C11 H17 N2 O8 P
336.235
DT
1',5'-ANHYDRO-2',3'-DIDEOXY-2'-(THYMIN-1-YL)-6'-O-PHOSPHORYL-D-ARABINO-HEXITOL
T
N
0
N
1999-07-23
1EJZ
N
2011-06-04
RCSB
REL
ATOMN
6HT
DNA linking
P
0
-261.937
91.135
-264.255
1
N
P
6HT
N
0.671
0.157
-4.153
1
N
P
O1P
0
-260.785
91.636
-265.037
1
N
OP1
6HT
N
1.822
0.887
-3.577
2
N
O
O2P
0
-261.724
90.147
-263.175
1
N
OP2
6HT
N
1.196
-0.880
-5.266
3
N
O
O3P
0
-262.717
92.398
-263.636
1
N
OP3
6HT
Y
-0.343
1.206
-4.833
4
N
O
O5*
0
-263.025
90.535
-265.278
1
N
O5'
6HT
N
-0.091
-0.647
-2.986
5
N
O
C5*
0
-264.320
90.120
-264.806
1
N
C5'
6HT
N
-0.531
0.323
-2.034
6
N
C
C4*
0
-265.348
90.079
-265.922
1
N
C4'
6HT
N
-1.268
-0.379
-0.892
7
R
C
O4*
0
-265.483
91.398
-266.491
1
N
O4'
6HT
N
-0.387
-1.304
-0.257
8
N
O
C3*
0
-264.917
89.055
-266.977
1
N
C3'
6HT
N
-1.744
0.663
0.122
9
S
C
O3*
0
-264.996
87.735
-266.437
1
N
O3'
6HT
N
-2.604
1.602
-0.526
10
N
O
C2*
0
-265.792
89.162
-268.218
1
N
C2'
6HT
N
-2.510
-0.045
1.247
11
N
C
C1*
0
-265.823
90.579
-268.764
1
N
C1'
6HT
N
-1.622
-1.156
1.818
12
S
C
C6*
0
-266.323
91.497
-267.652
1
N
C6'
6HT
N
-1.155
-2.061
0.675
13
N
C
N1
0
-264.474
90.996
-269.233
1
N
N1
6HT
N
-0.458
-0.561
2.479
14
N
N
C2
0
-264.244
91.005
-270.598
1
N
C2
6HT
N
-0.633
0.232
3.551
15
N
C
O2
0
-265.114
90.705
-271.414
1
N
O2
6HT
N
-1.758
0.446
3.960
16
N
O
N3
0
-262.975
91.376
-270.997
1
N
N3
6HT
N
0.417
0.791
4.178
17
N
N
C4
0
-261.928
91.733
-270.172
1
N
C4
6HT
N
1.671
0.559
3.740
18
N
C
O4
0
-260.834
92.038
-270.643
1
N
O4
6HT
N
2.624
1.064
4.306
19
N
O
C5
0
-262.253
91.700
-268.767
1
N
C5
6HT
N
1.870
-0.269
2.610
20
N
C
C5M
0
-261.185
92.071
-267.743
1
N
C5M
6HT
N
3.261
-0.541
2.097
21
N
C
C6
0
-263.483
91.342
-268.346
1
N
C6
6HT
N
0.797
-0.818
2.000
22
N
C
2HOP
0
-262.463
89.825
-262.672
0
N
HOP2
6HT
N
1.645
-0.359
-5.945
23
N
H
3HOP
0
-263.456
92.076
-263.133
0
N
HOP3
6HT
N
-1.077
0.690
-5.195
24
N
H
1H5*
0
-264.253
89.119
-264.403
1
N
H5'
6HT
N
-1.203
1.030
-2.520
25
N
H
2H5*
0
-264.645
90.816
-264.020
0
N
H5''
6HT
N
0.331
0.857
-1.635
26
N
H
H4*
0
-266.306
89.771
-265.506
1
N
H4'
6HT
N
-2.128
-0.915
-1.292
27
N
H
H3*
0
-263.884
89.259
-267.259
1
N
H3'
6HT
N
-0.883
1.184
0.540
28
N
H
HO3*
0
-264.728
87.100
-267.091
0
N
HO3'
6HT
Y
-2.880
2.239
0.147
29
N
H
1H2*
0
-265.396
88.495
-268.988
1
N
H2'
6HT
N
-3.427
-0.479
0.848
30
N
H
2H2*
0
-266.811
88.866
-267.951
0
N
H2''
6HT
N
-2.753
0.670
2.031
31
N
H
H1*
0
-266.521
90.621
-269.602
1
N
H1'
6HT
N
-2.190
-1.743
2.539
32
N
H
1H6*
0
-266.327
92.527
-268.005
0
N
H6'1
6HT
N
-0.543
-2.867
1.079
33
N
H
2H6*
0
-267.341
91.221
-267.387
0
N
H6'2
6HT
N
-2.023
-2.484
0.171
34
N
H
H3
0
-262.796
91.391
-271.989
1
N
H3
6HT
N
0.273
1.361
4.950
35
N
H
1H5M
0
-261.524
92.923
-267.156
1
N
H71
6HT
N
3.986
-0.014
2.717
36
N
H
2H5M
0
-260.261
92.330
-268.258
1
N
H72
6HT
N
3.460
-1.612
2.137
37
N
H
3H5M
0
-261.006
91.224
-267.081
1
N
H73
6HT
N
3.343
-0.195
1.067
38
N
H
H6
0
-263.696
91.335
-267.277
1
N
H6
6HT
N
0.930
-1.456
1.139
39
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
doub
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
doub
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
RCSB
RCSB
O=C1NC(=O)N(C=C1C)C2CC(O)C(OC2)COP(=O)(O)O
CC1=CN([C@@H]2CO[C@H](CO[P](O)(O)=O)[C@@H](O)C2)C(=O)NC1=O
CC1=CN([CH]2CO[CH](CO[P](O)(O)=O)[CH](O)C2)C(=O)NC1=O
CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](OC2)COP(=O)(O)O)O
CC1=CN(C(=O)NC1=O)C2CC(C(OC2)COP(=O)(O)O)O
InChI=1S/C11H17N2O8P/c1-6-3-13(11(16)12-10(6)15)7-2-8(14)9(20-4-7)5-21-22(17,18)19/h3,7-9,14H,2,4-5H2,1H3,(H,12,15,16)(H2,17,18,19)/t7-,8-,9+/m0/s1
CCUHDSVZYOGFIW-XHNCKOQMSA-N
1,5-anhydro-2,3-dideoxy-2-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-6-O-phosphono-D-arabino-hexitol
[(2R,3S,5S)-3-hydroxy-5-(5-methyl-2,4-dioxo-pyrimidin-1-yl)oxan-2-yl]methyl dihydrogen phosphate