PDB Chemical Component 6GR
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6GR
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
OAA |
CAN |
1.265 |
1.216 |
CAN |
OAC |
1.223 |
1.348 |
CAN |
CAP |
1.529 |
1.474 |
CAJ |
CAP |
1.397 |
1.397 |
CAJ |
CAH |
1.412 |
1.378 |
CAP |
CAO |
1.419 |
1.402 |
CAH |
CAG |
1.377 |
1.385 |
CAO |
O1 |
1.425 |
1.356 |
CAO |
CAI |
1.400 |
1.388 |
CAG |
CAI |
1.408 |
1.380 |
O6 |
C6 |
1.345 |
1.429 |
O1 |
C1 |
1.341 |
1.429 |
C6 |
C5 |
1.482 |
1.530 |
O5 |
C5 |
1.437 |
1.428 |
O5 |
C1 |
1.481 |
1.432 |
C5 |
C4 |
1.490 |
1.530 |
C1 |
C2 |
1.532 |
1.532 |
C2 |
O2 |
1.463 |
1.429 |
C2 |
C3 |
1.458 |
1.532 |
C4 |
O4 |
1.417 |
1.430 |
C4 |
C3 |
1.504 |
1.531 |
C3 |
O3 |
1.436 |
1.429 |
C3 |
H3 |
1.100 |
1.090 |
C2 |
H2 |
1.100 |
1.090 |
C4 |
H4 |
1.100 |
1.090 |
C5 |
H5 |
1.100 |
1.090 |
C6 |
H61 |
1.100 |
1.090 |
C6 |
H62 |
1.100 |
1.091 |
C1 |
H1 |
1.100 |
1.090 |
OAC |
H8 |
0.950 |
0.967 |
CAJ |
H9 |
1.080 |
1.080 |
CAH |
H10 |
1.080 |
1.079 |
CAG |
H11 |
1.080 |
1.080 |
CAI |
H12 |
1.080 |
1.080 |
O6 |
HO6 |
0.950 |
0.966 |
O4 |
HO4 |
0.950 |
0.967 |
O3 |
HO3 |
0.949 |
0.968 |
O2 |
HO2 |
0.950 |
0.968 |
Bond Angles for 6GR
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAA |
CAN |
OAC |
120.1 |
120.0 |
OAA |
CAN |
CAP |
117.9 |
120.0 |
OAC |
CAN |
CAP |
122.0 |
120.0 |
CAN |
OAC |
H8 |
109.5 |
117.1 |
CAN |
CAP |
CAO |
125.4 |
120.2 |
CAJ |
CAP |
CAO |
119.5 |
119.6 |
CAJ |
CAH |
CAG |
119.6 |
120.3 |
CAH |
CAJ |
H9 |
119.6 |
120.0 |
CAJ |
CAH |
H10 |
120.2 |
119.9 |
CAP |
CAO |
O1 |
125.6 |
120.2 |
CAP |
CAO |
CAI |
118.9 |
119.7 |
CAH |
CAG |
CAI |
120.2 |
120.4 |
CAG |
CAH |
H10 |
120.2 |
119.9 |
CAH |
CAG |
H11 |
119.9 |
119.8 |
CAO |
CAI |
H12 |
119.6 |
119.9 |
CAI |
CAG |
H11 |
119.9 |
119.8 |
CAG |
CAI |
H12 |
119.6 |
120.0 |
O6 |
C6 |
H61 |
107.7 |
109.5 |
O6 |
C6 |
H62 |
107.8 |
109.4 |
O1 |
C1 |
H1 |
109.8 |
109.5 |
C6 |
C5 |
H5 |
106.3 |
109.5 |
O5 |
C5 |
H5 |
106.9 |
109.5 |
O5 |
C1 |
H1 |
107.8 |
109.6 |
C5 |
C4 |
O4 |
110.8 |
109.5 |
C5 |
C4 |
H4 |
107.0 |
109.6 |
C1 |
C2 |
O2 |
113.3 |
109.5 |
C1 |
C2 |
H2 |
106.6 |
109.6 |
O2 |
C2 |
H2 |
107.4 |
109.5 |
C2 |
O2 |
HO2 |
109.5 |
114.0 |
C2 |
C3 |
O3 |
108.4 |
109.5 |
C2 |
C3 |
H3 |
107.1 |
109.5 |
O4 |
C4 |
H4 |
107.9 |
109.5 |
C4 |
O4 |
HO4 |
109.5 |
114.0 |
C4 |
C3 |
O3 |
111.2 |
109.5 |
C4 |
C3 |
H3 |
106.6 |
109.6 |
O3 |
C3 |
H3 |
107.4 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
H61 |
C6 |
H62 |
109.5 |
109.5 |
Torsion Angles for 6GR
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
OAC |
CAN |
OAA |
CAP |
180.1 |
179.9 |
OAA |
CAN |
OAC |
H8 |
360.0 |
0.1 |
OAA |
CAN |
CAP |
CAO |
175.9 |
359.9 |
OAA |
CAN |
OAC |
CAP |
179.9 |
180.1 |
OAC |
CAN |
CAP |
CAO |
355.8 |
180.0 |
OAA |
CAN |
CAP |
OAC |
180.1 |
179.9 |
CAP |
CAN |
OAC |
H8 |
180.1 |
180.0 |
CAJ |
CAP |
CAN |
CAO |
180.2 |
180.3 |
CAN |
CAP |
CAO |
O1 |
0.4 |
0.0 |
CAN |
CAP |
CAO |
CAI |
180.2 |
179.8 |
CAN |
CAP |
CAJ |
CAO |
179.8 |
179.7 |
CAJ |
CAP |
CAO |
O1 |
180.2 |
179.8 |
CAJ |
CAP |
CAO |
CAI |
360.0 |
359.5 |
CAH |
CAJ |
CAP |
CAO |
360.0 |
0.2 |
CAJ |
CAH |
CAG |
CAI |
0.1 |
360.0 |
CAG |
CAH |
CAJ |
H10 |
180.0 |
180.0 |
CAJ |
CAH |
CAG |
H11 |
180.0 |
179.9 |
CAP |
CAO |
CAI |
H12 |
180.1 |
180.3 |
CAG |
CAH |
CAJ |
H9 |
180.0 |
180.0 |
CAJ |
CAH |
CAG |
H10 |
180.0 |
180.0 |
CAI |
CAG |
CAH |
H11 |
180.0 |
180.1 |
CAH |
CAG |
CAI |
H12 |
179.9 |
179.9 |
CAP |
CAO |
O1 |
CAI |
179.8 |
179.7 |
O1 |
CAO |
CAI |
H12 |
359.9 |
0.1 |
CAO |
O1 |
C1 |
H1 |
38.1 |
55.0 |
CAP |
CAO |
CAI |
O1 |
180.2 |
180.3 |
CAO |
CAI |
CAG |
H11 |
179.9 |
179.8 |
CAG |
CAI |
CAO |
H12 |
180.0 |
180.2 |
CAP |
CAO |
CAI |
CAG |
0.1 |
0.5 |
CAI |
CAG |
CAH |
H10 |
180.1 |
180.0 |
CAH |
CAG |
CAI |
H11 |
180.0 |
179.9 |
CAO |
CAI |
CAG |
H12 |
180.0 |
179.8 |
O6 |
C6 |
C5 |
H5 |
348.5 |
54.9 |
H61 |
C6 |
O6 |
H62 |
242.0 |
120.0 |
O5 |
C1 |
O1 |
H1 |
245.6 |
239.8 |
O1 |
C1 |
C2 |
O2 |
261.5 |
182.3 |
O1 |
C1 |
C2 |
H2 |
19.4 |
302.5 |
O5 |
C5 |
C6 |
H5 |
243.4 |
240.0 |
C6 |
C5 |
C4 |
O4 |
310.6 |
297.5 |
C6 |
C5 |
C4 |
H4 |
68.0 |
57.6 |
C6 |
C5 |
O5 |
H5 |
116.3 |
120.0 |
O5 |
C5 |
C4 |
O4 |
183.1 |
177.5 |
O5 |
C5 |
C4 |
H4 |
300.5 |
297.6 |
O1 |
C1 |
O5 |
H1 |
115.8 |
120.2 |
C1 |
O5 |
C5 |
H5 |
46.7 |
58.9 |
O5 |
C1 |
C2 |
O2 |
143.3 |
62.4 |
O5 |
C1 |
C2 |
H2 |
261.2 |
182.6 |
O4 |
C4 |
C5 |
H4 |
242.6 |
239.9 |
C5 |
C4 |
O4 |
HO4 |
180.0 |
180.3 |
C5 |
C4 |
C3 |
O3 |
117.2 |
62.8 |
C5 |
C4 |
C3 |
H3 |
234.0 |
183.1 |
O2 |
C2 |
C1 |
H2 |
242.0 |
239.8 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
60.3 |
C1 |
C2 |
C3 |
O3 |
203.2 |
297.1 |
C1 |
C2 |
C3 |
H3 |
87.6 |
176.9 |
C1 |
C2 |
O2 |
H2 |
117.5 |
120.3 |
O2 |
C2 |
C3 |
O3 |
76.8 |
177.2 |
O2 |
C2 |
C3 |
H3 |
321.2 |
57.1 |
C4 |
C3 |
C2 |
O3 |
125.7 |
119.9 |
C4 |
C3 |
C2 |
H3 |
241.3 |
240.0 |
O3 |
C3 |
C2 |
H3 |
115.6 |
120.1 |
C2 |
C3 |
O3 |
HO3 |
180.0 |
299.8 |
C5 |
C4 |
O4 |
H4 |
116.9 |
120.2 |
O4 |
C4 |
C3 |
O3 |
352.0 |
302.9 |
O4 |
C4 |
C3 |
H3 |
108.8 |
63.2 |
C2 |
C3 |
C4 |
O3 |
235.8 |
240.1 |
C2 |
C3 |
C4 |
H3 |
119.0 |
119.9 |
O3 |
C3 |
C4 |
H3 |
243.2 |
239.8 |
C4 |
C3 |
O3 |
HO3 |
51.7 |
180.2 |
C2 |
C3 |
O3 |
H3 |
244.6 |
239.9 |
C4 |
C3 |
O3 |
H3 |
116.3 |
120.3 |
C2 |
C3 |
H3 |
O3 |
116.3 |
120.1 |
C4 |
C3 |
H3 |
O3 |
240.7 |
239.8 |
H3 |
C3 |
O3 |
HO3 |
295.4 |
59.9 |
C1 |
C2 |
H2 |
O2 |
238.2 |
239.8 |
H2 |
C2 |
O2 |
HO2 |
62.5 |
300.0 |
H2 |
C2 |
C3 |
O3 |
322.5 |
57.1 |
H2 |
C2 |
C3 |
H3 |
206.9 |
297.0 |
C5 |
C4 |
H4 |
O4 |
240.7 |
239.9 |
H4 |
C4 |
O4 |
HO4 |
63.1 |
60.2 |
H4 |
C4 |
C3 |
O3 |
234.4 |
182.8 |
H4 |
C4 |
C3 |
H3 |
351.2 |
303.1 |
H5 |
C5 |
C4 |
O4 |
68.2 |
57.5 |
H5 |
C5 |
C4 |
H4 |
185.6 |
177.7 |
O6 |
C6 |
H61 |
H62 |
116.9 |
240.0 |
H61 |
C6 |
C5 |
H5 |
227.5 |
174.9 |
O6 |
C6 |
H62 |
H61 |
243.1 |
120.0 |
H62 |
C6 |
C5 |
H5 |
109.5 |
294.9 |
H1 |
C1 |
C2 |
O2 |
22.9 |
302.3 |
H1 |
C1 |
C2 |
H2 |
140.9 |
62.5 |
H8 |
OAC |
CAN |
CAP |
180.1 |
180.0 |
H9 |
CAJ |
CAP |
CAO |
180.0 |
180.3 |
H9 |
CAJ |
CAH |
CAG |
180.0 |
180.0 |
H9 |
CAJ |
CAH |
H10 |
360.0 |
0.0 |
CAJ |
CAH |
H10 |
CAG |
180.0 |
180.0 |
H10 |
CAH |
CAJ |
H9 |
360.0 |
0.0 |
H10 |
CAH |
CAG |
CAI |
180.1 |
180.0 |
H10 |
CAH |
CAG |
H11 |
0.0 |
359.9 |
CAH |
CAG |
H11 |
CAI |
180.0 |
180.1 |
H11 |
CAG |
CAH |
H10 |
0.0 |
359.9 |
H11 |
CAG |
CAI |
H12 |
359.9 |
360.0 |
H12 |
CAI |
CAG |
H11 |
359.9 |
360.0 |
HO6 |
O6 |
C6 |
H61 |
301.0 |
59.9 |
HO6 |
O6 |
C6 |
H62 |
59.0 |
299.9 |
HO4 |
O4 |
C4 |
H4 |
63.1 |
60.2 |
HO3 |
O3 |
C3 |
H3 |
295.4 |
59.9 |
HO2 |
O2 |
C2 |
H2 |
62.5 |
300.0 |