PDB Chemical Component 6DE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for 6DE

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
O14	C13	1.224	1.215
C13	O15	1.348	1.347
C13	C12	1.511	1.473
O15	C16	1.445	1.451
C16	C17	1.545	1.529
C16	H161	1.115	1.090
C16	H162	1.116	1.089
C17	H171	1.115	1.090
C17	H172	1.115	1.090
C17	H173	1.116	1.090
C12	C18	1.399	1.381
C12	C10	1.404	1.414
C18	C19	1.531	1.507
C18	N1	1.473	1.343
C19	H191	1.115	1.090
C19	H192	1.115	1.090
C19	H193	1.115	1.090
C10	C11	1.528	1.507
C10	N9	1.352	1.304
C11	H111	1.115	1.091
C11	H112	1.115	1.090
C11	H113	1.115	1.090
N9	N1	1.488	1.400
N1	C2	1.356	1.401
C2	C3	1.384	1.389
C2	C8	1.399	1.389
C3	CL4	1.736	1.736
C3	C5	1.395	1.382
C5	C6	1.391	1.383
C5	H5	1.104	1.080
C6	C7	1.400	1.383
C6	H6	1.103	1.081
C7	C8	1.400	1.381
C7	H7	1.103	1.080
C8	H8	1.103	1.080

Bond Angles for 6DE

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O14	C13	O15	123.7	120.0
O14	C13	C12	118.8	120.0
O15	C13	C12	117.5	120.0
C13	O15	C16	119.5	120.1
C13	C12	C18	125.4	126.5
C13	C12	C10	126.6	126.4
O15	C16	C17	108.4	109.5
O15	C16	H161	112.6	109.5
O15	C16	H162	112.6	109.5
C17	C16	H161	112.6	109.5
C17	C16	H162	112.6	109.4
C16	C17	H171	112.6	109.5
C16	C17	H172	108.4	109.5
C16	C17	H173	112.6	109.5
H161	C16	H162	97.8	109.5
H171	C17	H172	112.6	109.4
H171	C17	H173	97.8	109.5
H172	C17	H173	112.6	109.5
C18	C12	C10	108.0	107.1
C12	C18	C19	128.4	126.3
C12	C18	N1	106.1	107.4
C12	C10	C11	125.4	126.0
C12	C10	N9	114.1	108.0
C19	C18	N1	125.5	126.3
C18	C19	H191	105.6	109.4
C18	C19	H192	128.4	109.5
C18	C19	H193	105.6	109.5
C18	N1	N9	107.6	108.5
C18	N1	C2	128.5	125.8
H191	C19	H192	105.6	109.5
H191	C19	H193	103.7	109.5
H192	C19	H193	105.6	109.4
C11	C10	N9	120.5	126.0
C10	C11	H111	106.6	109.4
C10	C11	H112	125.4	109.5
C10	C11	H113	106.6	109.5
C10	N9	N1	104.2	108.9
H111	C11	H112	106.6	109.5
H111	C11	H113	102.9	109.5
H112	C11	H113	106.6	109.5
N9	N1	C2	123.9	125.7
N1	C2	C3	119.1	120.2
N1	C2	C8	121.9	120.1
C3	C2	C8	119.0	119.8
C2	C3	CL4	117.2	120.0
C2	C3	C5	121.8	120.0
C2	C8	C7	120.0	120.0
C2	C8	H8	120.0	120.0
CL4	C3	C5	121.0	120.1
C3	C5	C6	119.2	120.0
C3	C5	H5	120.6	120.0
C6	C5	H5	120.2	119.9
C5	C6	C7	120.0	120.2
C5	C6	H6	119.7	119.9
C7	C6	H6	120.3	120.0
C6	C7	C8	120.1	120.1
C6	C7	H7	119.9	120.0
C8	C7	H7	119.9	120.0
C7	C8	H8	120.0	120.0

Torsion Angles for 6DE

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O15	C13	O14	C12	180.4	180.0
O14	C13	O15	C16	340.4	360.0
O14	C13	C12	C18	159.8	269.8
O14	C13	C12	C10	339.7	89.9
O14	C13	O15	C12	179.6	180.0
O15	C13	C12	C18	339.4	89.7
O15	C13	C12	C10	159.3	269.9
C13	O15	C16	C17	215.4	180.0
C13	O15	C16	H161	90.1	60.0
C13	O15	C16	H162	340.7	300.0
O14	C13	C12	O15	180.4	180.0
C12	C13	O15	C16	160.9	180.0
C18	C12	C13	C10	180.2	179.8
C13	C12	C18	C19	359.7	0.2
C13	C12	C18	N1	180.4	179.8
C13	C12	C10	C11	0.1	0.1
C13	C12	C10	N9	180.0	180.0
C16	O15	C13	C12	160.9	180.0
C17	C16	O15	H161	125.3	120.0
C17	C16	O15	H162	234.7	240.0
O15	C16	C17	H171	54.7	180.1
O15	C16	C17	H172	180.0	300.0
O15	C16	C17	H173	305.3	60.0
H161	C16	O15	H162	109.5	120.0
O15	C16	C17	H161	234.7	240.0
O15	C16	C17	H162	125.3	120.0
H161	C16	C17	H162	250.6	240.0
H171	C17	C16	H172	234.7	240.1
H171	C17	C16	H173	109.4	120.0
H172	C17	C16	H173	234.7	239.9
O15	C16	H161	C17	123.0	120.0
O15	C16	H161	H162	241.5	240.0
C17	C16	H161	H162	118.5	119.9
H161	C16	C17	H171	180.0	300.1
H161	C16	C17	H172	305.3	60.0
H161	C16	C17	H173	70.6	180.0
O15	C16	H162	C17	237.0	240.0
O15	C16	H162	H161	118.5	120.0
C17	C16	H162	H161	241.5	240.0
H162	C16	C17	H171	289.4	60.0
H162	C16	C17	H172	54.7	179.9
H162	C16	C17	H173	180.0	300.0
H171	C17	C16	H161	180.0	300.1
H171	C17	C16	H162	289.4	60.0
C16	C17	H171	H172	123.0	120.0
C16	C17	H171	H173	241.5	240.0
H172	C17	H171	H173	118.5	120.0
H172	C17	C16	H161	305.3	60.0
H172	C17	C16	H162	54.7	179.9
C16	C17	H172	H171	234.7	240.0
C16	C17	H172	H173	125.3	120.1
H171	C17	H172	H173	250.5	240.0
H173	C17	C16	H161	70.6	180.0
H173	C17	C16	H162	180.0	300.0
C16	C17	H173	H171	118.5	120.0
C16	C17	H173	H172	237.0	240.0
H171	C17	H173	H172	118.5	119.9
C13	C12	C18	C10	179.9	180.2
C18	C12	C10	C11	180.0	180.3
C18	C12	C10	N9	359.9	0.2
C19	C18	C12	N1	179.3	180.4
C12	C18	C19	H191	54.7	264.5
C12	C18	C19	H192	180.0	24.5
C12	C18	C19	H193	305.3	144.5
C12	C18	N1	N9	359.2	0.5
C12	C18	N1	C2	180.2	180.2
C13	C12	C10	C18	180.1	179.8
C10	C12	C18	C19	179.9	180.0
C10	C12	C18	N1	0.5	359.6
C11	C10	C12	N9	180.1	180.1
C12	C10	C11	H111	54.7	90.0
C12	C10	C11	H112	180.0	209.9
C12	C10	C11	H113	305.3	330.0
C12	C10	N9	N1	359.6	0.1
C19	C18	C12	C10	179.9	180.0
C12	C18	C19	N1	180.8	179.5
C19	C18	N1	N9	179.9	180.0
C19	C18	N1	C2	0.8	359.7
H191	C19	C18	H192	234.7	239.9
H191	C19	C18	H193	109.5	120.0
H192	C19	C18	H193	234.7	240.0
N1	C18	C12	C10	0.5	359.6
C12	C18	N1	C19	179.3	180.4
N1	C18	C19	H191	233.9	85.0
N1	C18	C19	H192	359.2	205.0
N1	C18	C19	H193	124.5	325.0
C10	N9	N1	C18	0.7	359.6
N9	N1	C18	C2	179.0	180.3
C18	N1	C2	C3	87.5	132.1
C18	N1	C2	C8	266.7	312.4
H191	C19	C18	N1	233.9	85.0
C18	C19	H191	H192	138.4	120.0
C18	C19	H191	H193	249.2	240.0
H192	C19	H191	H193	110.8	120.0
H192	C19	C18	N1	359.2	205.0
C18	C19	H192	H191	234.7	240.0
C18	C19	H192	H193	125.3	120.0
H191	C19	H192	H193	250.6	240.0
H193	C19	C18	N1	124.5	325.0
C18	C19	H193	H191	110.8	120.0
C18	C19	H193	H192	221.6	240.0
H191	C19	H193	H192	110.8	120.0
C12	C10	C11	N9	179.9	179.9
C11	C10	N9	N1	179.5	180.0
H111	C11	C10	H112	234.7	240.0
H111	C11	C10	H113	109.4	119.9
H112	C11	C10	H113	234.7	239.9
C12	C10	N9	C11	180.1	180.1
C18	N1	N9	C10	0.7	359.6
N9	C10	C11	H111	234.8	270.1
N9	C10	C11	H112	0.1	30.0
N9	C10	C11	H113	125.4	150.1
C10	N9	N1	C2	179.8	179.9
H111	C11	C10	N9	234.8	270.1
C10	C11	H111	H112	136.0	120.0
C10	C11	H111	H113	248.0	240.1
H112	C11	H111	H113	112.0	120.1
H112	C11	C10	N9	0.1	30.0
C10	C11	H112	H111	234.7	240.1
C10	C11	H112	H113	125.3	120.0
H111	C11	H112	H113	250.6	240.0
H113	C11	C10	N9	125.4	150.1
C10	C11	H113	H111	112.0	119.9
C10	C11	H113	H112	224.0	239.9
H111	C11	H113	H112	112.0	120.0
C18	N1	N9	C2	180.9	179.7
N9	N1	C2	C3	268.6	311.8
N9	N1	C2	C8	87.8	132.0
C18	N1	C2	N9	178.9	180.3
C3	C2	N1	C8	180.8	179.8
N1	C2	C3	CL4	359.4	0.2
N1	C2	C3	C5	179.5	179.7
N1	C2	C8	C7	180.6	180.0
N1	C2	C8	H8	0.5	0.0
N1	C2	C3	C8	179.2	180.2
C3	C2	C8	C7	359.8	0.2
C3	C2	C8	H8	179.7	180.2
CL4	C3	C2	C5	180.0	180.5
C2	C3	C5	C6	359.8	0.6
C2	C3	C5	H5	179.8	180.2
N1	C2	C8	C3	180.8	179.8
C8	C2	C3	CL4	180.2	180.0
C8	C2	C3	C5	0.3	359.5
C6	C7	C8	C2	0.2	0.1
C2	C8	C7	H7	180.2	180.0
C7	C8	C2	H8	180.0	179.9
CL4	C3	C2	C8	180.2	180.0
C2	C3	CL4	C5	180.0	179.5
CL4	C3	C5	C6	179.8	180.1
CL4	C3	C5	H5	359.8	359.7
C5	C3	C2	C8	0.3	359.5
C2	C3	C5	CL4	180.0	180.5
C6	C5	C3	H5	180.0	180.3
C3	C5	C6	C7	0.1	359.7
C3	C5	C6	H6	180.1	179.8
C3	C5	C6	H5	180.0	179.7
C7	C6	C5	H6	180.0	179.9
C5	C6	C7	C8	359.9	360.0
C5	C6	C7	H7	179.9	180.1
C3	C5	H5	C6	180.0	180.3
H5	C5	C6	C7	180.1	180.0
H5	C5	C6	H6	0.1	0.1
C2	C8	C7	C6	0.2	0.1
C7	C6	C5	H5	180.1	180.0
C5	C6	C7	H6	180.0	180.1
C8	C7	C6	H7	180.0	179.9
C6	C7	C8	H8	180.2	180.0
H6	C6	C5	H5	0.1	0.1
C5	C6	H6	C7	180.0	179.9
H6	C6	C7	C8	179.9	179.9
H6	C6	C7	H7	359.9	360.0
C2	C8	C7	H8	180.0	180.1
C8	C7	C6	H6	179.9	179.9
C6	C7	C8	H7	180.0	180.1
H7	C7	C6	H6	359.9	360.0
C6	C7	H7	C8	180.0	179.9
H7	C7	C8	H8	0.2	360.0
C2	C8	H8	C7	180.0	179.9
H8	C8	C7	H7	0.2	360.0