PDB Chemical Component 6C2
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for 6C2
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O6A |
C6 |
1.251 |
1.208 |
C9 |
O1 |
1.426 |
1.429 |
O6B |
C6 |
1.250 |
1.343 |
C6 |
C5 |
1.501 |
1.507 |
O5 |
C5 |
1.423 |
1.429 |
O5 |
C1 |
1.422 |
1.430 |
C5 |
C4 |
1.526 |
1.532 |
O1 |
C1 |
1.426 |
1.428 |
C1 |
C2 |
1.527 |
1.531 |
C4 |
O4 |
1.426 |
1.428 |
C4 |
C3 |
1.527 |
1.532 |
C2 |
C3 |
1.529 |
1.532 |
C2 |
N2 |
1.452 |
1.465 |
C3 |
O3 |
1.434 |
1.429 |
N2 |
C7 |
1.333 |
1.348 |
C8 |
C7 |
1.498 |
1.507 |
C7 |
O7 |
1.221 |
1.213 |
C1 |
H1 |
1.100 |
1.090 |
C5 |
H5 |
1.100 |
1.090 |
O6B |
HO6B |
0.950 |
0.967 |
C4 |
H4 |
1.100 |
1.090 |
C3 |
H3 |
1.100 |
1.090 |
O3 |
HO3 |
0.950 |
0.967 |
C2 |
H2 |
1.100 |
1.089 |
N2 |
H19 |
1.000 |
0.970 |
C8 |
H20 |
1.100 |
1.090 |
C8 |
H21 |
1.100 |
1.091 |
C8 |
H22 |
1.100 |
1.091 |
C9 |
H23 |
1.100 |
1.090 |
C9 |
H24 |
1.100 |
1.090 |
C9 |
H25 |
1.099 |
1.090 |
O4 |
HO4 |
0.950 |
0.967 |
Bond Angles for 6C2
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C5 |
C4 |
111.2 |
109.5 |
C6 |
C5 |
H5 |
108.7 |
109.5 |
O5 |
C5 |
C4 |
109.6 |
109.4 |
O5 |
C5 |
H5 |
109.8 |
109.5 |
O5 |
C1 |
C2 |
109.4 |
109.4 |
O5 |
C1 |
H1 |
109.9 |
109.5 |
C5 |
C4 |
C3 |
111.3 |
109.2 |
C4 |
C5 |
H5 |
108.4 |
109.5 |
C5 |
C4 |
H4 |
109.5 |
109.5 |
O1 |
C1 |
C2 |
110.1 |
109.5 |
O1 |
C1 |
H1 |
109.9 |
109.5 |
C1 |
C2 |
C3 |
112.1 |
109.2 |
C1 |
C2 |
N2 |
109.3 |
109.5 |
C2 |
C1 |
H1 |
108.5 |
109.5 |
C1 |
C2 |
H2 |
108.9 |
109.6 |
C4 |
O4 |
HO4 |
109.5 |
114.0 |
C4 |
C3 |
O3 |
109.0 |
109.5 |
C3 |
C4 |
H4 |
109.5 |
109.6 |
C4 |
C3 |
H3 |
107.7 |
109.6 |
C2 |
C3 |
H3 |
107.6 |
109.6 |
C2 |
N2 |
C7 |
124.4 |
120.0 |
N2 |
C2 |
H2 |
109.9 |
109.6 |
C2 |
N2 |
H19 |
117.8 |
120.0 |
O3 |
C3 |
H3 |
108.8 |
109.6 |
C3 |
O3 |
HO3 |
109.5 |
114.0 |
N2 |
C7 |
O7 |
121.8 |
120.0 |
C7 |
N2 |
H19 |
117.8 |
120.0 |
C8 |
C7 |
O7 |
121.7 |
120.0 |
H20 |
C8 |
H21 |
109.4 |
109.5 |
H20 |
C8 |
H22 |
109.5 |
109.5 |
H21 |
C8 |
H22 |
109.5 |
109.4 |
H23 |
C9 |
H24 |
109.5 |
109.5 |
H23 |
C9 |
H25 |
109.4 |
109.5 |
H24 |
C9 |
H25 |
109.4 |
109.5 |
Torsion Angles for 6C2
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O6A |
C6 |
C5 |
H5 |
31.2 |
235.0 |
C9 |
O1 |
C1 |
H1 |
52.3 |
55.0 |
O6B |
C6 |
C5 |
C4 |
91.8 |
294.9 |
O6B |
C6 |
C5 |
H5 |
211.0 |
55.0 |
O5 |
C5 |
C6 |
C4 |
238.9 |
240.1 |
O5 |
C5 |
C6 |
H5 |
119.7 |
120.1 |
C6 |
C5 |
C4 |
C3 |
186.2 |
182.4 |
C4 |
C5 |
C6 |
H5 |
240.8 |
239.9 |
C6 |
C5 |
C4 |
H4 |
307.4 |
302.4 |
C6 |
C5 |
O5 |
C4 |
122.1 |
119.9 |
C6 |
C5 |
O5 |
H5 |
241.0 |
239.9 |
C5 |
O5 |
C1 |
C2 |
292.1 |
298.8 |
C5 |
O5 |
C1 |
H1 |
51.0 |
58.7 |
O5 |
C5 |
C4 |
C3 |
307.1 |
302.4 |
C4 |
C5 |
O5 |
H5 |
118.9 |
120.0 |
O5 |
C5 |
C4 |
H4 |
68.2 |
62.3 |
O1 |
C1 |
O5 |
C2 |
239.5 |
240.0 |
O1 |
C1 |
O5 |
H1 |
120.5 |
120.1 |
O5 |
C1 |
C2 |
C3 |
51.5 |
57.6 |
O5 |
C1 |
C2 |
N2 |
170.9 |
177.5 |
C2 |
C1 |
O5 |
H1 |
241.1 |
240.0 |
O5 |
C1 |
C2 |
H2 |
291.0 |
297.7 |
C6 |
C5 |
C4 |
H5 |
119.4 |
120.1 |
O5 |
C5 |
C4 |
H5 |
240.2 |
240.0 |
C5 |
C4 |
O4 |
HO4 |
180.0 |
300.0 |
C5 |
C4 |
C3 |
O3 |
162.0 |
176.8 |
C3 |
C4 |
C5 |
H4 |
238.9 |
240.0 |
C5 |
C4 |
C3 |
H3 |
279.9 |
297.1 |
O5 |
C1 |
O1 |
C2 |
120.1 |
119.9 |
O5 |
C1 |
O1 |
H1 |
239.4 |
239.9 |
O1 |
C1 |
C2 |
C3 |
171.5 |
177.6 |
O1 |
C1 |
C2 |
N2 |
290.8 |
297.5 |
C2 |
C1 |
O1 |
H1 |
119.4 |
120.1 |
O1 |
C1 |
C2 |
H2 |
50.9 |
57.6 |
O5 |
C1 |
C2 |
H1 |
119.8 |
119.9 |
O1 |
C1 |
C2 |
H1 |
239.8 |
239.9 |
C1 |
C2 |
C3 |
H3 |
80.6 |
62.9 |
C1 |
C2 |
N2 |
C7 |
105.4 |
85.0 |
N2 |
C2 |
C1 |
H2 |
239.9 |
239.8 |
C1 |
C2 |
N2 |
H19 |
285.3 |
265.0 |
C3 |
C4 |
C5 |
H5 |
66.8 |
62.3 |
C5 |
C4 |
C3 |
H4 |
121.2 |
119.9 |
C1 |
C2 |
C3 |
C4 |
320.9 |
303.0 |
C3 |
C4 |
O4 |
HO4 |
59.7 |
180.3 |
C2 |
C3 |
C4 |
H3 |
119.6 |
119.9 |
O3 |
C3 |
C4 |
H3 |
242.1 |
239.8 |
C4 |
C3 |
O3 |
HO3 |
180.0 |
60.0 |
C1 |
C2 |
C3 |
N2 |
120.3 |
119.9 |
C3 |
C2 |
C1 |
H1 |
291.7 |
297.7 |
C1 |
C2 |
C3 |
H2 |
239.4 |
240.0 |
C2 |
C3 |
C4 |
H4 |
278.4 |
297.1 |
C4 |
C3 |
C2 |
H3 |
240.3 |
240.1 |
O3 |
C3 |
C2 |
H3 |
117.8 |
120.2 |
C2 |
C3 |
O3 |
HO3 |
305.8 |
179.5 |
C1 |
C2 |
N2 |
C3 |
237.9 |
240.4 |
N2 |
C2 |
C1 |
H1 |
51.1 |
57.6 |
C1 |
C2 |
N2 |
H2 |
119.5 |
120.2 |
N2 |
C2 |
C3 |
H3 |
320.3 |
303.1 |
C2 |
N2 |
C7 |
O7 |
162.3 |
360.0 |
C7 |
N2 |
C2 |
H19 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
O3 |
198.4 |
183.1 |
O3 |
C3 |
C4 |
H4 |
40.9 |
56.9 |
C4 |
C3 |
O3 |
H3 |
117.2 |
120.2 |
C2 |
C3 |
O3 |
H3 |
242.9 |
239.8 |
C7 |
N2 |
C2 |
H2 |
345.9 |
324.8 |
C2 |
N2 |
C7 |
H19 |
180.0 |
180.0 |
C8 |
C7 |
N2 |
O7 |
179.8 |
180.0 |
N2 |
C7 |
C8 |
O7 |
180.2 |
180.0 |
C8 |
C7 |
N2 |
H19 |
162.2 |
0.0 |
O7 |
C7 |
N2 |
H19 |
342.3 |
180.0 |
O5 |
C1 |
H1 |
C2 |
240.5 |
240.1 |
O1 |
C1 |
H1 |
C2 |
120.4 |
120.1 |
H1 |
C1 |
C2 |
C3 |
291.7 |
297.7 |
H1 |
C1 |
C2 |
N2 |
51.1 |
57.6 |
H1 |
C1 |
C2 |
H2 |
171.2 |
177.7 |
C6 |
C5 |
H5 |
C4 |
239.0 |
240.0 |
O5 |
C5 |
H5 |
C4 |
119.7 |
119.9 |
H5 |
C5 |
C4 |
C3 |
66.8 |
62.3 |
H5 |
C5 |
C4 |
H4 |
188.0 |
182.3 |
C5 |
C4 |
H4 |
C3 |
237.7 |
240.3 |
H4 |
C4 |
C5 |
H5 |
188.0 |
182.3 |
H4 |
C4 |
O4 |
HO4 |
300.6 |
60.1 |
H4 |
C4 |
C3 |
O3 |
40.9 |
56.9 |
H4 |
C4 |
C3 |
H3 |
158.7 |
177.1 |
C4 |
C3 |
H3 |
O3 |
242.0 |
239.8 |
H3 |
C3 |
C4 |
H4 |
158.7 |
177.1 |
H3 |
C3 |
O3 |
HO3 |
62.8 |
299.8 |
HO3 |
O3 |
C3 |
H3 |
62.8 |
299.8 |
C1 |
C2 |
H2 |
C3 |
122.5 |
119.7 |
C1 |
C2 |
H2 |
N2 |
240.3 |
239.9 |
H2 |
C2 |
C1 |
H1 |
171.2 |
177.7 |
H2 |
C2 |
C3 |
H3 |
201.1 |
182.9 |
H2 |
C2 |
N2 |
C7 |
345.9 |
324.8 |
H2 |
C2 |
N2 |
H19 |
165.9 |
144.8 |
C2 |
N2 |
H19 |
C7 |
180.0 |
180.0 |
H19 |
N2 |
C2 |
H2 |
165.9 |
144.8 |
H19 |
N2 |
C7 |
O7 |
342.3 |
180.0 |
H20 |
C8 |
C7 |
O7 |
0.0 |
180.0 |
H21 |
C8 |
H20 |
H22 |
120.0 |
120.0 |
H21 |
C8 |
C7 |
O7 |
120.0 |
300.0 |
H20 |
C8 |
H21 |
H22 |
240.0 |
240.0 |
H22 |
C8 |
C7 |
O7 |
240.0 |
60.0 |
H20 |
C8 |
H22 |
H21 |
120.0 |
120.0 |
H24 |
C9 |
H23 |
H25 |
120.0 |
120.0 |
H23 |
C9 |
H24 |
H25 |
240.0 |
239.9 |
H23 |
C9 |
H25 |
H24 |
120.0 |
120.0 |