PDB Chemical Component 6CB
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6CB
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
C5 |
1.359 |
1.390 |
| N1 |
C5 |
1.357 |
1.324 |
| N1 |
C1 |
1.346 |
1.321 |
| C20 |
C19 |
1.380 |
1.383 |
| C20 |
C21 |
1.384 |
1.383 |
| C |
C1 |
1.497 |
1.507 |
| C5 |
C4 |
1.400 |
1.389 |
| C19 |
C18 |
1.386 |
1.379 |
| C1 |
C2 |
1.384 |
1.378 |
| C21 |
C22 |
1.378 |
1.382 |
| C4 |
C3 |
1.392 |
1.395 |
| C2 |
C3 |
1.393 |
1.400 |
| C18 |
C17 |
1.401 |
1.394 |
| C22 |
C17 |
1.395 |
1.395 |
| C22 |
F |
1.350 |
1.352 |
| C3 |
C6 |
1.491 |
1.483 |
| C17 |
C13 |
1.490 |
1.483 |
| C7 |
C6 |
1.394 |
1.397 |
| C7 |
C8 |
1.378 |
1.380 |
| C6 |
C10 |
1.407 |
1.404 |
| C13 |
N4 |
1.346 |
1.322 |
| C13 |
C14 |
1.391 |
1.399 |
| N4 |
C12 |
1.349 |
1.327 |
| C8 |
N2 |
1.330 |
1.320 |
| C10 |
N3 |
1.421 |
1.397 |
| C10 |
C9 |
1.395 |
1.388 |
| N3 |
C11 |
1.353 |
1.347 |
| C14 |
C15 |
1.382 |
1.379 |
| N2 |
C9 |
1.334 |
1.317 |
| C12 |
C11 |
1.502 |
1.477 |
| C12 |
C16 |
1.424 |
1.401 |
| C11 |
O |
1.229 |
1.216 |
| C15 |
C16 |
1.397 |
1.397 |
| C16 |
N5 |
1.386 |
1.388 |
| C2 |
H3 |
1.080 |
1.079 |
| C14 |
H11 |
1.080 |
1.081 |
| C15 |
H12 |
1.080 |
1.080 |
| C18 |
H15 |
1.080 |
1.080 |
| C19 |
H16 |
1.080 |
1.080 |
| C20 |
H17 |
1.080 |
1.080 |
| C21 |
H18 |
1.080 |
1.080 |
| N5 |
H13 |
1.000 |
0.969 |
| N5 |
H14 |
1.000 |
0.970 |
| N3 |
H10 |
1.000 |
0.970 |
| C9 |
H9 |
1.080 |
1.080 |
| C8 |
H8 |
1.080 |
1.079 |
| C7 |
H7 |
1.080 |
1.080 |
| C4 |
H4 |
1.080 |
1.081 |
| N |
H6 |
1.000 |
0.970 |
| N |
H5 |
1.000 |
0.970 |
| C |
H1 |
1.099 |
1.090 |
| C |
H |
1.100 |
1.090 |
| C |
H2 |
1.100 |
1.090 |
Bond Angles for 6CB
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C20 |
C19 |
H16 |
119.9 |
119.9 |
| C20 |
C21 |
C22 |
118.6 |
120.1 |
| C21 |
C20 |
H17 |
119.8 |
119.8 |
| C20 |
C21 |
H18 |
120.7 |
119.9 |
| C5 |
C4 |
H4 |
120.6 |
120.5 |
| C19 |
C18 |
H15 |
119.5 |
120.1 |
| C1 |
C2 |
C3 |
120.2 |
119.1 |
| C1 |
C2 |
H3 |
119.9 |
120.4 |
| C21 |
C22 |
F |
117.7 |
120.1 |
| C22 |
C21 |
H18 |
120.7 |
120.0 |
| C2 |
C3 |
C6 |
121.1 |
120.8 |
| C3 |
C2 |
H3 |
119.9 |
120.4 |
| C3 |
C6 |
C7 |
118.2 |
121.0 |
| C3 |
C6 |
C10 |
123.5 |
120.9 |
| C17 |
C13 |
N4 |
115.9 |
119.5 |
| C6 |
C7 |
H7 |
120.6 |
120.4 |
| C7 |
C8 |
H8 |
118.0 |
119.5 |
| C14 |
C13 |
N4 |
121.6 |
120.9 |
| C13 |
C14 |
C15 |
119.0 |
119.4 |
| C13 |
C14 |
H11 |
120.5 |
120.2 |
| C10 |
N3 |
H10 |
115.5 |
120.0 |
| C10 |
C9 |
H9 |
117.8 |
119.6 |
| C14 |
C15 |
C16 |
121.3 |
118.5 |
| C15 |
C14 |
H11 |
120.5 |
120.3 |
| C14 |
C15 |
H12 |
119.3 |
120.7 |
| N2 |
C9 |
H9 |
117.8 |
119.6 |
| C12 |
C11 |
O |
121.5 |
120.0 |
| C12 |
C16 |
C15 |
115.7 |
119.0 |
| C12 |
C16 |
N5 |
124.1 |
120.5 |
| C15 |
C16 |
N5 |
120.2 |
120.5 |
| C16 |
C15 |
H12 |
119.3 |
120.8 |
| C16 |
N5 |
H13 |
109.5 |
120.0 |
| C16 |
N5 |
H14 |
109.4 |
120.0 |
| H13 |
N5 |
H14 |
109.5 |
120.0 |
| H6 |
N |
H5 |
109.4 |
120.0 |
| H1 |
C |
H |
109.5 |
109.5 |
| H1 |
C |
H2 |
109.5 |
109.5 |
| H |
C |
H2 |
109.5 |
109.5 |
Torsion Angles for 6CB
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N |
C5 |
C4 |
H4 |
354.7 |
0.1 |
| N1 |
C5 |
C4 |
H4 |
178.6 |
180.1 |
| N1 |
C1 |
C2 |
H3 |
181.5 |
180.0 |
| C20 |
C19 |
C18 |
H15 |
179.8 |
180.1 |
| C21 |
C20 |
C19 |
H16 |
180.2 |
180.0 |
| C20 |
C21 |
C22 |
F |
182.7 |
180.0 |
| C22 |
C21 |
C20 |
H18 |
180.0 |
179.7 |
| C |
C1 |
C2 |
H3 |
5.1 |
359.7 |
| C1 |
C2 |
C3 |
C6 |
178.3 |
180.0 |
| C3 |
C2 |
C1 |
H3 |
180.0 |
180.0 |
| C22 |
C21 |
C20 |
H17 |
179.1 |
179.7 |
| C20 |
C21 |
C22 |
H18 |
180.0 |
180.3 |
| C4 |
C3 |
C2 |
H3 |
179.0 |
180.0 |
| C1 |
C2 |
C3 |
H3 |
180.0 |
180.0 |
| C2 |
C3 |
C6 |
C7 |
126.0 |
310.1 |
| C2 |
C3 |
C6 |
C10 |
309.7 |
129.5 |
| C18 |
C17 |
C13 |
N4 |
329.5 |
132.0 |
| C22 |
C17 |
C13 |
N4 |
152.2 |
311.8 |
| F |
C22 |
C21 |
H18 |
2.6 |
359.7 |
| C6 |
C3 |
C2 |
H3 |
358.3 |
360.0 |
| C3 |
C6 |
C7 |
H7 |
5.4 |
359.5 |
| C14 |
C13 |
C17 |
N4 |
174.3 |
180.0 |
| C17 |
C13 |
C14 |
H11 |
6.0 |
0.0 |
| C3 |
C6 |
C7 |
C10 |
183.5 |
179.5 |
| C6 |
C7 |
C8 |
H8 |
180.4 |
179.8 |
| C3 |
C6 |
C7 |
C8 |
185.4 |
180.0 |
| C3 |
C6 |
C10 |
C7 |
176.3 |
180.5 |
| C6 |
C10 |
N3 |
H10 |
24.9 |
331.4 |
| C6 |
C10 |
C9 |
H9 |
182.1 |
180.3 |
| N4 |
C13 |
C14 |
C15 |
0.0 |
0.3 |
| N4 |
C13 |
C14 |
H11 |
180.0 |
180.0 |
| C17 |
C13 |
C14 |
N4 |
186.0 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
0.8 |
359.8 |
| C15 |
C14 |
C13 |
H11 |
180.0 |
180.3 |
| C13 |
C14 |
C15 |
H12 |
180.8 |
180.0 |
| N4 |
C12 |
C11 |
O |
172.4 |
174.3 |
| N4 |
C12 |
C16 |
N5 |
181.3 |
180.2 |
| C8 |
N2 |
C9 |
H9 |
180.2 |
180.0 |
| C3 |
C6 |
C10 |
N3 |
347.8 |
0.3 |
| C3 |
C6 |
C10 |
C9 |
173.3 |
180.0 |
| C9 |
C10 |
N3 |
H10 |
199.1 |
151.7 |
| N2 |
C9 |
C10 |
H9 |
180.0 |
180.0 |
| C15 |
C14 |
C13 |
N4 |
0.0 |
0.3 |
| C13 |
C14 |
C15 |
H11 |
180.0 |
179.7 |
| C12 |
C16 |
C15 |
C14 |
359.7 |
360.0 |
| C14 |
C15 |
C16 |
N5 |
177.5 |
180.0 |
| C16 |
C15 |
C14 |
H12 |
180.0 |
179.8 |
| C10 |
C9 |
N2 |
H9 |
180.0 |
180.0 |
| C14 |
C15 |
C16 |
C12 |
359.7 |
360.0 |
| C16 |
C12 |
C11 |
O |
355.0 |
354.6 |
| C15 |
C16 |
C12 |
N5 |
177.7 |
180.0 |
| C12 |
C16 |
C15 |
H12 |
179.7 |
179.8 |
| C12 |
C16 |
N5 |
H13 |
180.0 |
349.2 |
| C12 |
C16 |
N5 |
H14 |
300.0 |
169.3 |
| C16 |
C15 |
C14 |
H11 |
180.8 |
180.1 |
| C14 |
C15 |
C16 |
H12 |
180.0 |
180.2 |
| C12 |
C16 |
C15 |
N5 |
182.2 |
180.0 |
| C15 |
C16 |
N5 |
H13 |
2.4 |
169.2 |
| C15 |
C16 |
N5 |
H14 |
122.4 |
349.2 |
| C12 |
C16 |
N5 |
C15 |
177.6 |
180.0 |
| N5 |
C16 |
C15 |
H12 |
357.5 |
359.8 |
| H13 |
N5 |
C16 |
H14 |
240.0 |
180.0 |
| C1 |
C2 |
H3 |
C3 |
180.0 |
180.0 |
| H3 |
C2 |
C3 |
C6 |
358.3 |
360.0 |
| H11 |
C14 |
C13 |
N4 |
180.0 |
180.0 |
| C13 |
C14 |
H11 |
C15 |
180.0 |
180.3 |
| H11 |
C14 |
C15 |
C16 |
180.8 |
180.1 |
| H11 |
C14 |
C15 |
H12 |
0.8 |
0.3 |
| C14 |
C15 |
H12 |
C16 |
180.0 |
179.8 |
| H12 |
C15 |
C14 |
H11 |
0.8 |
0.3 |
| H12 |
C15 |
C16 |
N5 |
357.5 |
359.8 |
| H16 |
C19 |
C18 |
H15 |
359.8 |
0.0 |
| H17 |
C20 |
C19 |
H16 |
0.2 |
0.1 |
| H17 |
C20 |
C21 |
C22 |
179.1 |
179.7 |
| H17 |
C20 |
C21 |
H18 |
359.1 |
359.9 |
| C20 |
C21 |
H18 |
C22 |
180.0 |
179.7 |
| H18 |
C21 |
C20 |
H17 |
359.1 |
359.9 |
| H18 |
C21 |
C22 |
F |
2.6 |
359.7 |
| C16 |
N5 |
H13 |
H14 |
120.0 |
180.0 |
| C16 |
N5 |
H14 |
H13 |
240.0 |
180.0 |
| H7 |
C7 |
C8 |
H8 |
0.4 |
0.3 |
| H |
C |
H1 |
H2 |
120.0 |
120.0 |
| H1 |
C |
H |
H2 |
240.0 |
240.0 |
| H1 |
C |
H2 |
H |
120.0 |
120.0 |