65.0
C5	C6	H6	O3	236.8	239.9
H6	C6	C5	H5	205.6	65.1
H6	C6	C5	H5A	85.8	305.1
C5	C6	H6	H6A	118.4	119.9
H6	C6	O3	C7	61.2	60.0
O3	C6	H6	H6A	241.6	240.0
C5	C6	H6A	O3	123.2	120.0
H6A	C6	C5	H5	324.5	185.0
H6A	C6	C5	H5A	204.7	65.0
C5	C6	H6A	H6	241.6	240.1
H6A	C6	O3	C7	302.3	300.0
O3	C6	H6A	H6	118.4	120.0
O3	C7	H7	C8	239.2	240.0
O3	C7	H7	H7A	119.6	120.0
H7	C7	C8	O4	239.5	305.0
C8	C7	H7	H7A	240.4	240.0
H7	C7	C8	H8	359.9	65.0
H7	C7	C8	H8A	119.1	185.1
O3	C7	H7A	C8	120.8	120.0
O3	C7	H7A	H7	240.4	240.0
H7A	C7	C8	O4	119.8	185.0
C8	C7	H7A	H7	119.6	120.0
H7A	C7	C8	H8	240.2	305.0
H7A	C7	C8	H8A	359.3	65.1
C7	C8	H8	O4	237.5	240.0
H8	C8	C7	H7	359.9	65.0
H8	C8	C7	H7A	240.2	305.0
C7	C8	H8	H8A	118.7	120.0
H8	C8	O4	C9	24.2	60.0
O4	C8	H8	H8A	241.2	240.0
C7	C8	H8A	O4	122.5	119.9
H8A	C8	C7	H7	119.1	185.1
H8A	C8	C7	H7A	359.3	65.1
C7	C8	H8A	H8	241.3	240.0
H8A	C8	O4	C9	265.0	299.9
O4	C8	H8A	H8	118.7	120.0
O4	C9	H9	C10	237.6	240.0
O4	C9	H9	H9A	118.8	120.0
H9	C9	C10	O5	10.0	305.0
C10	C9	H9	H9A	241.2	240.0
H9	C9	C10	H10	131.1	65.0
H9	C9	C10	H10A	248.9	185.0
O4	C9	H9A	C10	122.4	120.0
O4	C9	H9A	H9	241.2	240.0
H9A	C9	C10	O5	250.8	185.0
C10	C9	H9A	H9	118.8	120.0
H9A	C9	C10	H10	11.9	305.0
H9A	C9	C10	H10A	129.7	65.0
C9	C10	H10	O5	233.0	240.0
H10	C10	C9	H9	131.1	65.0
H10	C10	C9	H9A	11.9	305.0
C9	C10	H10	H10A	116.5	120.0
H10	C10	O5	C11	247.1	60.0
O5	C10	H10	H10A	243.5	240.0
C9	C10	H10A	O5	127.0	120.1
H10A	C10	C9	H9	248.9	185.0
H10A	C10	C9	H9A	129.7	65.0
C9	C10	H10A	H10	243.5	240.0
H10A	C10	O5	C11	129.3	300.0
O5	C10	H10A	H10	116.5	120.0
O5	C11	H11	C12	237.5	239.9
O5	C11	H11	H11A	118.8	120.0
C12	C11	H11	H11A	241.2	240.0
H11	C11	C12	H12	59.6	300.0
H11	C11	C12	H12A	179.6	60.0
H11	C11	C12	H12B	299.6	180.0
O5	C11	H11A	C12	122.5	120.0
O5	C11	H11A	H11	241.3	240.0
C12	C11	H11A	H11	118.8	120.0
H11A	C11	C12	H12	300.4	180.0
H11A	C11	C12	H12A	60.4	300.0
H11A	C11	C12	H12B	180.4	60.0
H12	C12	C11	H11	59.6	300.0
H12	C12	C11	H11A	300.4	180.0
C11	C12	H12	H12A	120.0	120.1
C11	C12	H12	H12B	240.0	240.1
H12A	C12	H12	H12B	120.0	120.0
H12A	C12	C11	H11	179.6	60.0
H12A	C12	C11	H11A	60.4	300.0
C11	C12	H12A	H12	240.0	240.0
C11	C12	H12A	H12B	120.0	120.0
H12	C12	H12A	H12B	240.0	240.1
H12B	C12	C11	H11	299.6	180.0
H12B	C12	C11	H11A	180.4	60.0
C11	C12	H12B	H12	120.0	120.0
C11	C12	H12B	H12A	240.0	239.9
H12	C12	H12B	H12A	120.0	120.0