PDB Chemical Component 6HN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6HN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
CE |
1.454 |
1.464 |
| N1 |
O2 |
1.321 |
1.219 |
| N1 |
O1 |
1.328 |
1.218 |
| N |
CA |
1.488 |
1.470 |
| N |
H |
1.000 |
1.009 |
| N |
HN2 |
1.000 |
1.009 |
| CA |
C |
1.542 |
1.507 |
| CA |
CB |
1.554 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| C |
OXT |
1.262 |
1.342 |
| C |
O |
1.262 |
1.209 |
| CB |
CG |
1.530 |
1.530 |
| CB |
HB |
1.100 |
1.090 |
| CB |
HBA |
1.100 |
1.090 |
| CG |
CD |
1.520 |
1.529 |
| CG |
HG |
1.100 |
1.091 |
| CG |
HGA |
1.100 |
1.090 |
| CD |
CE |
1.527 |
1.530 |
| CD |
HD |
1.100 |
1.091 |
| CD |
HDA |
1.101 |
1.090 |
| CE |
HE |
1.100 |
1.090 |
| CE |
HEA |
1.101 |
1.090 |
| OXT |
HXT |
0.951 |
0.967 |
Bond Angles for 6HN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CE |
N1 |
O2 |
118.7 |
120.0 |
| CE |
N1 |
O1 |
121.7 |
120.0 |
| N1 |
CE |
CD |
112.9 |
109.5 |
| N1 |
CE |
HE |
108.3 |
109.5 |
| N1 |
CE |
HEA |
107.6 |
109.5 |
| O2 |
N1 |
O1 |
119.6 |
120.0 |
| CA |
N |
H |
109.5 |
111.0 |
| CA |
N |
HN2 |
109.5 |
110.9 |
| N |
CA |
C |
110.2 |
109.4 |
| N |
CA |
CB |
108.9 |
109.5 |
| N |
CA |
HA |
110.4 |
109.4 |
| H |
N |
HN2 |
109.5 |
111.0 |
| C |
CA |
CB |
112.5 |
109.5 |
| C |
CA |
HA |
106.7 |
109.4 |
| CA |
C |
OXT |
120.1 |
120.0 |
| CA |
C |
O |
120.0 |
120.0 |
| CB |
CA |
HA |
108.1 |
109.5 |
| CA |
CB |
CG |
113.1 |
109.5 |
| CA |
CB |
HB |
108.3 |
109.5 |
| CA |
CB |
HBA |
107.4 |
109.5 |
| OXT |
C |
O |
120.0 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.0 |
| CG |
CB |
HB |
108.3 |
109.4 |
| CG |
CB |
HBA |
107.4 |
109.5 |
| CB |
CG |
CD |
109.8 |
109.5 |
| CB |
CG |
HG |
109.3 |
109.4 |
| CB |
CG |
HGA |
109.3 |
109.5 |
| HB |
CB |
HBA |
112.4 |
109.5 |
| CD |
CG |
HG |
109.4 |
109.4 |
| CD |
CG |
HGA |
109.3 |
109.5 |
| CG |
CD |
CE |
107.9 |
109.5 |
| CG |
CD |
HD |
110.0 |
109.4 |
| CG |
CD |
HDA |
110.4 |
109.5 |
| HG |
CG |
HGA |
109.7 |
109.5 |
| CE |
CD |
HD |
110.0 |
109.4 |
| CE |
CD |
HDA |
110.4 |
109.5 |
| CD |
CE |
HE |
108.3 |
109.5 |
| CD |
CE |
HEA |
107.6 |
109.4 |
| HD |
CD |
HDA |
108.2 |
109.5 |
| HE |
CE |
HEA |
112.2 |
109.5 |
Torsion Angles for 6HN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O2 |
N1 |
CE |
O1 |
178.4 |
180.2 |
| CG |
CD |
CE |
N1 |
221.7 |
180.0 |
| N1 |
CE |
CD |
HD |
101.7 |
60.0 |
| N1 |
CE |
CD |
HDA |
342.4 |
300.0 |
| CD |
CE |
N1 |
HE |
240.0 |
240.0 |
| CD |
CE |
N1 |
HEA |
118.5 |
120.0 |
| HE |
CE |
N1 |
HEA |
238.5 |
240.0 |
| CE |
N1 |
O2 |
O1 |
181.5 |
179.8 |
| O2 |
N1 |
CE |
CD |
215.2 |
45.0 |
| O2 |
N1 |
CE |
HE |
335.2 |
165.0 |
| O2 |
N1 |
CE |
HEA |
96.7 |
285.0 |
| CE |
N1 |
O1 |
O2 |
178.4 |
180.2 |
| O1 |
N1 |
CE |
CD |
36.8 |
224.7 |
| O1 |
N1 |
CE |
HE |
156.8 |
344.7 |
| O1 |
N1 |
CE |
HEA |
278.3 |
104.8 |
| H |
N |
CA |
HN2 |
240.0 |
236.0 |
| C |
CA |
N |
CB |
123.8 |
120.0 |
| C |
CA |
N |
HA |
242.4 |
240.1 |
| N |
CA |
C |
OXT |
180.0 |
160.0 |
| N |
CA |
C |
O |
0.1 |
339.9 |
| CB |
CA |
N |
HA |
118.6 |
120.0 |
| N |
CA |
CB |
CG |
81.6 |
295.0 |
| N |
CA |
CB |
HB |
201.6 |
55.0 |
| N |
CA |
CB |
HBA |
323.1 |
175.0 |
| CA |
N |
H |
HN2 |
120.0 |
123.9 |
| H |
N |
CA |
C |
221.9 |
296.1 |
| H |
N |
CA |
CB |
98.1 |
176.0 |
| H |
N |
CA |
HA |
339.6 |
56.0 |
| CA |
N |
HN2 |
H |
240.0 |
236.0 |
| HN2 |
N |
CA |
C |
342.0 |
60.1 |
| HN2 |
N |
CA |
CB |
218.1 |
300.0 |
| HN2 |
N |
CA |
HA |
99.6 |
180.0 |
| C |
CA |
N |
H |
221.9 |
296.1 |
| C |
CA |
N |
HN2 |
342.0 |
60.1 |
| N |
CA |
C |
CB |
238.3 |
240.0 |
| N |
CA |
C |
HA |
119.9 |
119.9 |
| CB |
CA |
C |
HA |
241.6 |
240.0 |
| C |
CA |
CB |
CG |
319.1 |
175.0 |
| C |
CA |
CB |
HB |
79.1 |
295.0 |
| C |
CA |
CB |
HBA |
200.7 |
55.0 |
| OXT |
C |
CA |
O |
179.9 |
180.0 |
| CA |
C |
OXT |
HXT |
180.1 |
179.9 |
| CB |
CA |
N |
H |
98.1 |
176.0 |
| CB |
CA |
N |
HN2 |
218.1 |
300.0 |
| N |
CA |
CB |
C |
122.5 |
120.0 |
| N |
CA |
CB |
HA |
240.0 |
240.0 |
| C |
CA |
CB |
HA |
117.5 |
120.0 |
| CB |
CA |
C |
OXT |
301.7 |
280.0 |
| CB |
CA |
C |
O |
121.8 |
100.0 |
| CG |
CB |
CA |
HB |
240.0 |
240.0 |
| CG |
CB |
CA |
HBA |
118.4 |
120.0 |
| CA |
CB |
CG |
CD |
180.1 |
180.0 |
| CA |
CB |
CG |
HG |
300.0 |
300.0 |
| CA |
CB |
CG |
HGA |
60.2 |
60.0 |
| HB |
CB |
CA |
HBA |
238.4 |
240.0 |
| HA |
CA |
N |
H |
339.6 |
56.0 |
| HA |
CA |
N |
HN2 |
99.6 |
180.0 |
| N |
CA |
HA |
C |
240.2 |
240.1 |
| N |
CA |
HA |
CB |
119.0 |
120.0 |
| C |
CA |
HA |
CB |
238.8 |
240.0 |
| HA |
CA |
C |
OXT |
60.0 |
40.1 |
| HA |
CA |
C |
O |
240.2 |
220.0 |
| HA |
CA |
CB |
CG |
201.6 |
55.0 |
| HA |
CA |
CB |
HB |
321.6 |
175.0 |
| HA |
CA |
CB |
HBA |
83.2 |
295.0 |
| OXT |
C |
CA |
CB |
301.7 |
280.0 |
| OXT |
C |
CA |
HA |
60.0 |
40.1 |
| CA |
C |
OXT |
O |
180.1 |
180.0 |
| O |
C |
CA |
CB |
121.8 |
100.0 |
| O |
C |
CA |
HA |
240.2 |
220.0 |
| CA |
C |
O |
OXT |
179.9 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| CG |
CB |
CA |
HA |
201.6 |
55.0 |
| CA |
CB |
CG |
HB |
120.0 |
120.0 |
| CA |
CB |
CG |
HBA |
241.6 |
240.0 |
| HB |
CB |
CG |
HBA |
121.6 |
120.0 |
| CD |
CG |
CB |
HG |
240.0 |
240.0 |
| CD |
CG |
CB |
HGA |
119.9 |
120.1 |
| CB |
CG |
CD |
CE |
181.0 |
180.0 |
| CB |
CG |
CD |
HD |
301.0 |
300.0 |
| CB |
CG |
CD |
HDA |
60.4 |
59.9 |
| HG |
CG |
CB |
HGA |
239.9 |
240.0 |
| HB |
CB |
CA |
HA |
321.6 |
175.0 |
| CA |
CB |
HB |
CG |
237.0 |
240.0 |
| CA |
CB |
HB |
HBA |
118.5 |
120.0 |
| CG |
CB |
HB |
HBA |
241.5 |
240.0 |
| HB |
CB |
CG |
CD |
60.0 |
60.0 |
| HB |
CB |
CG |
HG |
180.0 |
180.0 |
| HB |
CB |
CG |
HGA |
300.2 |
300.0 |
| HBA |
CB |
CA |
HA |
83.2 |
295.0 |
| CA |
CB |
HBA |
CG |
122.0 |
120.0 |
| CA |
CB |
HBA |
HB |
241.0 |
240.0 |
| CG |
CB |
HBA |
HB |
119.0 |
120.0 |
| HBA |
CB |
CG |
CD |
298.5 |
300.1 |
| HBA |
CB |
CG |
HG |
58.5 |
60.0 |
| HBA |
CB |
CG |
HGA |
178.6 |
180.0 |
| N1 |
CE |
CD |
CG |
221.7 |
180.0 |
| CD |
CG |
CB |
HB |
60.0 |
60.0 |
| CD |
CG |
CB |
HBA |
298.5 |
300.1 |
| CB |
CG |
CD |
HG |
120.0 |
120.0 |
| CB |
CG |
CD |
HGA |
240.1 |
240.0 |
| HG |
CG |
CD |
HGA |
120.2 |
120.0 |
| CE |
CD |
CG |
HD |
240.0 |
240.0 |
| CE |
CD |
CG |
HDA |
120.6 |
120.1 |
| CG |
CD |
CE |
HE |
101.8 |
59.9 |
| CG |
CD |
CE |
HEA |
340.3 |
300.0 |
| HD |
CD |
CG |
HDA |
240.7 |
240.0 |
| HG |
CG |
CB |
HB |
180.0 |
180.0 |
| HG |
CG |
CB |
HBA |
58.5 |
60.0 |
| CB |
CG |
HG |
CD |
239.7 |
240.0 |
| CB |
CG |
HG |
HGA |
119.9 |
120.0 |
| CD |
CG |
HG |
HGA |
240.1 |
240.0 |
| HG |
CG |
CD |
CE |
61.0 |
60.0 |
| HG |
CG |
CD |
HD |
181.1 |
180.0 |
| HG |
CG |
CD |
HDA |
300.4 |
300.0 |
| HGA |
CG |
CB |
HB |
300.2 |
300.0 |
| HGA |
CG |
CB |
HBA |
178.6 |
180.0 |
| CB |
CG |
HGA |
CD |
120.2 |
120.0 |
| CB |
CG |
HGA |
HG |
240.1 |
240.0 |
| CD |
CG |
HGA |
HG |
119.9 |
120.0 |
| HGA |
CG |
CD |
CE |
300.9 |
300.0 |
| HGA |
CG |
CD |
HD |
60.9 |
60.0 |
| HGA |
CG |
CD |
HDA |
180.3 |
180.0 |
| CD |
CE |
N1 |
O2 |
215.2 |
45.0 |
| CD |
CE |
N1 |
O1 |
36.8 |
224.7 |
| N1 |
CE |
CD |
HE |
120.0 |
120.0 |
| N1 |
CE |
CD |
HEA |
241.5 |
240.0 |
| CE |
CD |
CG |
HG |
61.0 |
60.0 |
| CE |
CD |
CG |
HGA |
300.9 |
300.0 |
| CG |
CD |
CE |
HD |
120.0 |
120.0 |
| CG |
CD |
CE |
HDA |
239.4 |
240.0 |
| HD |
CD |
CE |
HDA |
119.4 |
120.0 |
| HE |
CE |
CD |
HEA |
121.5 |
120.0 |
| HD |
CD |
CG |
HG |
181.1 |
180.0 |
| HD |
CD |
CG |
HGA |
60.9 |
60.0 |
| CG |
CD |
HD |
CE |
241.3 |
240.0 |
| CG |
CD |
HD |
HDA |
120.6 |
120.0 |
| CE |
CD |
HD |
HDA |
239.4 |
240.0 |
| HD |
CD |
CE |
HE |
341.8 |
300.0 |
| HD |
CD |
CE |
HEA |
220.3 |
180.0 |
| HDA |
CD |
CG |
HG |
300.4 |
300.0 |
| HDA |
CD |
CG |
HGA |
180.3 |
180.0 |
| CG |
CD |
HDA |
CE |
119.1 |
120.0 |
| CG |
CD |
HDA |
HD |
239.6 |
240.0 |
| CE |
CD |
HDA |
HD |
120.4 |
120.0 |
| HDA |
CD |
CE |
HE |
222.4 |
180.0 |
| HDA |
CD |
CE |
HEA |
100.9 |
60.0 |
| HE |
CE |
N1 |
O2 |
335.2 |
165.0 |
| HE |
CE |
N1 |
O1 |
156.8 |
344.7 |
| N1 |
CE |
HE |
CD |
237.2 |
240.0 |
| N1 |
CE |
HE |
HEA |
118.6 |
120.0 |
| HE |
CE |
CD |
HD |
341.8 |
300.0 |
| HE |
CE |
CD |
HDA |
222.4 |
180.0 |
| CD |
CE |
HE |
HEA |
241.4 |
240.0 |
| HEA |
CE |
N1 |
O2 |
96.7 |
285.0 |
| HEA |
CE |
N1 |
O1 |
278.3 |
104.8 |
| N1 |
CE |
HEA |
CD |
121.9 |
120.0 |
| N1 |
CE |
HEA |
HE |
240.9 |
240.0 |
| HEA |
CE |
CD |
HD |
220.3 |
180.0 |
| HEA |
CE |
CD |
HDA |
100.9 |
60.0 |
| CD |
CE |
HEA |
HE |
119.1 |
120.0 |
| HXT |
OXT |
C |
O |
0.0 |
360.0 |