PDB Chemical Component 6EU

Ideal Model

Chemical Description

Name resiniferatoxin
Synonyms RTX
Formula C37 H40 O9
Formal charge 0
Molecular weight 628.708 g/mol
Component type NON-POLYMER

Chemical features

Atom count 86
Chiral atom count 8
Chiral atoms CAK CAR CAO CAJ CAN CAM CAL CAQ
Bond count 92
Aromatic bond count 12

Chemical Identifiers

Systematic name (ACDLabs) [(2S,3aR,3bS,6aR,9aR,9bR,10R,11aR)-2-benzyl-6a-hydroxy-8,10-dimethyl-7-oxo-11a-(prop-1-en-2-yl)-3a,6,6a,7,9a,10,11,11a-octahydro-2H,3bH-2,9b-epoxyazuleno[4',5':5,6]benzo[1,2-d][1,3]dioxol-5-yl]methyl (4-hydroxy-3-methoxyphenyl)acetate

Chemical Descriptors

Stereo SMILES (CACTVS) COc1cc(CC(=O)OCC2=C[C@H]3[C@H]4O[C@]5(Cc6ccccc6)O[C@]4(C[C@@H](C)[C@]3(O5)[C@@H]7C=C(C)C(=O)[C@@]7(O)C2)C(C)=C)ccc1O
SMILES (CACTVS) COc1cc(CC(=O)OCC2=C[CH]3[CH]4O[C]5(Cc6ccccc6)O[C]4(C[CH](C)[C]3(O5)[CH]7C=C(C)C(=O)[C]7(O)C2)C(C)=C)ccc1O
Stereo SMILES (OpenEye) C[C@@H]1C[C@]2([C@H]3[C@H]4[C@]1([C@@H]5C=C(C(=O)[C@]5(CC(=C4)COC(=O)Cc6ccc(c(c6)OC)O)O)C)O[C@](O3)(O2)Cc7ccccc7)C(=C)C
InChI descriptor InChI=1S/C37H40O9/c1-21(2)35-17-23(4)37-27(33(35)44-36(45-35,46-37)19-24-9-7-6-8-10-24)14-26(18-34(41)30(37)13-22(3)32(34)40)20-43-31(39)16-25-11-12-28(38)29(15-25)42-5/h6-15,23,27,30,33,38,41H,1,16-20H2,2-5H3/t23-,27+,30-,33-,34-,35-,36-,37-/m1/s1
InChIKey descriptor DSDNAKHZNJAGHN-MXTYGGKSSA-N

Status Information

Last modified 2021-03-01
Created 2016-03-23
Release status REL
Model PDB code 5IRX
Processing site RCSB