PDB Chemical Component 6BQ

Ideal Model

Chemical Description

Name Phosphorylated josamycin
Synonyms (2S,3S,4R,6S)-6-{[(2R,3S,4S,5R,6S)-6-{[(4R,5S,6S,7R,9R,10S,12E,16R)-4-(acetyloxy)-10-hydroxy-7-(2-hydroxyethyl)-5-methoxy-9,16-dimethyl-2-oxo-1-oxacyclohexadec-12-en-6-yl]oxy}-4-(dimethylamino)-2-methyl-5-(phosphonooxy)tetrahydro-2H-pyran-3-yl]oxy}-4-hydroxy-2,4-dimethyltetrahydro-2H-pyran-3-yl 3-methylbutanoate
Formula C42 H74 N O18 P
Formal charge 0
Molecular weight 912.007 g/mol
Component type NON-POLYMER

Chemical features

Atom count 136
Chiral atom count 16
Chiral atoms C9 C15 C3 C4 C5 C6 C8 C1A C2A C3A C4A C5A C1B C3B C4B C5B
Bond count 138
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (2S,3S,4R,6S)-6-{[(2R,3S,4S,5R,6S)-6-{[(4R,5S,6S,7R,9R,10S,12E,16R)-4-(acetyloxy)-10-hydroxy-7-(2-hydroxyethyl)-5-methoxy-9,16-dimethyl-2-oxo-1-oxacyclohexadec-12-en-6-yl]oxy}-4-(dimethylamino)-2-methyl-5-(phosphonooxy)tetrahydro-2H-pyran-3-yl]oxy}-4-hydroxy-2,4-dimethyltetrahydro-2H-pyran-3-yl 3-methylbutanoate (non-preferred name)
Systematic name (OpenEye OEToolkits) [(2~{S},3~{S},4~{R},6~{S})-6-[(2~{R},3~{S},4~{S},5~{R},6~{S})-6-[[(4~{R},5~{S},6~{S},7~{R},9~{R},10~{S},12~{E},16~{R})-4-acetyloxy-7-(2-hydroxyethyl)-5-methoxy-9,16-dimethyl-10-oxidanyl-2-oxidanylidene-1-oxacyclohexadec-12-en-6-yl]oxy]-4-(dimethylamino)-2-methyl-5-phosphonooxy-oxan-3-yl]oxy-2,4-dimethyl-4-oxidanyl-oxan-3-yl] 3-methylbutanoate

Chemical Descriptors

Stereo SMILES (CACTVS) CO[C@H]1[C@@H](CC(=O)O[C@H](C)CC\C=C\C[C@H](O)[C@H](C)C[C@H](CCO)[C@@H]1O[C@@H]2O[C@H](C)[C@@H](O[C@H]3C[C@@](C)(O)[C@@H](OC(=O)CC(C)C)[C@H](C)O3)[C@@H]([C@H]2O[P](O)(O)=O)N(C)C)OC(C)=O
SMILES (CACTVS) CO[CH]1[CH](CC(=O)O[CH](C)CCC=CC[CH](O)[CH](C)C[CH](CCO)[CH]1O[CH]2O[CH](C)[CH](O[CH]3C[C](C)(O)[CH](OC(=O)CC(C)C)[CH](C)O3)[CH]([CH]2O[P](O)(O)=O)N(C)C)OC(C)=O
Stereo SMILES (OpenEye) C[C@@H]1CC/C=C/C[C@@H]([C@@H](C[C@@H]([C@@H]([C@H]([C@@H](CC(=O)O1)OC(=O)C)OC)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)C)O[C@H]3C[C@@]([C@H]([C@@H](O3)C)OC(=O)CC(C)C)(C)O)N(C)C)OP(=O)(O)O)CCO)C)O
InChI descriptor InChI=1S/C42H74NO18P/c1-23(2)19-32(47)58-40-27(6)55-34(22-42(40,8)49)59-36-26(5)56-41(39(35(36)43(9)10)61-62(50,51)52)60-37-29(17-18-44)20-24(3)30(46)16-14-12-13-15-25(4)54-33(48)21-31(38(37)53-11)57-28(7)45/h12,14,23-27,29-31,34-41,44,46,49H,13,15-22H2,1-11H3,(H2,50,51,52)/b14-12+/t24-,25-,26-,27+,29+,30+,31-,34+,35+,36-,37+,38+,39-,40+,41+,42-/m1/s1
InChIKey descriptor XJCOUSRBEGUHCU-HRSVSUKSSA-N

Status Information

Last modified 2021-03-13
Created 2016-03-02
Release status REL
Model PDB code 5IH1
Processing site RCSB